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Homework

50 bytes added, 19:53, 17 May 2016
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<p><strong>1. Learn&nbsp;<a href="http://biolecture.org/index.php/Perl" title="Perl">Perl</a>&nbsp;programming language and learn bioinformatics using it.</strong></p>
<p>&nbsp;[[1) .&nbsp;Install and Learn Bioperl]]&nbsp;</p>
<p>&nbsp;[[2) .&nbsp;Make a perl program translating &#39;all&#39; combinations of triple bases into amino acids]]</p>
<p>&nbsp;[[3) .&nbsp;Pick 5 protein sequences and predict their secondary structures using available prediction programs]]</p>
<p>&nbsp;[[4) .&nbsp;Open and re-write one FASTA file containing one protein sequence of TERT]]</p>
<p>&nbsp;[[5) .&nbsp;Create a FASTA file with a sequence. Open it and reverse the sequence of it and print it out in another FASTA file]]</p>
<p>&nbsp;[[6) .&nbsp;Extract a sequence MKKTGIKG from ASMKATAHQMKKTGIKGMSTYALLRL and print it out in a file]]</p>
<p>&nbsp;[[7) .&nbsp;In a multi-sequence FASTA file, produce statistics such as sequence number, average seq length, GC content, AT content, etc]]</p>
<p>&nbsp;[[8) .&nbsp;Align two protein sequences using a dynamic programming method in perl]]</p>
<p>&nbsp;[[9) .&nbsp;Randomly generate five 100 AA long protein sequences and store them in a FASTA file]]</p>
<p>&nbsp;[[10) .&nbsp;Create a flat text file database of protein sequences with has functino in Perl]]</p>
<p>&nbsp;</p>

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