Difference between revisions of "Jong Bhak's Genomics Syllabus"

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             <td width="547" style="background: rgb(214, 214, 214); border-width: 1pt 1pt 1pt 0px; border-style: solid solid solid none; border-color: black black black rgb(0, 0, 0); padding: 1.4pt; border-image: none; width: 410.2pt; height: 14.7pt; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt;">
             <p align="center" style="margin: 0cm 0cm 0pt; text-align: center; line-height: 160%; word-break: keep-all; mso-pagination: widow-orphan;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;&#10;  line-height:160%;font-family:&quot;Arial Unicode MS&quot;;color:black;mso-font-kerning:&#10;  0pt"><font size="2">Contents</font></span></p>
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             <p style="margin: 0cm 0cm 0pt; text-align: center; line-height: 160%; word-break: keep-all; mso-pagination: widow-orphan;" align="center"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;&#10;  line-height:160%;font-family:&quot;Arial Unicode MS&quot;;color:black;mso-font-kerning:&#10;  0pt"><font size="2">Contents</font></span></p>
 
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             <td width="54" style="border-width: 0px 1pt 1pt; border-style: none solid solid; border-color: rgb(0, 0, 0) black black; padding: 1.4pt; border-image: none; width: 40.8pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
             <p align="center" style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">01</font></span></p>
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             <p style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;" align="center"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">01</font></span></p>
 
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             <td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
 
             <p style="margin: 0cm 0cm 0pt;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;&#10;  font-family:&quot;바탕&quot;,serif;mso-bidi-font-family:굴림;color:black;mso-font-kerning:&#10;  0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;</font></span></span><span lang="EN-US"><font size="2" face="맑은 고딕">What is  life, information, and the universe?&nbsp; (as information processing  objects)</font></span></p>
 
             <p style="margin: 0cm 0cm 0pt;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;&#10;  font-family:&quot;바탕&quot;,serif;mso-bidi-font-family:굴림;color:black;mso-font-kerning:&#10;  0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;</font></span></span><span lang="EN-US"><font size="2" face="맑은 고딕">What is  life, information, and the universe?&nbsp; (as information processing  objects)</font></span></p>
             <p align="left" style="margin: 0cm 0cm 0pt; text-align: left; text-indent: 5pt; word-break: keep-all; mso-pagination: widow-orphan; mso-char-indent-count: .5;"><span lang="EN-US"><font size="2" face="맑은 고딕">Introduction to the course.</font></span></p>
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             <p style="margin: 0cm 0cm 0pt; text-align: left; text-indent: 5pt; word-break: keep-all; mso-pagination: widow-orphan; mso-char-indent-count: .5;" align="left"><span lang="EN-US"><font size="2" face="맑은 고딕">Introduction to the course.</font></span></p>
 
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             <p align="center" style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">02</font></span></p>
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             <p style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;" align="center"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">02</font></span></p>
 
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             <td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
 
             <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0;"><span lang="EN-US"><font size="2" face="맑은 고딕">What is Sequencing in Genomics and Omics? (as an approach of  understanding life)</font></span></p>
 
             <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0;"><span lang="EN-US"><font size="2" face="맑은 고딕">What is Sequencing in Genomics and Omics? (as an approach of  understanding life)</font></span></p>
             <p align="left" style="margin: 0cm 0cm 0pt; text-align: left; text-indent: 5pt; word-break: keep-all; mso-pagination: widow-orphan; mso-char-indent-count: .5;"><span lang="EN-US"><font size="2" face="맑은 고딕">Sequencing<br style="mso-special-character:&#10;  line-break"  />
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             <p style="margin: 0cm 0cm 0pt; text-align: left; text-indent: 5pt; word-break: keep-all; mso-pagination: widow-orphan; mso-char-indent-count: .5;" align="left"><span lang="EN-US"><font size="2" face="맑은 고딕">Sequencing<br style="mso-special-character:&#10;  line-break"  />
 
             </font>  <br style="mso-special-character:line-break"  />
 
             </font>  <br style="mso-special-character:line-break"  />
 
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             <td width="54" style="border-width: 0px 1pt 1pt; border-style: none solid solid; border-color: rgb(0, 0, 0) black black; padding: 1.4pt; border-image: none; width: 40.8pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
             <p align="center" style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">03</font></span></p>
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             <p style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;" align="center"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">03</font></span></p>
 
