Difference between revisions of "Jong Bhak's Genomics Syllabus"
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| − | <div style="word-break: keep-all; margin: 0cm 0cm 8pt; line-height: 160%"><strong><span style="color:black | + | <div style="word-break: keep-all; margin: 0cm 0cm 8pt; line-height: 160%"><span style="font-size:24px"><strong><span style="color:black">Jong Bhak's Genomics course syllabus.</span></strong></span></div> |
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| − | <p><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms; font-size:12pt">Weekly Schedule</span></span></p> | + | <p><strong><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms; font-size:12pt">Weekly Schedule</span></span></strong></p> |
<table border="0" cellpadding="0" cellspacing="0" style="border-collapse:collapse; mso-padding-alt:0cm 0cm 0cm 0cm; mso-yfti-tbllook:1184"> | <table border="0" cellpadding="0" cellspacing="0" style="border-collapse:collapse; mso-padding-alt:0cm 0cm 0cm 0cm; mso-yfti-tbllook:1184"> | ||
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| − | <td style="height: 14.7pt; width: 40.8pt"> | + | <td style="height:14.7pt; width:40.8pt"> |
| − | <p style="text-align: center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">Week</span></span></p> | + | <p style="text-align:center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">Week</span></span></p> |
</td> | </td> | ||
| − | <td style="height: 14.7pt; width: 410.2pt"> | + | <td style="height:14.7pt; width:410.2pt"> |
| − | <p style="text-align: center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">Contents</span></span></p> | + | <p style="text-align:center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">Contents</span></span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
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| − | <td style="height: 35.65pt; width: 40.8pt | + | <td style="background-color:transparent; height:35.65pt; width:40.8pt"> |
| − | <p style="text-align: center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">01</span></span></p> | + | <p style="text-align:center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">01</span></span></p> |
</td> | </td> | ||
| − | <td style="height: 35.65pt; width: 410.2pt | + | <td style="background-color:transparent; height:35.65pt; width:410.2pt"> |
<p><span style="color:black; font-size:12pt"><span style="color:black; font-family:바탕,serif"> </span>What is life, information, and the universe? (as information processing objects)</span></p> | <p><span style="color:black; font-size:12pt"><span style="color:black; font-family:바탕,serif"> </span>What is life, information, and the universe? (as information processing objects)</span></p> | ||
| − | <p style="text-align: left"><span style="color:black; font-size:12pt">Introduction to the course.</span></p> | + | <p style="text-align:left"><span style="color:black; font-size:12pt">Introduction to the course.</span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
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| − | <td style="height: 35.65pt; width: 40.8pt | + | <td style="background-color:transparent; height:35.65pt; width:40.8pt"> |
| − | <p style="text-align: center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">02</span></span></p> | + | <p style="text-align:center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">02</span></span></p> |
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| − | <td style="height: 35.65pt; width: 410.2pt | + | <td style="background-color:transparent; height:35.65pt; width:410.2pt"> |
<p><span style="color:black; font-size:12pt">What is Sequencing in Genomics and Omics? (as an approach of understanding life)</span></p> | <p><span style="color:black; font-size:12pt">What is Sequencing in Genomics and Omics? (as an approach of understanding life)</span></p> | ||
| − | <p style="text-align: left"><span style="color:black; font-size:12pt">Sequencing</span><br /> | + | <p style="text-align:left"><span style="color:black; font-size:12pt">Sequencing</span><br /> |
</p> | </p> | ||
</td> | </td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
| − | <td style="height: 35.65pt; width: 40.8pt | + | <td style="background-color:transparent; height:35.65pt; width:40.8pt"> |
| − | <p style="text-align: center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">03</span></span></p> | + | <p style="text-align:center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">03</span></span></p> |
</td> | </td> | ||
| − | <td style="height: 35.65pt; width: 410.2pt | + | <td style="background-color:transparent; height:35.65pt; width:410.2pt"> |
