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Perl Programming HW

66 bytes added, 03:10, 4 June 2018
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<p>[[Install and Learn BioPerl]]<br />
[[Make a Perl program translating &#39;all&#39; combinations of triple bases into amino acidsby MJ]]<br />[[Make a Perl program to calculate the lengths of DNA and protein sequencesby MJ]]<br />[[Make a Perl program to calculate the length of a Mycoplasma genitalium bacteriumby MJ]]<br />[[Pick 5 protein sequences and predict their secondary structures using available prediction programsby MJ]]<br />[[Open and re-write one FASTA file containing one protein sequence of TERTby MJ]]<br />[[Create a FASTA file with a sequence. Open it and reverse the sequence of it and print it out in another FASTA fileby MJ]]<br />[[Extract a sequence MKKTGIKG from ASMKATAHQMKKTGIKGMSTYALLRL and print it out in a fileby MJ]]<br />[[In a multi-sequence FASTA file, produce statistics such as sequence number, average seq length, GC content, AT content, etcby MJ]]<br />[[Align two protein sequences using a dynamic programming method in Perlby MJ]]<br />[[Randomly generate five 100 AA long protein sequences and store them in a FASTA fileby MJ]]<br />[[Create a flat text file database of protein sequences with hash function in Perlby MJ]]<br />
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