Difference between revisions of "Jong Bhak's Genomics Syllabus"
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<div style="margin: 0cm 0cm 8pt; line-height: 160%; -ms-word-break: keep-all"><b><span style="font-size: 12pt; color: black; line-height: 160%">Jong Bhak's Genomics course syllabus.</span></b></div> | <div style="margin: 0cm 0cm 8pt; line-height: 160%; -ms-word-break: keep-all"><b><span style="font-size: 12pt; color: black; line-height: 160%">Jong Bhak's Genomics course syllabus.</span></b></div> | ||
<div style="margin: 0cm 0cm 8pt; line-height: 160%; -ms-word-break: keep-all"><span style="font-size: 12pt; color: black; line-height: 160%"> | <div style="margin: 0cm 0cm 8pt; line-height: 160%; -ms-word-break: keep-all"><span style="font-size: 12pt; color: black; line-height: 160%"> | ||
| − | <p style="margin: 0cm 0cm 0pt; line-height: 160% | + | <p style="word-break: keep-all; margin: 0cm 0cm 0pt; line-height: 160%; mso-pagination: widow-orphan"><span lang="EN-US" style="font-size: 12pt; font-family: "Arial Unicode MS"; color: black; line-height: 160%; mso-font-kerning: 0pt">Weekly Schedule</span></p> |
| − | <table | + | <table style="border-collapse: collapse; mso-yfti-tbllook: 1184; mso-padding-alt: 0cm 0cm 0cm 0cm" cellspacing="0" cellpadding="0" border="0"> |
<tbody> | <tbody> | ||
| − | <tr style="mso-yfti-irow:0;mso-yfti-firstrow:yes | + | <tr style="height: 14.7pt; mso-yfti-irow: 0; mso-yfti-firstrow: yes"> |
| − | <td | + | <td style="border-top: black 1pt solid; height: 14.7pt; border-right: black 1pt solid; width: 40.8pt; background: rgb(214,214,214); border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: black 1pt solid; padding-right: 1.4pt; border-image: none; mso-border-alt: solid black .25pt" width="54"> |
| − | <p style=" | + | <p style="word-break: keep-all; text-align: center; margin: 0cm 0cm 0pt; line-height: 160%; mso-pagination: widow-orphan" align="center"><span lang="EN-US" style="font-family: "Arial Unicode MS"; color: black; line-height: 160%; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt"><font size="2">Week</font></span></p> |
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| − | <td | + | <td style="border-top: black 1pt solid; height: 14.7pt; border-right: black 1pt solid; width: 410.2pt; background: rgb(214,214,214); border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: rgb(0,0,0) 0px; padding-right: 1.4pt; border-image: none; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt" width="547"> |
| − | <p style=" | + | <p style="word-break: keep-all; text-align: center; margin: 0cm 0cm 0pt; line-height: 160%; mso-pagination: widow-orphan" align="center"><span lang="EN-US" style="font-family: "Arial Unicode MS"; color: black; line-height: 160%; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt"><font size="2">Contents</font></span></p> |
</td> | </td> | ||
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| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 40.8pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: black 1pt solid; padding-right: 1.4pt; background-color: transparent; border-image: none; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="54"> |
| − | <p style=" | + | <p style="word-break: keep-all; text-align: center; margin: 0cm 0cm 0pt; mso-pagination: widow-orphan" align="center"><span lang="EN-US" style="font-family: "Arial Unicode MS"; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt"><font size="2">01</font></span></p> |
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| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 410.2pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: rgb(0,0,0) 0px; padding-right: 1.4pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="547"> |
| − | <p style="margin: 0cm 0cm 0pt | + | <p style="margin: 0cm 0cm 0pt"><span lang="EN-US" style="font-family: "바탕",serif; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt; mso-bidi-font-family: 굴림"><span style="mso-spacerun: yes"><font size="2"> </font></span></span><span lang="EN-US"><font size="2" face="맑은 고딕">What is life, information, and the universe? (as information processing objects)</font></span></p> |
| − | <p style=" | + | <p style="word-break: keep-all; text-align: left; margin: 0cm 0cm 0pt; text-indent: 5pt; mso-pagination: widow-orphan; mso-char-indent-count: .5" align="left"><span lang="EN-US"><font size="2" face="맑은 고딕">Introduction to the course.</font></span></p> |
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| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 40.8pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: black 1pt solid; padding-right: 1.4pt; background-color: transparent; border-image: none; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="54"> |
