Ilsun Yun/Homework2

From Biolecture.org

Noble Method of counting similarity of DNA sequence

 

SourceCode_perl

SourceCode_c++

 

Results(2d-array)

Sorted Result

Interpretation of the result

then count the diagonal line; because it means sequential.

This array means there is the longest length of duplicated contig is 12 nucleotides and 5 is one, 4 is one and 3 is 12 then etc.

So I can calculate the similarity by this result