<p><span style="color:black; font-size:12pt">What is alignment, assembly, functional annotation for 'Big data' processing in biology?</span></p> | <p><span style="color:black; font-size:12pt">What is alignment, assembly, functional annotation for 'Big data' processing in biology?</span></p> | ||
| − | <p style="text-align: left"><span style="color:black; font-size:12pt">Open source tools, concepts of alignment of DNA sequences.</span><br /> | + | <p style="text-align:left"><span style="color:black; font-size:12pt">Open source tools, concepts of alignment of DNA sequences.</span><br /> |
</p> | </p> | ||
</td> | </td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
| − | <td style="height: 35.65pt; width: 40.8pt | + | <td style="background-color:transparent; height:35.65pt; width:40.8pt"> |
| − | <p style="text-align: center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">04</span></span></p> | + | <p style="text-align:center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">04</span></span></p> |
</td> | </td> | ||
| − | <td style="height: 35.65pt; width: 410.2pt | + | <td style="background-color:transparent; height:35.65pt; width:410.2pt"> |
<p><span style="color:black; font-size:12pt">How molecules and cells propagate in the universe? Evolution.</span></p> | <p><span style="color:black; font-size:12pt">How molecules and cells propagate in the universe? Evolution.</span></p> | ||
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<p><span style="color:black; font-size:12pt">Phylogenetic tree.</span></p> | <p><span style="color:black; font-size:12pt">Phylogenetic tree.</span></p> | ||
| − | <p style="text-align: left"><span style="color:black; font-size:12pt">Evolution</span></p> | + | <p style="text-align:left"><span style="color:black; font-size:12pt">Evolution</span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
| − | <td style="height: 35.65pt; width: 40.8pt | + | <td style="background-color:transparent; height:35.65pt; width:40.8pt"> |
| − | <p style="text-align: center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">05</span></span></p> | + | <p style="text-align:center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">05</span></span></p> |
</td> | </td> | ||
| − | <td style="height: 35.65pt; width: 410.2pt | + | <td style="background-color:transparent; height:35.65pt; width:410.2pt"> |
| − | <p style="text-align: left"><span style="color:black; font-size:12pt"><span style="color:black; font-family:바탕,serif">Human genomes</span></span></p> | + | <p style="text-align:left"><span style="color:black; font-size:12pt"><span style="color:black; font-family:바탕,serif">Human genomes</span></span></p> |
<p><span style="color:black; font-size:12pt"><span style="color:black; font-family:바탕,serif"> KPGP, KOREF, [[The first Korean genome]]</span></span></p> | <p><span style="color:black; font-size:12pt"><span style="color:black; font-family:바탕,serif"> KPGP, KOREF, [[The first Korean genome]]</span></span></p> | ||
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| − | <td style="height: 35.65pt; width: 40.8pt | + | <td style="background-color:transparent; height:35.65pt; width:40.8pt"> |
| − | <p style="text-align: center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">06</span></span></p> | + | <p style="text-align:center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">06</span></span></p> |
</td> | </td> | ||
| − | <td style="height: 35.65pt; width: 410.2pt | + | <td style="background-color:transparent; height:35.65pt; width:410.2pt"> |
<p><span style="color:black; font-size:12pt">Genome analyses cases</span></p> | <p><span style="color:black; font-size:12pt">Genome analyses cases</span></p> | ||
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| − | <td style="height: 35.65pt; width: 40.8pt | + | <td style="background-color:transparent; height:35.65pt; width:40.8pt"> |
| − | <p style="text-align: center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">07</span></span></p> | + | <p style="text-align:center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">07</span></span></p> |
</td> | </td> | ||
| − | <td style="height: 35.65pt; width: 410.2pt | + | <td style="background-color:transparent; height:35.65pt; width:410.2pt"> |
<p><span style="color:black; font-size:12pt">Genome analyses cases</span></p> | <p><span style="color:black; font-size:12pt">Genome analyses cases</span></p> | ||
| − | <p style="text-align: left"><span style="color:black; font-size:12pt"><span style="color:black; font-family:바탕,serif"> Tiger genomes</span></span></p> | + | <p style="text-align:left"><span style="color:black; font-size:12pt"><span style="color:black; font-family:바탕,serif"> Tiger genomes</span></span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
