Secondary protein structure prediction programs

From Biolecture.org

I couldn’t success previous homework, programming the protein sequence program, so I use the amino acid sequence in the NCBI.

 

1. Find the amino acid sequence from the NCBI.

Ex) Antibody

 

 

> Sequence:

LFWIPASISDVVMTQTPLSLPVSLGDQASISCRSSQNLVHNNGNTYLYWFLQKSGQSPKLLIYRASIRFSGVPDRFSGSGSETDFTLKISRVEAEDLGVYFCFQGTHVPWTFGGGTKLEIK

 

 

2. Using protein structure predicting program, predict the secondary structure by using amino acid sequence.

> Prediction program website:

https://www.predictprotein.org/home#

 

 

 

> Results

 

 

 

 

 

 

> Other protein structure prediction program websites

https://en.wikipedia.org/wiki/List_of_protein_secondary_structure_prediction_programs

http://sparks-lab.org/server/SPIDER2/
 

 

> DNA to RNA to Protein sequencing program

http://www.attotron.com/cybertory/analysis/trans.htm

 

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