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Jong Bhak's Genomics Syllabus

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<td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;" width="547"> <p style="margin: 0cm 0cm 0pt;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;&#10; font-family:&quot;바탕&quot;,serif;mso-bidi-font-family:굴림;color:black;mso-font-kerning:&#10; 0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;</font></span></span><span lang="EN-US"><font size="2" face="맑은 고딕" size="2">What is life, information, and the universe?&nbsp; (as information processing objects)</font></span></p> <p align="left" style="margin: 0cm 0cm 0pt; text-align: left; text-indent: 5pt; word-break: keep-all; mso-pagination: widow-orphan; mso-char-indent-count: .5;" align="left"><span lang="EN-US"><font size="2" face="맑은 고딕" size="2">Introduction to the course.</font></span></p>
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<td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;" width="547"> <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0;"><span lang="EN-US"><font size="2" face="맑은 고딕" size="2">What is Sequencing in Genomics and Omics? (as an approach of understanding life)</font></span></p> <p align="left" style="margin: 0cm 0cm 0pt; text-align: left; text-indent: 5pt; word-break: keep-all; mso-pagination: widow-orphan; mso-char-indent-count: .5;" align="left"><span lang="EN-US"><font size="2" face="맑은 고딕" size="2">Sequencing<br style="mso-special-character:&#10; line-break" />
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<td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;" width="547"> <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0;"><span lang="EN-US"><font size="2" face="맑은 고딕" size="2">What is alignment, assembly, functional annotation for 'Big data' processing in biology?</font></span></p> <p align="left" style="margin: 0cm 0cm 0pt; text-align: left; text-indent: 25pt; word-break: keep-all; mso-pagination: widow-orphan; mso-char-indent-count: 2.5;" align="left"><span lang="EN-US"><font size="2" face="맑은 고딕" size="2">Open source tools, concepts of alignment of DNA sequences.<br style="mso-special-character:line-break" />
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<td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;" width="547"> <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0;"><span lang="EN-US"><font size="2" face="맑은 고딕" size="2">How molecules and cells propagate in the universe? Evolution.</font></span></p> <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0;"><span lang="EN-US"><font size="2" face="맑은 고딕" size="2">Close species Comparative Genomics (CSCG) for diverse genome evolution.</font></span></p> <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0;"><span lang="EN-US"><font size="2" face="맑은 고딕" size="2">Phylogenetic tree.</font></span></p> <p align="left" style="margin: 0cm 0cm 0pt; text-align: left; word-break: keep-all; mso-pagination: widow-orphan;" align="left"><span lang="EN-US"><font size="2" face="맑은 고딕" size="2">Evolution</font></span></p>
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<td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;" width="547"> <p align="left" style="margin: 0cm 0cm 0pt; text-align: left; word-break: keep-all; mso-pagination: widow-orphan;" align="left"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;바탕&quot;,serif;&#10; mso-bidi-font-family:굴림;color:black;mso-font-kerning:0pt"><font size="2">Human genomes</font></span></p> <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;바탕&quot;,serif;&#10; mso-bidi-font-family:굴림;color:black;mso-font-kerning:0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;&nbsp; </font></span><font size="2">KPGP, KOREF</font></span><span lang="EN-US"><font face="맑은 고딕" size="2"> , [[The first Korean genome]]</font></span></p>
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<td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;" width="547"> <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0;"><span lang="EN-US"><font size="2" face="맑은 고딕" size="2">Genome analyses cases</font></span></p> <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;바탕&quot;,serif;&#10; mso-bidi-font-family:굴림;color:black;mso-font-kerning:0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;</font></span></span><span lang="EN-US"><font size="2" face="맑은 고딕" size="2">Whale genomics</font></span></p>
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<td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;" width="547"> <p style="margin: 0cm 0cm 0pt; text-indent: 5pt; mso-char-indent-count: .5;"><span lang="EN-US"><font size="2" face="맑은 고딕" size="2">Genome analyses cases</font></span></p> <p align="left" style="margin: 0cm 0cm 0pt; text-align: left; text-indent: 5pt; word-break: keep-all; mso-pagination: widow-orphan; mso-char-indent-count: .5;" align="left"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;&#10; font-family:&quot;바탕&quot;,serif;mso-bidi-font-family:굴림;color:black;mso-font-kerning:&#10; 0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp; </font></span><font size="2">Tiger genomes</font></span></p>
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<td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;" width="547"> <p style="margin: 0cm 0cm 0pt; text-indent: 5pt; mso-char-indent-count: .5;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;바탕&quot;,serif;&#10; mso-bidi-font-family:굴림;color:black;mso-font-kerning:0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;</font></span></span><span lang="EN-US"><font size="2" face="맑은 고딕" size="2">Genome analyses cases</font></span></p> <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;바탕&quot;,serif;&#10; mso-bidi-font-family:굴림;color:black;mso-font-kerning:0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;&nbsp; </font></span><font size="2">Vulture genomes</font></span><span lang="EN-US"><font size="2" face="맑은 고딕" size="2"> &amp; Whale genomics</font></span></p> <p align="left" style="margin: 0cm 0cm 0pt; text-align: left; word-break: keep-all; mso-pagination: widow-orphan;" align="left"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;바탕&quot;,serif;&#10; mso-bidi-font-family:굴림;color:black;mso-font-kerning:0pt"><font size="2">&nbsp;</font></span></p>
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<td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;" width="547"> <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;바탕&quot;,serif;&#10; mso-bidi-font-family:굴림;color:black;mso-font-kerning:0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;</font></span></span><span lang="EN-US"><font size="2" face="맑은 고딕" size="2">Genome analyses cases (horse transcriptome)</font></span></p>