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| − | <td style="height: 35.65pt; width: 40.8pt | + | <td style="background-color:transparent; height:35.65pt; width:40.8pt"> |
| − | <p style="text-align: center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">08</span></span></p> | + | <p style="text-align:center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">08</span></span></p> |
</td> | </td> | ||
| − | <td style="height: 35.65pt; width: 410.2pt | + | <td style="background-color:transparent; height:35.65pt; width:410.2pt"> |
<p><span style="color:black; font-size:12pt"><span style="color:black; font-family:바탕,serif"> </span>Genome analyses cases</span></p> | <p><span style="color:black; font-size:12pt"><span style="color:black; font-family:바탕,serif"> </span>Genome analyses cases</span></p> | ||
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</tr> | </tr> | ||
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| − | <td style="height: 35.65pt; width: 40.8pt | + | <td style="background-color:transparent; height:35.65pt; width:40.8pt"> |
| − | <p style="text-align: center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">09</span></span></p> | + | <p style="text-align:center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">09</span></span></p> |
</td> | </td> | ||
| − | <td style="height: 35.65pt; width: 410.2pt | + | <td style="background-color:transparent; height:35.65pt; width:410.2pt"> |
<p><span style="color:black; font-size:12pt"><span style="color:black; font-family:바탕,serif"> </span>Genome analyses cases (horse transcriptome)</span></p> | <p><span style="color:black; font-size:12pt"><span style="color:black; font-family:바탕,serif"> </span>Genome analyses cases (horse transcriptome)</span></p> | ||
</td> | </td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
| − | <td style="height: 35.65pt; width: 40.8pt | + | <td style="background-color:transparent; height:35.65pt; width:40.8pt"> |
| − | <p style="text-align: center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">10</span></span></p> | + | <p style="text-align:center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">10</span></span></p> |
</td> | </td> | ||
| − | <td style="height: 35.65pt; width: 410.2pt | + | <td style="background-color:transparent; height:35.65pt; width:410.2pt"> |
<p><span style="color:black; font-size:12pt">Curing Cancer using genomics (Oncomics)</span></p> | <p><span style="color:black; font-size:12pt">Curing Cancer using genomics (Oncomics)</span></p> | ||
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</tr> | </tr> | ||
<tr> | <tr> | ||
| − | <td style="height: 35.65pt; width: 40.8pt | + | <td style="background-color:transparent; height:35.65pt; width:40.8pt"> |
| − | <p style="text-align: center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">11</span></span></p> | + | <p style="text-align:center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">11</span></span></p> |
</td> | </td> | ||
| − | <td style="height: 35.65pt; width: 410.2pt | + | <td style="background-color:transparent; height:35.65pt; width:410.2pt"> |
<p><span style="color:black; font-size:12pt"><span style="color:black; font-family:바탕,serif"> </span>Curing Cancer using genomics (Oncomics)</span></p> | <p><span style="color:black; font-size:12pt"><span style="color:black; font-family:바탕,serif"> </span>Curing Cancer using genomics (Oncomics)</span></p> | ||
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</tr> | </tr> | ||
<tr> | <tr> | ||
| − | <td style="height: 35.65pt; width: 40.8pt | + | <td style="background-color:transparent; height:35.65pt; width:40.8pt"> |
| − | <p style="text-align: center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">12</span></span></p> | + | <p style="text-align:center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">12</span></span></p> |
</td> | </td> | ||
| − | <td style="height: 35.65pt; width: 410.2pt | + | <td style="background-color:transparent; height:35.65pt; width:410.2pt"> |
<p><span style="color:black; font-size:12pt">Curing Aging using genomics (Geromics)</span></p> | <p><span style="color:black; font-size:12pt">Curing Aging using genomics (Geromics)</span></p> | ||
| − | <p style="text-align: left"><span style="color:black; font-size:12pt"><span style="color:black; font-family:바탕,serif"> [[Measuring aging biologically]]</span></span></p> | + | <p style="text-align:left"><span style="color:black; font-size:12pt"><span style="color:black; font-family:바탕,serif"> [[Measuring aging biologically]]</span></span></p> |
| − | <p style="text-align: left"><span style="color:black; font-size:12pt"><span style="color:black; font-family:바탕,serif"> [[Telomics]]</span></span></p> | + | <p style="text-align:left"><span style="color:black; font-size:12pt"><span style="color:black; font-family:바탕,serif"> [[Telomics]]</span></span></p> |
