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Created page with "<p>FASTA format is an arranged sequence data file.</p> <p>FASTA file starts from > in the first row.</p> <p>This row contains basic information such as sequence ID.</p> <p>..."
<p>FASTA format is an arranged sequence data file.</p>
<p>FASTA file starts from > in the first row.</p>
<p>This row contains basic information such as sequence ID.</p>
<p>1. Go to the NCBI (<a href="http://www.ncbi.nlm.nih.gov/">http://www.ncbi.nlm.nih.gov/</a>) , National Center for Biotechnology Information</p>
<p>2. Choose the database that you want and search the information that you want to find</p>
<p>Ex) Database - Gene / Search - Homo sapiens chromosome 2 / Choose what you want to look at</p>
<p>3. Choose FASTA from the 'Go to nucleotide' section</p>
<p><sup>1)</sup><span style="background-color:rgb(245,245,255); color:rgb(0,0,0)">Display settings: FASTA</span><br />
<br />
<span style="background-color:rgb(245,245,255); color:rgb(0,0,0)">Send to: File</span><br />
<br />
<span style="background-color:rgb(245,245,255); color:rgb(0,0,0)">You get a link like this:</span><br />
<br />
<span style="background-color:rgb(245,245,255); color:rgb(0,0,0)"><a href="http://www.ncbi.nlm.nih.gov/sviewer/viewer.fcgi?tool=portal&sendto=on&log$=seqview&db=nuccore&dopt=fasta&val=51466650&extrafeat=0&maxplex=1">http://www.ncbi.nlm.nih.gov/sviewer/viewer.fcgi?tool=portal&sendto=on&log$=seqview&db=nuccore&dopt=fasta&val=51466650&extrafeat=0&maxplex=1</a></span></p>
<p> </p>
<h3><span style="background-color:rgb(245,245,255); color:rgb(0,0,0)">Reference</span></h3>
<p>1) <a href="http://seqanswers.com/forums/showthread.php?t=18354">http://seqanswers.com/forums/showthread.php?t=18354</a></p>
<p> </p>
<p>[[<a href="http://biolecture.org/index.php/KSH_0608_Bioinformatics_with_Bioperl" title="KSH 0608 Bioinformatics with Bioperl">KSH_0608 Bioinformatics with Bioperl</a>]]</p>
<p>FASTA file starts from > in the first row.</p>
<p>This row contains basic information such as sequence ID.</p>
<p>1. Go to the NCBI (<a href="http://www.ncbi.nlm.nih.gov/">http://www.ncbi.nlm.nih.gov/</a>) , National Center for Biotechnology Information</p>
<p>2. Choose the database that you want and search the information that you want to find</p>
<p>Ex) Database - Gene / Search - Homo sapiens chromosome 2 / Choose what you want to look at</p>
<p>3. Choose FASTA from the 'Go to nucleotide' section</p>
<p><sup>1)</sup><span style="background-color:rgb(245,245,255); color:rgb(0,0,0)">Display settings: FASTA</span><br />
<br />
<span style="background-color:rgb(245,245,255); color:rgb(0,0,0)">Send to: File</span><br />
<br />
<span style="background-color:rgb(245,245,255); color:rgb(0,0,0)">You get a link like this:</span><br />
<br />
<span style="background-color:rgb(245,245,255); color:rgb(0,0,0)"><a href="http://www.ncbi.nlm.nih.gov/sviewer/viewer.fcgi?tool=portal&sendto=on&log$=seqview&db=nuccore&dopt=fasta&val=51466650&extrafeat=0&maxplex=1">http://www.ncbi.nlm.nih.gov/sviewer/viewer.fcgi?tool=portal&sendto=on&log$=seqview&db=nuccore&dopt=fasta&val=51466650&extrafeat=0&maxplex=1</a></span></p>
<p> </p>
<h3><span style="background-color:rgb(245,245,255); color:rgb(0,0,0)">Reference</span></h3>
<p>1) <a href="http://seqanswers.com/forums/showthread.php?t=18354">http://seqanswers.com/forums/showthread.php?t=18354</a></p>
<p> </p>
<p>[[<a href="http://biolecture.org/index.php/KSH_0608_Bioinformatics_with_Bioperl" title="KSH 0608 Bioinformatics with Bioperl">KSH_0608 Bioinformatics with Bioperl</a>]]</p>
