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Transcriptomics

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<p>[[Transcriptomics]] &nbsp;class for UNIST 20152016</p>
<p><strong>1. What is transcriptomics?</strong></p>
<p>&nbsp;The study of&nbsp;<em>transcriptomics</em>, also referred to as expression profiling,&nbsp;examines the expression level of mRNAs in a given cell population, often using high-throughput techniques based on DNA microarray&nbsp;technology.&nbsp;</p>
<p><strong>2. Relationship between genomics and transcriptomics</strong></p>
<p>Genomics is the study of genomes, thet total genes in cell or organisms.</p>
<p>I think genomics is a larger field or study than transcriptomics. This is because the transcriptomes are based on gene.</p>
<p><strong>3. What are mRNAs?</strong></p>
<p>&nbsp;This is called messenger RNA.&nbsp;&nbsp;mRNA is a large family of RNA&nbsp;molecules that convey genetic information&nbsp;from DNA to the ribosome,&nbsp;where they specify the amino acid&nbsp;sequence of the protein&nbsp;products of gene expression. Following transcription of primary transcript&nbsp;mRNA (known as pre mRNA)&nbsp;by RNA polymerase, processed, mature mRNA is translated&nbsp;into a polymer of amino acids: a protein, as summarized in the central dogma of molecular biology.</p>
<p><strong>4. How to measure RNA expression?</strong></p>
<p>&nbsp;To measure the RNA expression, qPCR can be used.</p>
<p>5qPCR is quantitative PCR. Relationship between Transcriptome This is prevalently and Proteomewidely used in laboratory.</p>
<p>6<strong>5. What is a UTR?Relationship between Transcriptome and Proteome.</strong></p>
<p>7The proteome&nbsp;is the entire set of proteins expressed by a genome, cell, tissue, or organism at a certain time. What is ncRNAProteome comes from transcriptome. In the central dogma,&nbsp;?</p>
<p>8protein is the last step. What is poly ADNA -&gt; mRNA : transcription , RNA -&nbspgt;?protein : translation</p>
<p><strong>6. What is a UTR?</strong></p> <p>In molecular genetics, an untranslated region (or UTR) refers to either of two sections, one on each side of a coding sequence on a strand of mRNA.</p> <p><strong>7. What is ncRNA&nbsp;?</strong></p> <p>A non-coding RNA (<em>ncRNA</em>) is an RNA molecule that is not translated into a protein.</p> <p>Non-coding RNA genes include highly abundant and functionally important RNAs such as transfer RNAs&nbsp;(tRNAs) and ribosomal RNAs(rRNAs), as well as RNAs such as microRNAs, siRNAs.</p> <p><strong>8. What is poly A&nbsp;?</strong></p> <p>As its name it is, there are several As. To make this Poly A, there is needed polyadenylation.&nbsp;<strong>Polyadenylation</strong>&nbsp;is the addition of a&nbsp;<strong>poly(A) tail</strong>&nbsp;to a mRNA. The poly(A) tail consists of multiple adenosine monophosphates; in other words, it is a stretch of RNA that has only adenine&nbsp;bases. In eukaryotes, polyadenylation is part of the process that produces mature mRNA for translation. It, therefore, forms part of the larger process of gene expression.</p>
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