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             <td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
 
             <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0;"><span lang="EN-US"><font size="2" face="맑은 고딕">What is alignment, assembly, functional annotation for 'Big data' processing  in biology?</font></span></p>
 
             <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0;"><span lang="EN-US"><font size="2" face="맑은 고딕">What is alignment, assembly, functional annotation for 'Big data' processing  in biology?</font></span></p>
             <p align="left" style="margin: 0cm 0cm 0pt; text-align: left; text-indent: 25pt; word-break: keep-all; mso-pagination: widow-orphan; mso-char-indent-count: 2.5;"><span lang="EN-US"><font size="2" face="맑은 고딕">Open source tools, concepts of  alignment of DNA sequences.<br style="mso-special-character:line-break"  />
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             <p style="margin: 0cm 0cm 0pt; text-align: left; text-indent: 25pt; word-break: keep-all; mso-pagination: widow-orphan; mso-char-indent-count: 2.5;" align="left"><span lang="EN-US"><font size="2" face="맑은 고딕">Open source tools, concepts of  alignment of DNA sequences.<br style="mso-special-character:line-break"  />
 
             </font>  <br style="mso-special-character:line-break"  />
 
             </font>  <br style="mso-special-character:line-break"  />
 
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             <p align="center" style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">04</font></span></p>
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             <p style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;" align="center"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">04</font></span></p>
 
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             <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0;"><span lang="EN-US"><font size="2" face="맑은 고딕">Close species Comparative Genomics (CSCG) for diverse genome  evolution.</font></span></p>
 
             <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0;"><span lang="EN-US"><font size="2" face="맑은 고딕">Close species Comparative Genomics (CSCG) for diverse genome  evolution.</font></span></p>
 
             <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0;"><span lang="EN-US"><font size="2" face="맑은 고딕">Phylogenetic tree.</font></span></p>
 
             <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0;"><span lang="EN-US"><font size="2" face="맑은 고딕">Phylogenetic tree.</font></span></p>
             <p align="left" style="margin: 0cm 0cm 0pt; text-align: left; word-break: keep-all; mso-pagination: widow-orphan;"><span lang="EN-US"><font size="2" face="맑은 고딕">Evolution</font></span></p>
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             <p style="margin: 0cm 0cm 0pt; text-align: left; word-break: keep-all; mso-pagination: widow-orphan;" align="left"><span lang="EN-US"><font size="2" face="맑은 고딕">Evolution</font></span></p>
 
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             <p align="center" style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">05</font></span></p>
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             <p style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;" align="center"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">05</font></span></p>
 
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             <p align="left" style="margin: 0cm 0cm 0pt; text-align: left; word-break: keep-all; mso-pagination: widow-orphan;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;바탕&quot;,serif;&#10;  mso-bidi-font-family:굴림;color:black;mso-font-kerning:0pt"><font size="2">Human genomes</font></span></p>
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             <p style="margin: 0cm 0cm 0pt; text-align: left; word-break: keep-all; mso-pagination: widow-orphan;" align="left"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;바탕&quot;,serif;&#10;  mso-bidi-font-family:굴림;color:black;mso-font-kerning:0pt"><font size="2">Human genomes</font></span></p>
 
             <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;바탕&quot;,serif;&#10;  mso-bidi-font-family:굴림;color:black;mso-font-kerning:0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;&nbsp; </font></span><font size="2">KPGP, KOREF, [[The first Korean genome]]</font></span></p>
 
             <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;바탕&quot;,serif;&#10;  mso-bidi-font-family:굴림;color:black;mso-font-kerning:0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;&nbsp; </font></span><font size="2">KPGP, KOREF, [[The first Korean genome]]</font></span></p>
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            <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0;">&nbsp;</p>
 
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             <td width="54" style="border-width: 0px 1pt 1pt; border-style: none solid solid; border-color: rgb(0, 0, 0) black black; padding: 1.4pt; border-image: none; width: 40.8pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
 
             <td width="54" style="border-width: 0px 1pt 1pt; border-style: none solid solid; border-color: rgb(0, 0, 0) black black; padding: 1.4pt; border-image: none; width: 40.8pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
             <p align="center" style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">06</font></span></p>
+
             <p style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;" align="center"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">06</font></span></p>
 
