Difference between revisions of "UNIST Omics special lecture 2023"
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Go back to [[UNIST_Omics_course|UNIST Omics course]]<br/> <br/> | Go back to [[UNIST_Omics_course|UNIST Omics course]]<br/> <br/> | ||
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=== Course Information === | === Course Information === | ||
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{| border="1" cellpadding="1" cellspacing="1" width="988" | {| border="1" cellpadding="1" cellspacing="1" width="988" | ||
|- | |- | ||
| − | | style="text-align: center; | + | | style="text-align: center; background-color: rgb(238, 238, 238)" | Course Code |
| BME80101 | | BME80101 | ||
| − | | style="text-align: center; | + | | style="text-align: center; background-color: rgb(238, 238, 238)" | Course Title |
| Special Lectures in Biomedical Engineering A (Omics) | | Special Lectures in Biomedical Engineering A (Omics) | ||
|- | |- | ||
| − | | style="text-align: center; | + | | style="text-align: center; background-color: rgb(238, 238, 238)" | Year/Semester |
| 2023 / 2nd Semester | | 2023 / 2nd Semester | ||
| − | | style="text-align: center; | + | | style="text-align: center; background-color: rgb(238, 238, 238)" | School |
| Department of Biomedical Engineering | | Department of Biomedical Engineering | ||
|- | |- | ||
| − | | style="text-align: center; | + | | style="text-align: center; background-color: rgb(238, 238, 238)" | Class Time |
| FRI 16:00-18:45 (110-301) | | FRI 16:00-18:45 (110-301) | ||
| − | | style="text-align: center; | + | | style="text-align: center; background-color: rgb(238, 238, 238)" | Grading Type |
| Letter Grade | | Letter Grade | ||
|} | |} | ||
| + | | ||
=== Instructor Information === | === Instructor Information === | ||
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{| border="1" cellpadding="1" cellspacing="1" style="width: 500px" | {| border="1" cellpadding="1" cellspacing="1" style="width: 500px" | ||
|- | |- | ||
| − | | style="text-align: center; | + | | style="text-align: center; background-color: rgb(238, 238, 238)" | Instructor |
| Jong Hwa Bhak<br/> 박종화 | | Jong Hwa Bhak<br/> 박종화 | ||
|- | |- | ||
| − | | style="text-align: center; | + | | style="text-align: center; background-color: rgb(238, 238, 238)" | Office |
| | | | ||
|- | |- | ||
| − | | style="text-align: center; | + | | style="text-align: center; background-color: rgb(238, 238, 238)" | Tel |
| − | | | + | | 010-4644-6754 |
|- | |- | ||
| − | | style="text-align: center; | + | | style="text-align: center; background-color: rgb(238, 238, 238)" | E-mail |
| jongbhak@unist.ac.kr | | jongbhak@unist.ac.kr | ||
|- | |- | ||
| − | | style="text-align: center; | + | | style="text-align: center; background-color: rgb(238, 238, 238)" | Office Hours |
| − | | 09:00-23:00 | + | | 09:00 - 23:00 |
|} | |} | ||
| Line 60: | Line 62: | ||
#Aging and Cancer. | #Aging and Cancer. | ||
#Omics based Diagnomics | #Omics based Diagnomics | ||
| − | #Geromics: Aging omics. | + | #Geromics: Aging omics. |
| + | | ||
=== Remarks === | === Remarks === | ||
| − | Topic Research discussion and presentation (100%) Self-Critical Scientific Assessment (SELF): Writing research papers on the course.<br/> Each week, before, class, students are asked to present on omics topics that are related to evolution theories.<br/> The final grade will be given by the quality of research reports and presentations (in English)<br/> <br/> The important points of grading are:<br/> 1. Being scientific in reasoning and presenting (reports and presentation)<br/> 2. Critical thinking level (showing in various communications such as reports)<br/> 3. Being independent in thinking (showing in various communications such as reports) | + | Topic Research discussion and presentation (100%)<br/> <br/> '''Self-Critical Scientific Assessment (SELF): Writing research papers on the course.'''<br/> Each week, before, class, students are asked to present on omics topics that are related to evolution theories.<br/> The final grade will be given by the quality of research reports and presentations (in English)<br/> <br/> The important points of grading are:<br/> 1. Being scientific in reasoning and presenting (reports and presentation)<br/> 2. Critical thinking level (showing in various communications such as reports)<br/> 3. Being independent in thinking (showing in various communications such as reports) |
