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17.05.26

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<p><span style="font-size:14px"><strong>Lecture 3 - Genomics</strong></span></p>
<p>* What is <u>Genomics</u>?<br />
&nbsp;&nbsp; &nbsp; &nbsp; - After assmbling genome of one species, we can use it as reference genome.<br />
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&nbsp;&nbsp;&nbsp;► MRCA : most recent common ancestor -&gt; we can predictsimilarity between different species.</p> <hr /><p>&nbsp;</p> <p>&nbsp;</p> <p>** Summary **</p> <p>(1) Genomics is changing the paradigm of biology.<br />(2) Geno-Pheno associated mutation is the key.<br />(3) Close species provide exact variants for pin-pointing mutation sites.<br />(4) Efficient reference to resequencing data comparison will be a useful bioinformatics methodology.<br /><br /><br />&nbsp;</p> <hr /><p><strong><span style="font-size:14px">Presentation 1. &quot;5<sup>th</sup> generation sequencing&quot;</span></strong></p> <p>► Design own model of sequencing.</p> <p>► Idea<br />&nbsp;&nbsp; &nbsp;(1) different H-bond of bases -&gt; nanosensor based on DNA helicase -&gt; sort AT, GC base pairing + measure change of current based on difference of size (pyrimidine vs. purine)<br />&nbsp;&nbsp; &nbsp;(2) detect decresing ATP, incresing ADP, and Pi.<br />&nbsp;&nbsp; &nbsp;(3) using dsDNA -&gt; break bond -&gt; sequencing</p>