             </td>
 
             </td>
 
             <td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
 
             <td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
Line 75: Line 76:
 
         <tr style="mso-yfti-irow:7;height:35.65pt">
 
         <tr style="mso-yfti-irow:7;height:35.65pt">
 
             <td width="54" style="border-width: 0px 1pt 1pt; border-style: none solid solid; border-color: rgb(0, 0, 0) black black; padding: 1.4pt; border-image: none; width: 40.8pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
 
             <td width="54" style="border-width: 0px 1pt 1pt; border-style: none solid solid; border-color: rgb(0, 0, 0) black black; padding: 1.4pt; border-image: none; width: 40.8pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
             <p align="center" style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">07</font></span></p>
+
             <p style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;" align="center"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">07</font></span></p>
 
             </td>
 
             </td>
 
             <td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
 
             <td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
 
             <p style="margin: 0cm 0cm 0pt; text-indent: 5pt; mso-char-indent-count: .5;"><span lang="EN-US"><font size="2" face="맑은 고딕">Genome analyses cases</font></span></p>
 
             <p style="margin: 0cm 0cm 0pt; text-indent: 5pt; mso-char-indent-count: .5;"><span lang="EN-US"><font size="2" face="맑은 고딕">Genome analyses cases</font></span></p>
             <p align="left" style="margin: 0cm 0cm 0pt; text-align: left; text-indent: 5pt; word-break: keep-all; mso-pagination: widow-orphan; mso-char-indent-count: .5;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;&#10;  font-family:&quot;바탕&quot;,serif;mso-bidi-font-family:굴림;color:black;mso-font-kerning:&#10;  0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp; </font></span><font size="2">Tiger genomes</font></span></p>
+
             <p style="margin: 0cm 0cm 0pt; text-align: left; text-indent: 5pt; word-break: keep-all; mso-pagination: widow-orphan; mso-char-indent-count: .5;" align="left"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;&#10;  font-family:&quot;바탕&quot;,serif;mso-bidi-font-family:굴림;color:black;mso-font-kerning:&#10;  0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp; </font></span><font size="2">Tiger genomes</font></span></p>
 
             </td>
 
             </td>
 
         </tr>
 
         </tr>
 
         <tr style="mso-yfti-irow:8;height:35.65pt">
 
         <tr style="mso-yfti-irow:8;height:35.65pt">
 
             <td width="54" style="border-width: 0px 1pt 1pt; border-style: none solid solid; border-color: rgb(0, 0, 0) black black; padding: 1.4pt; border-image: none; width: 40.8pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
 
             <td width="54" style="border-width: 0px 1pt 1pt; border-style: none solid solid; border-color: rgb(0, 0, 0) black black; padding: 1.4pt; border-image: none; width: 40.8pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
             <p align="center" style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">08</font></span></p>
+
             <p style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;" align="center"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">08</font></span></p>
 
             </td>
 
             </td>
 
             <td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
 
             <td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
 
             <p style="margin: 0cm 0cm 0pt; text-indent: 5pt; mso-char-indent-count: .5;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;바탕&quot;,serif;&#10;  mso-bidi-font-family:굴림;color:black;mso-font-kerning:0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;</font></span></span><span lang="EN-US"><font size="2" face="맑은 고딕">Genome analyses  cases</font></span></p>
 
             <p style="margin: 0cm 0cm 0pt; text-indent: 5pt; mso-char-indent-count: .5;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;바탕&quot;,serif;&#10;  mso-bidi-font-family:굴림;color:black;mso-font-kerning:0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;</font></span></span><span lang="EN-US"><font size="2" face="맑은 고딕">Genome analyses  cases</font></span></p>
 
             <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;바탕&quot;,serif;&#10;  mso-bidi-font-family:굴림;color:black;mso-font-kerning:0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;&nbsp; </font></span><font size="2">Vulture genomes</font></span><span lang="EN-US"><font size="2" face="맑은 고딕"> &amp;  Whale genomics</font></span></p>
 