| − | <p style=" | + | <p style="word-break: keep-all; text-align: center; margin: 0cm 0cm 0pt; mso-pagination: widow-orphan" align="center"><span lang="EN-US" style="font-family: "Arial Unicode MS"; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt"><font size="2">02</font></span></p> |
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| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 410.2pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: rgb(0,0,0) 0px; padding-right: 1.4pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="547"> |
| − | <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0 | + | <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0"><span lang="EN-US"><font size="2" face="맑은 고딕">What is Sequencing in Genomics and Omics? (as an approach of understanding life)</font></span></p> |
| − | <p style=" | + | <p style="word-break: keep-all; text-align: left; margin: 0cm 0cm 0pt; text-indent: 5pt; mso-pagination: widow-orphan; mso-char-indent-count: .5" align="left"><span lang="EN-US"><font size="2" face="맑은 고딕">Sequencing<br style="mso-special-character: line-break" /> |
| − | </font> | + | </font><br style="mso-special-character: line-break" /> |
</span></p> | </span></p> | ||
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| − | <tr style="mso-yfti-irow:3 | + | <tr style="height: 35.65pt; mso-yfti-irow: 3"> |
| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 40.8pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: black 1pt solid; padding-right: 1.4pt; background-color: transparent; border-image: none; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="54"> |
| − | <p style=" | + | <p style="word-break: keep-all; text-align: center; margin: 0cm 0cm 0pt; mso-pagination: widow-orphan" align="center"><span lang="EN-US" style="font-family: "Arial Unicode MS"; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt"><font size="2">03</font></span></p> |
</td> | </td> | ||
| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 410.2pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: rgb(0,0,0) 0px; padding-right: 1.4pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="547"> |
| − | <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0 | + | <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0"><span lang="EN-US"><font size="2" face="맑은 고딕">What is alignment, assembly, functional annotation for 'Big data' processing in biology?</font></span></p> |
| − | <p style=" | + | <p style="word-break: keep-all; text-align: left; margin: 0cm 0cm 0pt; text-indent: 25pt; mso-pagination: widow-orphan; mso-char-indent-count: 2.5" align="left"><span lang="EN-US"><font size="2" face="맑은 고딕">Open source tools, concepts of alignment of DNA sequences.<br style="mso-special-character: line-break" /> |
| − | </font> | + | </font><br style="mso-special-character: line-break" /> |
</span></p> | </span></p> | ||
</td> | </td> | ||
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| − | <tr style="mso-yfti-irow:4 | + | <tr style="height: 35.65pt; mso-yfti-irow: 4"> |
| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 40.8pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: black 1pt solid; padding-right: 1.4pt; background-color: transparent; border-image: none; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="54"> |
| − | <p style=" | + | <p style="word-break: keep-all; text-align: center; margin: 0cm 0cm 0pt; mso-pagination: widow-orphan" align="center"><span lang="EN-US" style="font-family: "Arial Unicode MS"; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt"><font size="2">04</font></span></p> |
</td> | </td> | ||
| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 410.2pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: rgb(0,0,0) 0px; padding-right: 1.4pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="547"> |
| − | <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0 | + | <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0"><span lang="EN-US"><font size="2" face="맑은 고딕">How molecules and cells propagate in the universe? Evolution.</font></span></p> |
| − | <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0 | + | <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0"><span lang="EN-US"><font size="2" face="맑은 고딕">Close species Comparative Genomics (CSCG) for diverse genome evolution.</font></span></p> |
| − | <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0 | + | <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0"><span lang="EN-US"><font size="2" face="맑은 고딕">Phylogenetic tree.</font></span></p> |
| − | <p style=" | + | <p style="word-break: keep-all; text-align: left; margin: 0cm 0cm 0pt; mso-pagination: widow-orphan" align="left"><span lang="EN-US"><font size="2" face="맑은 고딕">Evolution</font></span></p> |