| − | |||
=== Weekly Schedule === | === Weekly Schedule === | ||
| Line 72: | Line 74: | ||
{| style="border-collapse: collapse" width="605" | {| style="border-collapse: collapse" width="605" | ||
|- | |- | ||
| − | | class="xl65" style="border-width: 1px; | + | | class="xl65" style="border-width: 1px; border-style: solid; border-color: black; height: 23px; width: 70px; padding-top: 1px; padding-right: 1px; padding-left: 1px; vertical-align: middle; white-space: nowrap; text-align: center" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">Week</span></span></span></span></span></span> |
| − | | class="xl65" style="border-width: 1px 1px 1px medium; | + | | class="xl65" style="border-width: 1px 1px 1px medium; border-style: solid solid solid none; border-color: black black black currentcolor; width: 70px; padding-top: 1px; padding-right: 1px; padding-left: 1px; vertical-align: middle; white-space: nowrap; text-align: center" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">Contents</span></span></span></span></span></span> |
|- | |- | ||
| − | | class="xl65" style="border-width: medium 1px 1px; | + | | class="xl65" style="border-width: medium 1px 1px; border-style: none solid solid; border-color: currentcolor black black; height: 23px; padding-top: 1px; padding-right: 1px; padding-left: 1px; vertical-align: middle; white-space: nowrap; text-align: center" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">1</span></span></span></span></span></span> |
| − | | class="xl65" style="border-bottom:1px solid black; | + | | class="xl65" style="border-bottom:1px solid black; padding-top:1px; padding-right:1px; padding-left:1px; vertical-align:middle; white-space:nowrap; border-top:none; border-right:1px solid black; border-left:none" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">Course introduction:</span></span></span></span></span></span> |
|- | |- | ||
| − | | class="xl65" style="border-width: medium 1px 1px; | + | | class="xl65" style="border-width: medium 1px 1px; border-style: none solid solid; border-color: currentcolor black black; height: 23px; padding-top: 1px; padding-right: 1px; padding-left: 1px; vertical-align: middle; white-space: nowrap; text-align: center" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">2</span></span></span></span></span></span> |
| − | | class="xl65" style="border-bottom:1px solid black; | + | | class="xl65" style="border-bottom:1px solid black; padding-top:1px; padding-right:1px; padding-left:1px; vertical-align:middle; white-space:nowrap; border-top:none; border-right:1px solid black; border-left:none" | [http://biolecture.org/Life_is_information <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">What is life, information, and the universe? </span></span></span></span></span></span>] |
|- | |- | ||
| − | | class="xl65" style="border-width: medium 1px 1px; | + | | class="xl65" style="border-width: medium 1px 1px; border-style: none solid solid; border-color: currentcolor black black; height: 23px; padding-top: 1px; padding-right: 1px; padding-left: 1px; vertical-align: middle; white-space: nowrap; text-align: center" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">3</span></span></span></span></span></span> |
| − | | class="xl65" style="border-bottom:1px solid black; | + | | class="xl65" style="border-bottom:1px solid black; padding-top:1px; padding-right:1px; padding-left:1px; vertical-align:middle; white-space:nowrap; border-top:none; border-right:1px solid black; border-left:none" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">[[What_is_science,_biology,_and_omics?|What is science, biology, and omics?]]</span></span></span></span></span></span> |
|- | |- | ||
| − | | class="xl65" style="border-width: medium 1px 1px; | + | | class="xl65" style="border-width: medium 1px 1px; border-style: none solid solid; border-color: currentcolor black black; height: 23px; padding-top: 1px; padding-right: 1px; padding-left: 1px; vertical-align: middle; white-space: nowrap; text-align: center" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">4</span></span></span></span></span></span> |