             <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;바탕&quot;,serif;&#10;  mso-bidi-font-family:굴림;color:black;mso-font-kerning:0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;&nbsp; </font></span><font size="2">Vulture genomes</font></span><span lang="EN-US"><font size="2" face="맑은 고딕"> &amp;  Whale genomics</font></span></p>
             <p align="left" style="margin: 0cm 0cm 0pt; text-align: left; word-break: keep-all; mso-pagination: widow-orphan;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;바탕&quot;,serif;&#10;  mso-bidi-font-family:굴림;color:black;mso-font-kerning:0pt"><font size="2">&nbsp;</font></span></p>
+
             <p style="margin: 0cm 0cm 0pt; text-align: left; word-break: keep-all; mso-pagination: widow-orphan;" align="left"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;바탕&quot;,serif;&#10;  mso-bidi-font-family:굴림;color:black;mso-font-kerning:0pt"><font size="2">&nbsp;</font></span></p>
 
             </td>
 
             </td>
 
         </tr>
 
         </tr>
 
         <tr style="mso-yfti-irow:9;height:35.65pt">
 
         <tr style="mso-yfti-irow:9;height:35.65pt">
 
             <td width="54" style="border-width: 0px 1pt 1pt; border-style: none solid solid; border-color: rgb(0, 0, 0) black black; padding: 1.4pt; border-image: none; width: 40.8pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
 
             <td width="54" style="border-width: 0px 1pt 1pt; border-style: none solid solid; border-color: rgb(0, 0, 0) black black; padding: 1.4pt; border-image: none; width: 40.8pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
             <p align="center" style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">09</font></span></p>
+
             <p style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;" align="center"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">09</font></span></p>
 
             </td>
 
             </td>
 
             <td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
 
             <td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
Line 102: Line 103:
 
         <tr style="mso-yfti-irow:10;height:35.65pt">
 
         <tr style="mso-yfti-irow:10;height:35.65pt">
 
             <td width="54" style="border-width: 0px 1pt 1pt; border-style: none solid solid; border-color: rgb(0, 0, 0) black black; padding: 1.4pt; border-image: none; width: 40.8pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
 
             <td width="54" style="border-width: 0px 1pt 1pt; border-style: none solid solid; border-color: rgb(0, 0, 0) black black; padding: 1.4pt; border-image: none; width: 40.8pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
             <p align="center" style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">10</font></span></p>
+
             <p style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;" align="center"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">10</font></span></p>
 
             </td>
 
             </td>
 
             <td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
 
             <td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
Line 111: Line 112:
 
         <tr style="mso-yfti-irow:11;height:35.65pt">
 
         <tr style="mso-yfti-irow:11;height:35.65pt">
 
             <td width="54" style="border-width: 0px 1pt 1pt; border-style: none solid solid; border-color: rgb(0, 0, 0) black black; padding: 1.4pt; border-image: none; width: 40.8pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
 
             <td width="54" style="border-width: 0px 1pt 1pt; border-style: none solid solid; border-color: rgb(0, 0, 0) black black; padding: 1.4pt; border-image: none; width: 40.8pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
             <p align="center" style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">11</font></span></p>
+
             <p style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;" align="center"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">11</font></span></p>
 
             </td>
 
             </td>
 
             <td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
 
             <td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
Line 120: Line 121:
 
         <tr style="mso-yfti-irow:12;height:35.65pt">
 
         <tr style="mso-yfti-irow:12;height:35.65pt">
 
             <td width="54" style="border-width: 0px 1pt 1pt; border-style: none solid solid; border-color: rgb(0, 0, 0) black black; padding: 1.4pt; border-image: none; width: 40.8pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
 
             <td width="54" style="border-width: 0px 1pt 1pt; border-style: none solid solid; border-color: rgb(0, 0, 0) black black; padding: 1.4pt; border-image: none; width: 40.8pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
             <p align="center" style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">12</font></span></p>
+
             <p style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;" align="center"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">12</font></span></p>
 
             </td>
 
             </td>
 
             <td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
 
             <td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
 
             <p style="margin: 0cm 0cm 0pt;"><span lang="EN-US"><font size="2" face="맑은 고딕">Curing Aging using genomics (Geromics)</font></span></p>
 