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<td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;" width="547"> <p style="margin: 0cm 0cm 0pt;"><span lang="EN-US"><font size="2" face="맑은 고딕" size="2">Curing Cancer using genomics (Oncomics)</font></span></p> <p style="margin: 0cm 0cm 0pt;"><span lang="EN-US"><span style="mso-spacerun:yes"><font size="2" face="맑은 고딕" size="2">&nbsp; </font></span><font size="2" face="맑은 고딕" size="2">Analysing disease genomes</font></span></p>
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<td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;" width="547"> <p style="margin: 0cm 0cm 0pt;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;&#10; font-family:&quot;바탕&quot;,serif;mso-bidi-font-family:굴림;color:black;mso-font-kerning:&#10; 0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;</font></span></span><span lang="EN-US"><font size="2" face="맑은 고딕" size="2">Curing Cancer using genomics (Oncomics)</font></span></p> <p style="margin: 0cm 0cm 0pt;"><span lang="EN-US"><span style="mso-spacerun:yes"><font size="2" face="맑은 고딕" size="2">&nbsp; </font></span><font size="2" face="맑은 고딕" size="2">Diffuse type cancer analyses.</font></span></p>
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<td width="54" style="border-width: 0px 1pt 1pt; border-style: none solid solid; border-color: rgb(0, 0, 0) black black; padding: 1.4pt; border-image: none; width: 40.8pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;" width="54"> <p align="center" style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;" align="center"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10; color:black;mso-font-kerning:0pt"><font size="2">12</font></span></p>
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<td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;" width="547"> <p style="margin: 0cm 0cm 0pt;"><span lang="EN-US"><font size="2" face="맑은 고딕" size="2">Curing Aging using genomics (Geromics)</font></span></p> <p align="left" style="margin: 0cm 0cm 0pt; text-align: left; text-indent: 5pt; word-break: keep-all; mso-pagination: widow-orphan; mso-char-indent-count: .5;" align="left"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;&#10; font-family:&quot;바탕&quot;,serif;mso-bidi-font-family:굴림;color:black;mso-font-kerning:&#10; 0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;</font></span><font size="2">Measuring aging biologically</font></span></p> <p align="left" style="margin: 0cm 0cm 0pt; text-align: left; text-indent: 5pt; word-break: keep-all; mso-pagination: widow-orphan; mso-char-indent-count: .5;" align="left"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;&#10; font-family:&quot;바탕&quot;,serif;mso-bidi-font-family:굴림;color:black;mso-font-kerning:&#10; 0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;</font></span><font size="2">Telomics</font></span></p>
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<td width="54" style="border-width: 0px 1pt 1pt; border-style: none solid solid; border-color: rgb(0, 0, 0) black black; padding: 1.4pt; border-image: none; width: 40.8pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;" width="54"> <p align="center" style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;" align="center"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10; color:black;mso-font-kerning:0pt"><font size="2">13</font></span></p>
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<td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;" width="547"> <p style="margin: 0cm 0cm 0pt;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;&#10; font-family:&quot;바탕&quot;,serif;mso-bidi-font-family:굴림;color:black;mso-font-kerning:&#10; 0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;</font></span></span><span lang="EN-US"><font size="2" face="맑은 고딕" size="2">Curing Aging using genomics (Geromics)</font></span></p> <p align="left" style="margin: 0cm 0cm 0pt; text-align: left; text-indent: 10.2pt; word-break: keep-all; mso-pagination: widow-orphan;" align="left"><span lang="EN-US"><font size="2" face="맑은 고딕" size="2">Aging related keywords and genes</font></span></p>
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<td width="54" style="border-width: 0px 1pt 1pt; border-style: none solid solid; border-color: rgb(0, 0, 0) black black; padding: 1.4pt; border-image: none; width: 40.8pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;" width="54"> <p align="center" style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;" align="center"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10; color:black;mso-font-kerning:0pt"><font size="2">14</font></span></p>
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<td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;" width="547"> <p align="left" style="margin: 0cm 0cm 0pt; text-align: left; word-break: keep-all; mso-pagination: widow-orphan;" align="left"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;바탕&quot;,serif;&#10; mso-bidi-font-family:굴림;color:black;mso-font-kerning:0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;</font></span><font size="2">Research Report presentation (Students presentation)</font></span></p>
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<tr style="mso-yfti-irow:15;mso-yfti-lastrow:yes;height:35.65pt">
<td width="54" style="border-width: 0px 1pt 1pt; border-style: none solid solid; border-color: rgb(0, 0, 0) black black; padding: 1.4pt; border-image: none; width: 40.8pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;" width="54"> <p align="center" style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;" align="center"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10; color:black;mso-font-kerning:0pt"><font size="2">15</font></span></p>
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<td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;" width="547"> <p align="left" style="margin: 0cm 0cm 0pt; text-align: left; word-break: keep-all; mso-pagination: widow-orphan;" align="left"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;바탕&quot;,serif;&#10; mso-bidi-font-family:굴림;color:black;mso-font-kerning:0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;</font></span><font size="2">Research Report presentation</font></span></p>
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<p style="margin: 0cm 0cm 0pt; line-height: 160%; word-break: keep-all; mso-pagination: widow-orphan;"><span lang="EN-US"><font size="2" face="맑은 고딕" size="2">&nbsp;</font></span></p>
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