| − | | class="xl65" style="border-bottom:1px solid black; | + | | class="xl65" style="border-bottom:1px solid black; padding-top:1px; padding-right:1px; padding-left:1px; vertical-align:middle; white-space:nowrap; border-top:none; border-right:1px solid black; border-left:none" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">[[What are Darwin’s evolutionary theories?]]</span></span></span></span></span></span> |
|- | |- | ||
| − | | class="xl65" style="border-width: medium 1px 1px; | + | | class="xl65" style="border-width: medium 1px 1px; border-style: none solid solid; border-color: currentcolor black black; height: 23px; padding-top: 1px; padding-right: 1px; padding-left: 1px; vertical-align: middle; white-space: nowrap; text-align: center" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">5</span></span></span></span></span></span> |
| − | | class="xl65" style="border-bottom:1px solid black; | + | | class="xl65" style="border-bottom:1px solid black; padding-top:1px; padding-right:1px; padding-left:1px; vertical-align:middle; white-space:nowrap; border-top:none; border-right:1px solid black; border-left:none" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">Genomics</span></span></span></span></span></span> |
|- | |- | ||
| − | | class="xl65" style="border-width: medium 1px 1px; | + | | class="xl65" style="border-width: medium 1px 1px; border-style: none solid solid; border-color: currentcolor black black; height: 23px; padding-top: 1px; padding-right: 1px; padding-left: 1px; vertical-align: middle; white-space: nowrap; text-align: center" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">6</span></span></span></span></span></span> |
| − | | class="xl65" style="border-bottom:1px solid black; | + | | class="xl65" style="border-bottom:1px solid black; padding-top:1px; padding-right:1px; padding-left:1px; vertical-align:middle; white-space:nowrap; border-top:none; border-right:1px solid black; border-left:none" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">Epigenomics </span></span></span></span></span></span> |
|- | |- | ||
| − | | class="xl65" style="border-width: medium 1px 1px; | + | | class="xl65" style="border-width: medium 1px 1px; border-style: none solid solid; border-color: currentcolor black black; height: 23px; padding-top: 1px; padding-right: 1px; padding-left: 1px; vertical-align: middle; white-space: nowrap; text-align: center" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">7</span></span></span></span></span></span> |
| − | | class="xl65" style="border-bottom:1px solid black; | + | | class="xl65" style="border-bottom:1px solid black; padding-top:1px; padding-right:1px; padding-left:1px; vertical-align:middle; white-space:nowrap; border-top:none; border-right:1px solid black; border-left:none" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">Epigenomics</span></span></span></span></span></span> |
|- | |- | ||
| − | | class="xl65" style="border-width: medium 1px 1px; | + | | class="xl65" style="border-width: medium 1px 1px; border-style: none solid solid; border-color: currentcolor black black; height: 23px; padding-top: 1px; padding-right: 1px; padding-left: 1px; vertical-align: middle; white-space: nowrap; text-align: center" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">8</span></span></span></span></span></span> |
| − | | class="xl65" style="border-bottom:1px solid black; | + | | class="xl65" style="border-bottom:1px solid black; padding-top:1px; padding-right:1px; padding-left:1px; vertical-align:middle; white-space:nowrap; border-top:none; border-right:1px solid black; border-left:none" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">Transcriptomics </span></span></span></span></span></span> |
|- | |- | ||
| − | | class="xl65" style="border-width: medium 1px 1px; | + | | class="xl65" style="border-width: medium 1px 1px; border-style: none solid solid; border-color: currentcolor black black; height: 23px; padding-top: 1px; padding-right: 1px; padding-left: 1px; vertical-align: middle; white-space: nowrap; text-align: center" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">9</span></span></span></span></span></span> |
| − | | class="xl65" style="border-bottom:1px solid black; | + | | class="xl65" style="border-bottom:1px solid black; padding-top:1px; padding-right:1px; padding-left:1px; vertical-align:middle; white-space:nowrap; border-top:none; border-right:1px solid black; border-left:none" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">Transcriptomics </span></span></span></span></span></span> |