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| − | <p style=" | + | <p style="word-break: keep-all; text-align: center; margin: 0cm 0cm 0pt; mso-pagination: widow-orphan" align="center"><span lang="EN-US" style="font-family: "Arial Unicode MS"; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt"><font size="2">05</font></span></p> |
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| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 410.2pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: rgb(0,0,0) 0px; padding-right: 1.4pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="547"> |
| − | <p style=" | + | <p style="word-break: keep-all; text-align: left; margin: 0cm 0cm 0pt; mso-pagination: widow-orphan" align="left"><span lang="EN-US" style="font-family: "바탕",serif; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt; mso-bidi-font-family: 굴림"><font size="2">Human genomes</font></span></p> |
| − | <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0 | + | <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0"><span lang="EN-US" style="font-family: "바탕",serif; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt; mso-bidi-font-family: 굴림"><span style="mso-spacerun: yes"><font size="2"> </font></span><font size="2">KPGP, KOREF, [[The first Korean genome]]</font></span></p> |
| − | <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0 | + | <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0"> </p> |
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| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 40.8pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: black 1pt solid; padding-right: 1.4pt; background-color: transparent; border-image: none; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="54"> |
| − | <p style=" | + | <p style="word-break: keep-all; text-align: center; margin: 0cm 0cm 0pt; mso-pagination: widow-orphan" align="center"><span lang="EN-US" style="font-family: "Arial Unicode MS"; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt"><font size="2">06</font></span></p> |
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| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 410.2pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: rgb(0,0,0) 0px; padding-right: 1.4pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="547"> |
| − | <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0 | + | <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0"><span lang="EN-US"><font size="2" face="맑은 고딕">Genome analyses cases</font></span></p> |
| − | <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0 | + | <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0"><span lang="EN-US" style="font-family: "바탕",serif; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt; mso-bidi-font-family: 굴림"><span style="mso-spacerun: yes"><font size="2"> </font></span></span><span lang="EN-US"><font size="2" face="맑은 고딕">Whale genomics</font></span></p> |
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| − | <tr style="mso-yfti-irow:7 | + | <tr style="height: 35.65pt; mso-yfti-irow: 7"> |
| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 40.8pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: black 1pt solid; padding-right: 1.4pt; background-color: transparent; border-image: none; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="54"> |
| − | <p style=" | + | <p style="word-break: keep-all; text-align: center; margin: 0cm 0cm 0pt; mso-pagination: widow-orphan" align="center"><span lang="EN-US" style="font-family: "Arial Unicode MS"; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt"><font size="2">07</font></span></p> |
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| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 410.2pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: rgb(0,0,0) 0px; padding-right: 1.4pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="547"> |
| − | <p style="margin: 0cm 0cm 0pt; text-indent: 5pt; mso-char-indent-count: .5 | + | <p style="margin: 0cm 0cm 0pt; text-indent: 5pt; mso-char-indent-count: .5"><span lang="EN-US"><font size="2" face="맑은 고딕">Genome analyses cases</font></span></p> |
| − | <p style=" | + | <p style="word-break: keep-all; text-align: left; margin: 0cm 0cm 0pt; text-indent: 5pt; mso-pagination: widow-orphan; mso-char-indent-count: .5" align="left"><span lang="EN-US" style="font-family: "바탕",serif; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt; mso-bidi-font-family: 굴림"><span style="mso-spacerun: yes"><font size="2"> </font></span><font size="2">Tiger genomes</font></span></p> |