             <p style="margin: 0cm 0cm 0pt;"><span lang="EN-US"><font size="2" face="맑은 고딕">Curing Aging using genomics (Geromics)</font></span></p>
             <p align="left" style="margin: 0cm 0cm 0pt; text-align: left; text-indent: 5pt; word-break: keep-all; mso-pagination: widow-orphan; mso-char-indent-count: .5;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;&#10;  font-family:&quot;바탕&quot;,serif;mso-bidi-font-family:굴림;color:black;mso-font-kerning:&#10;  0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;</font></span><font size="2">Measuring aging biologically</font></span></p>
+
             <p style="margin: 0cm 0cm 0pt; text-align: left; text-indent: 5pt; word-break: keep-all; mso-pagination: widow-orphan; mso-char-indent-count: .5;" align="left"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;&#10;  font-family:&quot;바탕&quot;,serif;mso-bidi-font-family:굴림;color:black;mso-font-kerning:&#10;  0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;</font></span><font size="2">Measuring aging biologically</font></span></p>
             <p align="left" style="margin: 0cm 0cm 0pt; text-align: left; text-indent: 5pt; word-break: keep-all; mso-pagination: widow-orphan; mso-char-indent-count: .5;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;&#10;  font-family:&quot;바탕&quot;,serif;mso-bidi-font-family:굴림;color:black;mso-font-kerning:&#10;  0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;</font></span><font size="2">Telomics</font></span></p>
+
             <p style="margin: 0cm 0cm 0pt; text-align: left; text-indent: 5pt; word-break: keep-all; mso-pagination: widow-orphan; mso-char-indent-count: .5;" align="left"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;&#10;  font-family:&quot;바탕&quot;,serif;mso-bidi-font-family:굴림;color:black;mso-font-kerning:&#10;  0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;</font></span><font size="2">Telomics</font></span></p>
 
             </td>
 
             </td>
 
         </tr>
 
         </tr>
 
         <tr style="mso-yfti-irow:13;height:35.65pt">
 
         <tr style="mso-yfti-irow:13;height:35.65pt">
 
             <td width="54" style="border-width: 0px 1pt 1pt; border-style: none solid solid; border-color: rgb(0, 0, 0) black black; padding: 1.4pt; border-image: none; width: 40.8pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
 
             <td width="54" style="border-width: 0px 1pt 1pt; border-style: none solid solid; border-color: rgb(0, 0, 0) black black; padding: 1.4pt; border-image: none; width: 40.8pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
             <p align="center" style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">13</font></span></p>
+
             <p style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;" align="center"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">13</font></span></p>
 
             </td>
 
             </td>
 
             <td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
 
             <td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
 
             <p style="margin: 0cm 0cm 0pt;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;&#10;  font-family:&quot;바탕&quot;,serif;mso-bidi-font-family:굴림;color:black;mso-font-kerning:&#10;  0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;</font></span></span><span lang="EN-US"><font size="2" face="맑은 고딕">Curing  Aging using genomics (Geromics)</font></span></p>
 
             <p style="margin: 0cm 0cm 0pt;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;&#10;  font-family:&quot;바탕&quot;,serif;mso-bidi-font-family:굴림;color:black;mso-font-kerning:&#10;  0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;</font></span></span><span lang="EN-US"><font size="2" face="맑은 고딕">Curing  Aging using genomics (Geromics)</font></span></p>
             <p align="left" style="margin: 0cm 0cm 0pt; text-align: left; text-indent: 10.2pt; word-break: keep-all; mso-pagination: widow-orphan;"><span lang="EN-US"><font size="2" face="맑은 고딕">Aging related keywords and genes</font></span></p>
+
             <p style="margin: 0cm 0cm 0pt; text-align: left; text-indent: 10.2pt; word-break: keep-all; mso-pagination: widow-orphan;" align="left"><span lang="EN-US"><font size="2" face="맑은 고딕">Aging related keywords and genes</font></span></p>
 
             </td>
 
             </td>
 
         </tr>
 
         </tr>
 
         <tr style="mso-yfti-irow:14;height:35.65pt">
 
         <tr style="mso-yfti-irow:14;height:35.65pt">
 
             <td width="54" style="border-width: 0px 1pt 1pt; border-style: none solid solid; border-color: rgb(0, 0, 0) black black; padding: 1.4pt; border-image: none; width: 40.8pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
 
             <td width="54" style="border-width: 0px 1pt 1pt; border-style: none solid solid; border-color: rgb(0, 0, 0) black black; padding: 1.4pt; border-image: none; width: 40.8pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
             <p align="center" style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">14</font></span></p>
+
             <p style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;" align="center"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">14</font></span></p>
 