| − | <p style="text-align: left"><span style="color:black; font-size:12pt"><span style="color:black; font-family:바탕,serif"> [[Geromics Lecture related links: telomeres]]</span></span></p> | + | <p style="text-align:left"><span style="color:black; font-size:12pt"><span style="color:black; font-family:바탕,serif"> [[Geromics Lecture related links: telomeres]]</span></span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
| − | <td style="height: 35.65pt; width: 40.8pt | + | <td style="background-color:transparent; height:35.65pt; width:40.8pt"> |
| − | <p style="text-align: center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">13</span></span></p> | + | <p style="text-align:center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">13</span></span></p> |
</td> | </td> | ||
| − | <td style="height: 35.65pt; width: 410.2pt | + | <td style="background-color:transparent; height:35.65pt; width:410.2pt"> |
<p><span style="color:black; font-size:12pt"><span style="color:black; font-family:바탕,serif"> </span>Curing Aging using genomics (Geromics)</span></p> | <p><span style="color:black; font-size:12pt"><span style="color:black; font-family:바탕,serif"> </span>Curing Aging using genomics (Geromics)</span></p> | ||
| − | <p style="text-align: left"><span style="color:black; font-size:12pt"> Aging related keywords and genes</span></p> | + | <p style="text-align:left"><span style="color:black; font-size:12pt"> Aging related keywords and genes</span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
| − | <td style="height: 35.65pt; width: 40.8pt | + | <td style="background-color:transparent; height:35.65pt; width:40.8pt"> |
| − | <p style="text-align: center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">14</span></span></p> | + | <p style="text-align:center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">14</span></span></p> |
</td> | </td> | ||
| − | <td style="height: 35.65pt; width: 410.2pt | + | <td style="background-color:transparent; height:35.65pt; width:410.2pt"> |
| − | <p style="text-align: left"><span style="color:black; font-size:12pt"><span style="color:black; font-family:바탕,serif"> Research Report presentation (Students presentation)</span></span></p> | + | <p style="text-align:left"><span style="color:black; font-size:12pt"><span style="color:black; font-family:바탕,serif"> Research Report presentation (Students presentation)</span></span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
<tr> | <tr> | ||
| − | <td style="height: 35.65pt; width: 40.8pt | + | <td style="background-color:transparent; height:35.65pt; width:40.8pt"> |
| − | <p style="text-align: center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">15</span></span></p> | + | <p style="text-align:center"><span style="color:black; font-size:12pt"><span style="color:black; font-family:arial unicode ms">15</span></span></p> |
</td> | </td> | ||
| − | <td style="height: 35.65pt; width: 410.2pt | + | <td style="background-color:transparent; height:35.65pt; width:410.2pt"> |
| − | <p style="text-align: left"><span style="color:black; font-size:12pt"><span style="color:black; font-family:바탕,serif"> Research Report presentation</span></span></p> | + | <p style="text-align:left"><span style="color:black; font-size:12pt"><span style="color:black; font-family:바탕,serif"> Research Report presentation</span></span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
Revision as of 07:54, 25 January 2016
Jong Bhak's Genomics course syllabus.
Weekly Schedule
|
Week |
Contents |
|
01 |
What is life, information, and the universe? (as information processing objects) Introduction to the course. |
|
02 |
What is Sequencing in Genomics and Omics? (as an approach of understanding life) Sequencing |
|
03 |
What is alignment, assembly, functional annotation for 'Big data' processing in biology? Open source tools, concepts of alignment of DNA sequences. |
|
04 |
How molecules and cells propagate in the universe? Evolution. Close species Comparative Genomics (CSCG) for diverse genome evolution. Phylogenetic tree. Evolution |
|
05 |
Human genomes KPGP, KOREF, The first Korean genome
|
|
06 |
Genome analyses cases Whale genomics |
|
07 |
Genome analyses cases Tiger genomes |
|
08 |
Genome analyses cases Vulture genomes |
|
09 |
Genome analyses cases (horse transcriptome) |
|
10 |
Curing Cancer using genomics (Oncomics) Analysing disease genomes |
|
11 |
Curing Cancer using genomics (Oncomics) Diffuse type cancer analyses. |
|
12 |
Curing Aging using genomics (Geromics) |
|
13 |
Curing Aging using genomics (Geromics) Aging related keywords and genes |
|
14 |
Research Report presentation (Students presentation) |
|
15 |
Research Report presentation |
