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From Biolecture.org
Created page with "<h2>Bioprogramming</h2> <p> </p> <ul> <li>How are you?</li> </ul> <p style="margin-left:40px">⇒ '안녕' 같은 그냥 인사. 한마디로 대답하면 된..."
<h2>Bioprogramming</h2>
<p> </p>
<ul>
<li>How are you?</li>
</ul>
<p style="margin-left:40px">⇒ '안녕' 같은 그냥 인사. 한마디로 대답하면 된다</p>
<h4><strong>PERL</strong></h4>
<table border="1" cellpadding="1" cellspacing="1" style="width:500px">
<tbody>
<tr>
<td>
<p>use strict;</p>
<p>use warning;</p>
<p> </p>
<p>my $word;</p>
</td>
</tr>
</tbody>
</table>
<ul>
<li>use : call / strict : library</li>
<li>warning : warning 해주는 program</li>
<li>my : memory의 section을 지정</li>
</ul>
<p style="margin-left:40px"><strong>*</strong> library란? set of (something)</p>
<p style="margin-left:40px">strict의 경우에는 set of program</p>
<p style="margin-left:40px"> </p>
<ul>
<li>variable</li>
</ul>
<p style="margin-left:40px">@ : array</p>
<p style="margin-left:40px">@ 밖에 있는 O를 box or cage라고 생각</p>
<p style="margin-left:40px">cage 안에 a를 넣는다 → set</p>
<p style="margin-left:40px">ex) (1,2,3,4,5)</p>
<p style="margin-left:40px"> </p>
<p style="margin-left:40px">% : hash</p>
<p style="margin-left:40px">%는 key와 value를 반으로 나눈다</p>
<p style="margin-left:40px">ex) (1,2/3,4,5)</p>
<p style="margin-left:40px"> </p>
<p style="margin-left:40px">$ : scalar</p>
<p style="margin-left:40px">$ 뒤에 오는 단어가 하나의 scalar가 된다</p>
<p style="margin-left:40px">ex) 1,2,3,4,5</p>
<p style="margin-left:40px"> </p>
<h4><strong>PROGRAMMING</strong></h4>
<ul>
<li>Programming : communication with computer / solve problem</li>
</ul>
<p style="margin-left:40px">* 수업도 하나의 problem이라고 볼 수있다. 그 과정을 풀어나가는 것이 programming이 되는 것</p>
<ul>
<li>Two aspect of bioprogramming</li>
</ul>
<ol>
<li>Bioprogramming as the natural process of information propagation in the universe</li>
<li>Bioprogramming as programming technique in bioinformatics</li>
</ol>
<ul>
<li>IT programming / bioinformatics programming이 다른가?</li>
<li><strong>Bioinformatics : Life를 해킹하는것</strong></li>
<li>Type of amino acid[1]</li>
</ul>
<p style="margin-left:40px"><img alt="" src="/ckfinder/userfiles/images/20-types-of-amino-acids1.jpg" style="height:491px; width:468px" /></p>
<ul>
<li>circuit : species의 whole genome network를 알 수 있다.</li>
<li>
<p>Life에서 특정 molecule이 어떤 기능을 하는지 알아보는 방법은?</p>
</li>
</ul>
<p style="margin-left:40px">⇒ suppress or activate</p>
<p> </p>
<h4><strong>NETWORK BIOLOGY</strong></h4>
<ul>
<li>
<h4>My SQL?[2] (Structured Query Language)</h4>
</li>
</ul>
<p style="margin-left:40px">⇒ an open-source relational database management system (RDBMS).</p>
<ul>
<li>What is compiler?</li>
</ul>
<p style="margin-left:40px">⇒ translate 하려면 rule이 필요하다 </p>
<p style="margin-left:40px">⇒ compiler = rule<strong>(grammar)</strong></p>
<ul>
<li>Machine code → C → Basic → C<sup>++</sup> → <strong>perl </strong>(high level language)</li>
<li>Noam Chomsky</li>
</ul>
<p style="margin-left:40px">⇒ an American linguist, philosopher, cognitive scientist, historian, social critic, and political activist.[3]</p>
<p style="margin-left:40px">⇒ "Universal grammar" 언어는 모두 다르지만 모든 언어의 back bone은 같다</p>
<ul>
<li>understanding life that mean understanding inside grammar</li>
</ul>
<p style="margin-left:40px">Human have "human grammar"</p>
<p style="margin-left:40px"> </p>
<p style="margin-left:40px"> </p>
<p>[1] https://amit1b.wordpress.com/the-molecules-of-life/about/amino-acids/</p>