|- | |- | ||
| − | | class="xl65" style="border-width: medium 1px 1px; | + | | class="xl65" style="border-width: medium 1px 1px; border-style: none solid solid; border-color: currentcolor black black; height: 23px; padding-top: 1px; padding-right: 1px; padding-left: 1px; vertical-align: middle; white-space: nowrap; text-align: center" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">10</span></span></span></span></span></span> |
| − | | class="xl65" style="border-bottom:1px solid black; | + | | class="xl65" style="border-bottom:1px solid black; padding-top:1px; padding-right:1px; padding-left:1px; vertical-align:middle; white-space:nowrap; border-top:none; border-right:1px solid black; border-left:none" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">Cancer </span></span></span></span></span></span> |
|- | |- | ||
| − | | class="xl65" style="border-width: medium 1px 1px; | + | | class="xl65" style="border-width: medium 1px 1px; border-style: none solid solid; border-color: currentcolor black black; height: 23px; padding-top: 1px; padding-right: 1px; padding-left: 1px; vertical-align: middle; white-space: nowrap; text-align: center" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">11</span></span></span></span></span></span> |
| − | | class="xl65" style="border-bottom:1px solid black; | + | | class="xl65" style="border-bottom:1px solid black; padding-top:1px; padding-right:1px; padding-left:1px; vertical-align:middle; white-space:nowrap; border-top:none; border-right:1px solid black; border-left:none" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">Cancer</span></span></span></span></span></span> |
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| − | | class="xl65" style="border-width: medium 1px 1px; | + | | class="xl65" style="border-width: medium 1px 1px; border-style: none solid solid; border-color: currentcolor black black; height: 23px; padding-top: 1px; padding-right: 1px; padding-left: 1px; vertical-align: middle; white-space: nowrap; text-align: center" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">12</span></span></span></span></span></span> |
| − | | class="xl65" style="border-bottom:1px solid black; | + | | class="xl65" style="border-bottom:1px solid black; padding-top:1px; padding-right:1px; padding-left:1px; vertical-align:middle; white-space:nowrap; border-top:none; border-right:1px solid black; border-left:none" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">Omics based Diagnomics </span></span></span></span></span></span> |
|- | |- | ||
| − | | class="xl65" style="border-width: medium 1px 1px; | + | | class="xl65" style="border-width: medium 1px 1px; border-style: none solid solid; border-color: currentcolor black black; height: 23px; padding-top: 1px; padding-right: 1px; padding-left: 1px; vertical-align: middle; white-space: nowrap; text-align: center" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">13</span></span></span></span></span></span> |
| − | | class="xl65" style="border-bottom:1px solid black; | + | | class="xl65" style="border-bottom:1px solid black; padding-top:1px; padding-right:1px; padding-left:1px; vertical-align:middle; white-space:nowrap; border-top:none; border-right:1px solid black; border-left:none" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">Omics based Diagnomics </span></span></span></span></span></span> |
|- | |- | ||
| − | | class="xl65" style="border-width: medium 1px 1px; | + | | class="xl65" style="border-width: medium 1px 1px; border-style: none solid solid; border-color: currentcolor black black; height: 23px; padding-top: 1px; padding-right: 1px; padding-left: 1px; vertical-align: middle; white-space: nowrap; text-align: center" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">14</span></span></span></span></span></span> |
| − | | class="xl65" style="border-bottom:1px solid black; | + | | class="xl65" style="border-bottom:1px solid black; padding-top:1px; padding-right:1px; padding-left:1px; vertical-align:middle; white-space:nowrap; border-top:none; border-right:1px solid black; border-left:none" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">Geromics: Aging omics</span></span></span></span></span></span> |