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| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 40.8pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: black 1pt solid; padding-right: 1.4pt; background-color: transparent; border-image: none; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="54"> |
| − | <p style=" | + | <p style="word-break: keep-all; text-align: center; margin: 0cm 0cm 0pt; mso-pagination: widow-orphan" align="center"><span lang="EN-US" style="font-family: "Arial Unicode MS"; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt"><font size="2">08</font></span></p> |
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| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 410.2pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: rgb(0,0,0) 0px; padding-right: 1.4pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="547"> |
| − | <p style="margin: 0cm 0cm 0pt; text-indent: 5pt; mso-char-indent-count: .5 | + | <p style="margin: 0cm 0cm 0pt; text-indent: 5pt; mso-char-indent-count: .5"><span lang="EN-US" style="font-family: "바탕",serif; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt; mso-bidi-font-family: 굴림"><span style="mso-spacerun: yes"><font size="2"> </font></span></span><span lang="EN-US"><font size="2" face="맑은 고딕">Genome analyses cases</font></span></p> |
| − | <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0 | + | <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0"><span lang="EN-US" style="font-family: "바탕",serif; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt; mso-bidi-font-family: 굴림"><span style="mso-spacerun: yes"><font size="2"> </font></span><font size="2">Vulture genomes</font></span><span lang="EN-US"><font size="2" face="맑은 고딕"> </font></span><span lang="EN-US" style="font-family: "바탕",serif; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt; mso-bidi-font-family: 굴림"><font size="2"> </font></span></p> |
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</tr> | </tr> | ||
| − | <tr style="mso-yfti-irow:9 | + | <tr style="height: 35.65pt; mso-yfti-irow: 9"> |
| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 40.8pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: black 1pt solid; padding-right: 1.4pt; background-color: transparent; border-image: none; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="54"> |
| − | <p style=" | + | <p style="word-break: keep-all; text-align: center; margin: 0cm 0cm 0pt; mso-pagination: widow-orphan" align="center"><span lang="EN-US" style="font-family: "Arial Unicode MS"; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt"><font size="2">09</font></span></p> |
</td> | </td> | ||
| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 410.2pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: rgb(0,0,0) 0px; padding-right: 1.4pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="547"> |
| − | <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0 | + | <p style="margin: 0cm 0cm 0pt; text-indent: 10pt; mso-char-indent-count: 1.0"><span lang="EN-US" style="font-family: "바탕",serif; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt; mso-bidi-font-family: 굴림"><span style="mso-spacerun: yes"><font size="2"> </font></span></span><span lang="EN-US"><font size="2" face="맑은 고딕">Genome analyses cases (horse transcriptome)</font></span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
| − | <tr style="mso-yfti-irow:10 | + | <tr style="height: 35.65pt; mso-yfti-irow: 10"> |
| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 40.8pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: black 1pt solid; padding-right: 1.4pt; background-color: transparent; border-image: none; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="54"> |
| − | <p style=" | + | <p style="word-break: keep-all; text-align: center; margin: 0cm 0cm 0pt; mso-pagination: widow-orphan" align="center"><span lang="EN-US" style="font-family: "Arial Unicode MS"; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt"><font size="2">10</font></span></p> |
</td> | </td> | ||
| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 410.2pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: rgb(0,0,0) 0px; padding-right: 1.4pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="547"> |
| − | <p style="margin: 0cm 0cm 0pt | + | <p style="margin: 0cm 0cm 0pt"><span lang="EN-US"><font size="2" face="맑은 고딕">Curing Cancer using genomics (Oncomics)</font></span></p> |
| − | <p style="margin: 0cm 0cm 0pt | + | <p style="margin: 0cm 0cm 0pt"><span lang="EN-US"><span style="mso-spacerun: yes"><font size="2" face="맑은 고딕"> </font></span><font size="2" face="맑은 고딕">Analysing disease genomes</font></span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
| − | <tr style="mso-yfti-irow:11 | + | <tr style="height: 35.65pt; mso-yfti-irow: 11"> |
| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 40.8pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: black 1pt solid; padding-right: 1.4pt; background-color: transparent; border-image: none; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="54"> |
| − | <p style=" | + | <p style="word-break: keep-all; text-align: center; margin: 0cm 0cm 0pt; mso-pagination: widow-orphan" align="center"><span lang="EN-US" style="font-family: "Arial Unicode MS"; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt"><font size="2">11</font></span></p> |
</td> | </td> | ||
| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 410.2pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: rgb(0,0,0) 0px; padding-right: 1.4pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="547"> |
| − | <p style="margin: 0cm 0cm 0pt | + | <p style="margin: 0cm 0cm 0pt"><span lang="EN-US" style="font-family: "바탕",serif; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt; mso-bidi-font-family: 굴림"><span style="mso-spacerun: yes"><font size="2"> </font></span></span><span lang="EN-US"><font size="2" face="맑은 고딕">Curing Cancer using genomics (Oncomics)</font></span></p> |
| − | <p style="margin: 0cm 0cm 0pt | + | <p style="margin: 0cm 0cm 0pt"><span lang="EN-US"><span style="mso-spacerun: yes"><font size="2" face="맑은 고딕"> </font></span><font size="2" face="맑은 고딕">Diffuse type cancer analyses.</font></span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
| − | <tr style="mso-yfti-irow:12 | + | <tr style="height: 35.65pt; mso-yfti-irow: 12"> |
| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 40.8pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: black 1pt solid; padding-right: 1.4pt; background-color: transparent; border-image: none; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="54"> |
| − | <p style=" | + | <p style="word-break: keep-all; text-align: center; margin: 0cm 0cm 0pt; mso-pagination: widow-orphan" align="center"><span lang="EN-US" style="font-family: "Arial Unicode MS"; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt"><font size="2">12</font></span></p> |
</td> | </td> | ||
| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 410.2pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: rgb(0,0,0) 0px; padding-right: 1.4pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="547"> |
| − | <p style="margin: 0cm 0cm 0pt | + | <p style="margin: 0cm 0cm 0pt"><span lang="EN-US"><font size="2" face="맑은 고딕">Curing Aging using genomics (Geromics)</font></span></p> |
| − | <p style=" | + | <p style="word-break: keep-all; text-align: left; margin: 0cm 0cm 0pt; text-indent: 5pt; mso-pagination: widow-orphan; mso-char-indent-count: .5" align="left"><span lang="EN-US" style="font-family: "바탕",serif; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt; mso-bidi-font-family: 굴림"><span style="mso-spacerun: yes"><font size="2"> </font></span><font size="2">Measuring aging biologically</font></span></p> |
| − | <p style=" | + | <p style="word-break: keep-all; text-align: left; margin: 0cm 0cm 0pt; text-indent: 5pt; mso-pagination: widow-orphan; mso-char-indent-count: .5" align="left"><span lang="EN-US" style="font-family: "바탕",serif; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt; mso-bidi-font-family: 굴림"><span style="mso-spacerun: yes"><font size="2"> </font></span><font size="2">Telomics</font></span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
| − | <tr style="mso-yfti-irow:13 | + | <tr style="height: 35.65pt; mso-yfti-irow: 13"> |
| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 40.8pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: black 1pt solid; padding-right: 1.4pt; background-color: transparent; border-image: none; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="54"> |
| − | <p style=" | + | <p style="word-break: keep-all; text-align: center; margin: 0cm 0cm 0pt; mso-pagination: widow-orphan" align="center"><span lang="EN-US" style="font-family: "Arial Unicode MS"; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt"><font size="2">13</font></span></p> |
</td> | </td> | ||
| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 410.2pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: rgb(0,0,0) 0px; padding-right: 1.4pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="547"> |
| − | <p style="margin: 0cm 0cm 0pt | + | <p style="margin: 0cm 0cm 0pt"><span lang="EN-US" style="font-family: "바탕",serif; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt; mso-bidi-font-family: 굴림"><span style="mso-spacerun: yes"><font size="2"> </font></span></span><span lang="EN-US"><font size="2" face="맑은 고딕">Curing Aging using genomics (Geromics)</font></span></p> |