             </td>
 
             </td>
 
             <td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
 
             <td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
             <p align="left" style="margin: 0cm 0cm 0pt; text-align: left; word-break: keep-all; mso-pagination: widow-orphan;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;바탕&quot;,serif;&#10;  mso-bidi-font-family:굴림;color:black;mso-font-kerning:0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;</font></span><font size="2">Research Report presentation (Students  presentation)</font></span></p>
+
             <p style="margin: 0cm 0cm 0pt; text-align: left; word-break: keep-all; mso-pagination: widow-orphan;" align="left"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;바탕&quot;,serif;&#10;  mso-bidi-font-family:굴림;color:black;mso-font-kerning:0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;</font></span><font size="2">Research Report presentation (Students  presentation)</font></span></p>
 
             </td>
 
             </td>
 
         </tr>
 
         </tr>
 
         <tr style="mso-yfti-irow:15;mso-yfti-lastrow:yes;height:35.65pt">
 
         <tr style="mso-yfti-irow:15;mso-yfti-lastrow:yes;height:35.65pt">
 
             <td width="54" style="border-width: 0px 1pt 1pt; border-style: none solid solid; border-color: rgb(0, 0, 0) black black; padding: 1.4pt; border-image: none; width: 40.8pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
 
             <td width="54" style="border-width: 0px 1pt 1pt; border-style: none solid solid; border-color: rgb(0, 0, 0) black black; padding: 1.4pt; border-image: none; width: 40.8pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
             <p align="center" style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">15</font></span></p>
+
             <p style="margin: 0cm 0cm 0pt; text-align: center; word-break: keep-all; mso-pagination: widow-orphan;" align="center"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;Arial Unicode MS&quot;;&#10;  color:black;mso-font-kerning:0pt"><font size="2">15</font></span></p>
 
             </td>
 
             </td>
 
             <td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
 
             <td width="547" style="border-width: 0px 1pt 1pt 0px; border-style: none solid solid none; border-color: rgb(0, 0, 0) black black rgb(0, 0, 0); padding: 1.4pt; width: 410.2pt; height: 35.65pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt;">
             <p align="left" style="margin: 0cm 0cm 0pt; text-align: left; word-break: keep-all; mso-pagination: widow-orphan;"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;바탕&quot;,serif;&#10;  mso-bidi-font-family:굴림;color:black;mso-font-kerning:0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;</font></span><font size="2">Research Report presentation</font></span></p>
+
             <p style="margin: 0cm 0cm 0pt; text-align: left; word-break: keep-all; mso-pagination: widow-orphan;" align="left"><span lang="EN-US" style="mso-bidi-font-size:10.0pt;font-family:&quot;바탕&quot;,serif;&#10;  mso-bidi-font-family:굴림;color:black;mso-font-kerning:0pt"><span style="mso-spacerun:yes"><font size="2">&nbsp;</font></span><font size="2">Research Report presentation</font></span></p>
 
             </td>
 
             </td>
 
         </tr>
 
         </tr>

Revision as of 02:59, 29 September 2015

Jong Bhak's Genomics course syllabus.

Weekly Schedule

Week

Contents

01

 What is life, information, and the universe?  (as information processing objects)

Introduction to the course.

02

What is Sequencing in Genomics and Omics? (as an approach of understanding life)

Sequencing

03

What is alignment, assembly, functional annotation for 'Big data' processing in biology?

Open source tools, concepts of alignment of DNA sequences.

04

How molecules and cells propagate in the universe? Evolution.

Close species Comparative Genomics (CSCG) for diverse genome evolution.

Phylogenetic tree.

Evolution

05

Human genomes

   KPGP, KOREF, The first Korean genome

 

06

Genome analyses cases

 Whale genomics

07

Genome analyses cases

  Tiger genomes

08

 Genome analyses cases

   Vulture genomes & Whale genomics

 

09

 Genome analyses cases (horse transcriptome)

10

Curing Cancer using genomics (Oncomics)

  Analysing disease genomes

11

 Curing Cancer using genomics (Oncomics)

  Diffuse type cancer analyses.

12

Curing Aging using genomics (Geromics)

 Measuring aging biologically

 Telomics

13

 Curing Aging using genomics (Geromics)

Aging related keywords and genes

14

 Research Report presentation (Students presentation)

15

 Research Report presentation