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Created page with "<p>Sequencing Methods</p> <p>Alignment Methods</p> <p>My own code for Alignment by MATLAB</p> <p> </p> <p>References:</p> <p>F. SANGER, S. NICKLEN, AND..."
<p>[[Sequencing Methods]]</p>
<p>[[Alignment Methods]]</p>
<p>[[My own code for Alignment by MATLAB]]</p>
<p> </p>
<p>References:</p>
<p>F. SANGER, S. NICKLEN, AND A. R. COULSON. DNA sequencing with chain-terminating inhibitors. Medical Research Council Laboratory of Molecular Biology, Cambridge (1977)</p>
<p>Shawn E. Levy and Richard M. Myers <strong>- </strong>Advancements in Next-Generation Sequencing (2016)</p>
<p>Shyi.M.C., Chung.H.L., and Shi.J.C. <strong>Multiple DNA </strong>Sequence Alignment Based on Genetic Algorithms and Divide-and-Conquer Techniques<em>. International Journal of Applied Science and Engineering</em>. 3, 2: 89-100 (2005)</p>
<p>David W. Mount, Bioinformatics – Sequence and Genome Analysis, Cold Spring Harbor Laboratory Press</p>
<p><a href="https://www.youtube.com/watch?v=FvHRio1yyhQ">https://www.youtube.com/watch?v=FvHRio1yyhQ</a> - Sanger sequencing</p>
<p><a href="https://www.youtube.com/watch?v=uQq37JL618Q">https://www.youtube.com/watch?v=uQq37JL618Q</a> - Shotgun sequencing</p>
<p><a href="https://www.youtube.com/watch?v=fCd6B5HRaZ8&t=66s">https://www.youtube.com/watch?v=fCd6B5HRaZ8&t=66s</a> - illumina dye sequencing</p>
<p><a href="https://www.youtube.com/watch?v=GUb1TZvMWsw">https://www.youtube.com/watch?v=GUb1TZvMWsw</a> - Nanopore sequencing</p>
<p>[[Alignment Methods]]</p>
<p>[[My own code for Alignment by MATLAB]]</p>
<p> </p>
<p>References:</p>
<p>F. SANGER, S. NICKLEN, AND A. R. COULSON. DNA sequencing with chain-terminating inhibitors. Medical Research Council Laboratory of Molecular Biology, Cambridge (1977)</p>
<p>Shawn E. Levy and Richard M. Myers <strong>- </strong>Advancements in Next-Generation Sequencing (2016)</p>
<p>Shyi.M.C., Chung.H.L., and Shi.J.C. <strong>Multiple DNA </strong>Sequence Alignment Based on Genetic Algorithms and Divide-and-Conquer Techniques<em>. International Journal of Applied Science and Engineering</em>. 3, 2: 89-100 (2005)</p>
<p>David W. Mount, Bioinformatics – Sequence and Genome Analysis, Cold Spring Harbor Laboratory Press</p>
<p><a href="https://www.youtube.com/watch?v=FvHRio1yyhQ">https://www.youtube.com/watch?v=FvHRio1yyhQ</a> - Sanger sequencing</p>
<p><a href="https://www.youtube.com/watch?v=uQq37JL618Q">https://www.youtube.com/watch?v=uQq37JL618Q</a> - Shotgun sequencing</p>
<p><a href="https://www.youtube.com/watch?v=fCd6B5HRaZ8&t=66s">https://www.youtube.com/watch?v=fCd6B5HRaZ8&t=66s</a> - illumina dye sequencing</p>
<p><a href="https://www.youtube.com/watch?v=GUb1TZvMWsw">https://www.youtube.com/watch?v=GUb1TZvMWsw</a> - Nanopore sequencing</p>