|- | |- | ||
| − | | class="xl65" style="border-width: medium 1px 1px; | + | | class="xl65" style="border-width: medium 1px 1px; border-style: none solid solid; border-color: currentcolor black black; height: 23px; padding-top: 1px; padding-right: 1px; padding-left: 1px; vertical-align: middle; white-space: nowrap; text-align: center" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">15</span></span></span></span></span></span> |
| − | | class="xl65" style="border-bottom:1px solid black; | + | | class="xl65" style="border-bottom:1px solid black; padding-top:1px; padding-right:1px; padding-left:1px; vertical-align:middle; white-space:nowrap; border-top:none; border-right:1px solid black; border-left:none" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">Presentation and Evaluation</span></span></span></span></span></span> |
|- | |- | ||
| − | | class="xl65" style="border-width: medium 1px 1px; | + | | class="xl65" style="border-width: medium 1px 1px; border-style: none solid solid; border-color: currentcolor black black; height: 23px; padding-top: 1px; padding-right: 1px; padding-left: 1px; vertical-align: middle; white-space: nowrap; text-align: center" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">16</span></span></span></span></span></span> |
| − | | class="xl65" style="border-bottom:1px solid black; | + | | class="xl65" style="border-bottom:1px solid black; padding-top:1px; padding-right:1px; padding-left:1px; vertical-align:middle; white-space:nowrap; border-top:none; border-right:1px solid black; border-left:none" | <span style="font-size:15px"><span style="color:black"><span style="font-weight:400"><span style="font-style:normal"><span style="text-decoration:none"><span style="font-family:">Presentation and Evaluation</span></span></span></span></span></span> |
|} | |} | ||
<br/> <br/> Go back to [[UNIST_Omics_course|UNIST Omics course]] | <br/> <br/> Go back to [[UNIST_Omics_course|UNIST Omics course]] | ||
Latest revision as of 10:16, 22 September 2023
Go back to UNIST Omics course
Contents
Course Information
| Course Code | BME80101 | Course Title | Special Lectures in Biomedical Engineering A (Omics) |
| Year/Semester | 2023 / 2nd Semester | School | Department of Biomedical Engineering |
| Class Time | FRI 16:00-18:45 (110-301) | Grading Type | Letter Grade |
Instructor Information
| Instructor | Jong Hwa Bhak 박종화 |
| Office | |
| Tel | 010-4644-6754 |
| jongbhak@unist.ac.kr | |
| Office Hours | 09:00 - 23:00 |
Course Objectives & Description
Omics is a systematic naming of various fields of biology and biotechnology. There are many –omics subfields such as genomics, transcriptomics, and proteomics. I provide students with latest omics research topics with insights on the evolutionary theories.
- Intro:
- How to study
- How to research.
- Principles: What is life, information, and the universe? (as information processing objects) Fractality of evolution, encapsulation, and information propagation
- Genomics.
- Epigenomics: Environment and biological information objects and their interaction
- Transcriptomics
- Aging and Cancer.
- Omics based Diagnomics
- Geromics: Aging omics.
Remarks
Topic Research discussion and presentation (100%)
Self-Critical Scientific Assessment (SELF): Writing research papers on the course.
Each week, before, class, students are asked to present on omics topics that are related to evolution theories.
The final grade will be given by the quality of research reports and presentations (in English)
The important points of grading are:
1. Being scientific in reasoning and presenting (reports and presentation)
2. Critical thinking level (showing in various communications such as reports)
3. Being independent in thinking (showing in various communications such as reports)
Weekly Schedule
| Week | Contents |
| 1 | Course introduction: |
| 2 | What is life, information, and the universe? |
| 3 | What is science, biology, and omics? |
| 4 | What are Darwin’s evolutionary theories? |
| 5 | Genomics |
| 6 | Epigenomics |
| 7 | Epigenomics |
| 8 | Transcriptomics |
| 9 | Transcriptomics |
| 10 | Cancer |
| 11 | Cancer |
| 12 | Omics based Diagnomics |
| 13 | Omics based Diagnomics |
| 14 | Geromics: Aging omics |
| 15 | Presentation and Evaluation |
| 16 | Presentation and Evaluation |
Go back to UNIST Omics course
