<p><span style="font-size:20px"><strong>Subject : Learn Perl programming language and learn bioinformatics using it.</strong></span></p> <p><strong>1. Install and Learn BioPerl</strong></p> <p>Learn principle of perl</p> <p>https://qntm.org/files/perl/perl_kr.html</p> <p>install perl and editorCode for Translation DNA to AminoAcid (Padre the by Perl IDE)</pspan> <p>https://www.youtube.com/watch?time_continue=152&v=R05XpUH876I</p>
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<p><strong>2.Make a Perl program translating 'all' combinations of triple bases into amino acids</strong></p>
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<strong>3.Pick 5 protein sequences and predict their secondary structures using available prediction programs<br />
4.Open and re-write one FASTA file containing one protein sequence of TERT<br />
5.Create a FASTA file with a sequence. Open it and reverse the sequence of it and print it out in another FASTA file<br />
6.Extract a sequence MKKTGIKG from ASMKATAHQMKKTGIKGMSTYALLRL and print it out in a file<br />
7.In a multi-sequence FASTA file, produce statistics such as sequence number, average seq length, GC content, AT content, etc<br />
8.Align two protein sequences using a dynamic programming method in Perl<br />
9.Randomly generate five 100 AA long protein sequences and store them in a FASTA file<br />
10.Create a flat text file database of protein sequences with hash function in Perl</strong><br />
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