| − | <p style=" | + | <p style="word-break: keep-all; text-align: left; margin: 0cm 0cm 0pt; text-indent: 10.2pt; mso-pagination: widow-orphan" align="left"><span lang="EN-US"><font size="2" face="맑은 고딕">Aging related keywords and genes</font></span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
| − | <tr style="mso-yfti-irow:14 | + | <tr style="height: 35.65pt; mso-yfti-irow: 14"> |
| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 40.8pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: black 1pt solid; padding-right: 1.4pt; background-color: transparent; border-image: none; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="54"> |
| − | <p style=" | + | <p style="word-break: keep-all; text-align: center; margin: 0cm 0cm 0pt; mso-pagination: widow-orphan" align="center"><span lang="EN-US" style="font-family: "Arial Unicode MS"; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt"><font size="2">14</font></span></p> |
</td> | </td> | ||
| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 410.2pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: rgb(0,0,0) 0px; padding-right: 1.4pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="547"> |
| − | <p style=" | + | <p style="word-break: keep-all; text-align: left; margin: 0cm 0cm 0pt; mso-pagination: widow-orphan" align="left"><span lang="EN-US" style="font-family: "바탕",serif; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt; mso-bidi-font-family: 굴림"><span style="mso-spacerun: yes"><font size="2"> </font></span><font size="2">Research Report presentation (Students presentation)</font></span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
| − | <tr style="mso-yfti-irow:15;mso-yfti-lastrow:yes | + | <tr style="height: 35.65pt; mso-yfti-irow: 15; mso-yfti-lastrow: yes"> |
| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 40.8pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: black 1pt solid; padding-right: 1.4pt; background-color: transparent; border-image: none; mso-border-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="54"> |
| − | <p style=" | + | <p style="word-break: keep-all; text-align: center; margin: 0cm 0cm 0pt; mso-pagination: widow-orphan" align="center"><span lang="EN-US" style="font-family: "Arial Unicode MS"; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt"><font size="2">15</font></span></p> |
</td> | </td> | ||
| − | <td | + | <td style="border-top: rgb(0,0,0) 0px; height: 35.65pt; border-right: black 1pt solid; width: 410.2pt; border-bottom: black 1pt solid; padding-bottom: 1.4pt; padding-top: 1.4pt; padding-left: 1.4pt; border-left: rgb(0,0,0) 0px; padding-right: 1.4pt; background-color: transparent; mso-border-alt: solid black .25pt; mso-border-left-alt: solid black .25pt; mso-border-top-alt: solid black .25pt" width="547"> |
| − | <p style=" | + | <p style="word-break: keep-all; text-align: left; margin: 0cm 0cm 0pt; mso-pagination: widow-orphan" align="left"><span lang="EN-US" style="font-family: "바탕",serif; color: black; mso-font-kerning: 0pt; mso-bidi-font-size: 10.0pt; mso-bidi-font-family: 굴림"><span style="mso-spacerun: yes"><font size="2"> </font></span><font size="2">Research Report presentation</font></span></p> |
</td> | </td> | ||
</tr> | </tr> | ||
</tbody> | </tbody> | ||
</table> | </table> | ||
| − | <p style="margin: 0cm 0cm 0pt; line-height: 160% | + | <p style="word-break: keep-all; margin: 0cm 0cm 0pt; line-height: 160%; mso-pagination: widow-orphan"><span lang="EN-US"><font size="2" face="맑은 고딕"> </font></span></p> |
</span></div> | </span></div> | ||
</div> | </div> | ||
Revision as of 21:38, 16 October 2015
Jong Bhak's Genomics course syllabus.
Weekly Schedule
|
Week |
Contents |
|
01 |
What is life, information, and the universe? (as information processing objects) Introduction to the course. |
|
02 |
What is Sequencing in Genomics and Omics? (as an approach of understanding life) Sequencing |
|
03 |
What is alignment, assembly, functional annotation for 'Big data' processing in biology? Open source tools, concepts of alignment of DNA sequences. |
|
04 |
How molecules and cells propagate in the universe? Evolution. Close species Comparative Genomics (CSCG) for diverse genome evolution. Phylogenetic tree. Evolution |
|
05 |
Human genomes KPGP, KOREF, The first Korean genome
|
|
06 |
Genome analyses cases Whale genomics |
|
07 |
Genome analyses cases Tiger genomes |
|
08 |
Genome analyses cases Vulture genomes |
|
09 |
Genome analyses cases (horse transcriptome) |
|
10 |
Curing Cancer using genomics (Oncomics) Analysing disease genomes |
|
11 |
Curing Cancer using genomics (Oncomics) Diffuse type cancer analyses. |
|
12 |
Curing Aging using genomics (Geromics) Measuring aging biologically Telomics |
|
13 |
Curing Aging using genomics (Geromics) Aging related keywords and genes |
|
14 |
Research Report presentation (Students presentation) |
|
15 |
Research Report presentation |
