imported>Yeong Jae Kim |
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| − | <p><strong>1. Learn <a href="http://biolecture.org/index.php/Perl" title="Perl">Perl</a> programming language and learn bioinformatics using it.</strong></p>
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| − | <p> [[1) Install and Learn Bioperl]] </p> | + | <span style="font-size:20px">Jong Bhak lecture Homework page</span> |
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| − | <p> [[2) Make a perl program translating 'all' combinations of triple bases into amino acids]]</p>
| + | [[Genomics_Homework|Genomics course homework guide]] |
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| − | <p> [[3) Pick 5 protein sequences and predict their secondary structures using available prediction programs]]</p>
| + | [[Bioinformatics_Homework|Bioinformatics Homework]] |
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| − | <p> [[4) Open and re-write one FASTA file containing one protein sequence of TERT]]</p>
| + | [[Omics_Homework|Omics Homework]] |
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| − | <p> [[5) Create a FASTA file with a sequence. Open it and reverse the sequence of it and print it out in another FASTA file]]</p>
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| − | <p> [[6) Extract a sequence MKKTGIKG from ASMKATAHQMKKTGIKGMSTYALLRL and print it out in a file]]</p>
| + | [[Genomics_2021_Homework|Genomics 2021 Homework]] |
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| − | <p> [[7) In a multi-sequence FASTA file, produce statistics such as sequence number, average seq length, GC content, AT content, etc]]</p>
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| − | <p> [[8) Align two protein sequences using a dynamic programming method in perl]]</p>
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| − | <p> [[9) Randomly generate five 100 AA long protein sequences and store them in a FASTA file]]</p>
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| − | <p> [[10) Create a flat text file database of protein sequences with has functino in Perl]]</p>
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| − | <p> </p>
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