<p>[2] https://en.wikipedia.org/wiki/MySQL</p>
<p>[3] https://en.wikipedia.org/wiki/Noam_Chomsky</p>
<hr />
<p> </p>
<p> </p>
<ul>
<li>How are you?</li>
</ul>
<p style="margin-left:40px">⇒ '안녕' 같은 그냥 인사. 한마디로 대답하면 된다</p>
<h4><strong>PERL</strong></h4>
<table border="1" cellpadding="1" cellspacing="1" style="width:500px">
<tbody>
<tr>
<td>
<p>use strict;</p>
<p>use warning;</p>
<p> </p>
<p>my $word;</p>
</td>
</tr>
</tbody>
</table>
<ul>
<li>use : call / strict : library</li>
<li>warning : warning 해주는 program</li>
<li>my : memory의 section을 지정</li>
</ul>
<p style="margin-left:40px"><strong>*</strong> library란? set of (something)</p>
<p style="margin-left:40px">strict의 경우에는 set of program</p>
<p style="margin-left:40px"> </p>
<ul>
<li>variable</li>
</ul>
<p style="margin-left:40px">@ : array</p>
<p style="margin-left:40px">@ 밖에 있는 O를 box or cage라고 생각</p>
<p style="margin-left:40px">cage 안에 a를 넣는다 → set</p>
<p style="margin-left:40px">ex) (1,2,3,4,5)</p>
<p style="margin-left:40px"> </p>
<p style="margin-left:40px">% : hash</p>
<p style="margin-left:40px">%는 key와 value를 반으로 나눈다</p>
<p style="margin-left:40px">ex) (1,2/3,4,5)</p>
<p style="margin-left:40px"> </p>
<p style="margin-left:40px">$ : scalar</p>
<p style="margin-left:40px">$ 뒤에 오는 단어가 하나의 scalar가 된다</p>
<p style="margin-left:40px">ex) 1,2,3,4,5</p>
<p style="margin-left:40px"> </p>
<h4><strong>PROGRAMMING</strong></h4>
<ul>
<li>Programming : communication with computer / solve problem</li>
</ul>
<p style="margin-left:40px">* 수업도 하나의 problem이라고 볼 수있다. 그 과정을 풀어나가는 것이 programming이 되는 것</p>
<ul>
<li>Two aspect of bioprogramming</li>
</ul>
<ol>
<li>Bioprogramming as the natural process of information propagation in the universe</li>
<li>Bioprogramming as programming technique in bioinformatics</li>
</ol>
<ul>
<li>IT programming / bioinformatics programming이 다른가?</li>
<li><strong>Bioinformatics : Life를 해킹하는것</strong></li>
<li>Type of amino acid[1]</li>
</ul>
<p style="margin-left:40px"><img alt="" src="/ckfinder/userfiles/images/20-types-of-amino-acids1.jpg" style="height:491px; width:468px" /></p>
<ul>
<li>circuit : species의 whole genome network를 알 수 있다.</li>
<li>
<p>Life에서 특정 molecule이 어떤 기능을 하는지 알아보는 방법은?</p>
</li>
</ul>
<p style="margin-left:40px">⇒ suppress or activate</p>
<p> </p>
<h4><strong>NETWORK BIOLOGY</strong></h4>
<ul>
<li>
<h4>My SQL?[2] (Structured Query Language)</h4>
</li>
</ul>
<p style="margin-left:40px">⇒ an open-source relational database management system (RDBMS).</p>
<ul>
<li>What is compiler?</li>
</ul>
<p style="margin-left:40px">⇒ translate 하려면 rule이 필요하다 </p>
<p style="margin-left:40px">⇒ compiler = rule<strong>(grammar)</strong></p>
<ul>
<li>Machine code → C → Basic → C<sup>++</sup> → <strong>perl </strong>(high level language)</li>
<li>Noam Chomsky</li>
</ul>
<p style="margin-left:40px">⇒ an American linguist, philosopher, cognitive scientist, historian, social critic, and political activist.[3]</p>
<p style="margin-left:40px">⇒ "Universal grammar" 언어는 모두 다르지만 모든 언어의 back bone은 같다</p>
<ul>
<li>understanding life that mean understanding inside grammar</li>
</ul>
<p style="margin-left:40px">Human have "human grammar"</p>
<p style="margin-left:40px"> </p>
<p style="margin-left:40px"> </p>
<p>[1] https://amit1b.wordpress.com/the-molecules-of-life/about/amino-acids/</p>
<p>[2] https://en.wikipedia.org/wiki/MySQL</p>
<p>[3] https://en.wikipedia.org/wiki/Noam_Chomsky</p>
<hr />
<p> </p>