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Jong Bhak papers

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'''When updating this page, please be sure that the addition is also made to the [http://kogic.kr/논문 Korean] and&nbsp;[http://kogic.net/Our_Publications English]&nbsp;versions of the KOGIC official website.'''<br/> <br/> &nbsp;
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! scope="col" | Year
! scope="col" | Title
! scope="col" | Publisher
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| &nbsp;
| [https://www.pnas.org/content/117/34/20662 The whale shark genome reveals how genomic and physiological properties scale with body size]
| PNAS
|-
| colspan="1" rowspan="4" | 2020
|
[https://advances.sciencemag.org/content/6/22/eaaz7835 Korean Genome Project: 1094 Korean personal genomes with clinical information]

| ScienceAdvances
|-
|
[https://academic.oup.com/gbe/article/12/5/553/5812782 The Origin and Composition of Korean Ethnicity Analyzed by Ancient and Present-Day Genome Sequences]

| Genome Biology and Evolution
|-
|
[https://pubmed.ncbi.nlm.nih.gov/32076829/ Decoding a Highly Mixed Kazakh Genome]

| Human Genetics
|-
|
[http://www.molcells.org/journal/view.html?doi=10.14348/molcells.2019.0190 Whole Genome Analysis of the Red-Crowned Crane Provides Insight into Avian Longevity]

| Molecules and Cells
|-
| &nbsp;
|
&nbsp;

| &nbsp;
|-
| colspan="1" rowspan="11" | 2019
|
[https://pubmed.ncbi.nlm.nih.gov/30811824/ Brca2 Abrogation Engages With the Alternative Lengthening of Telomeres via Break-Induced Replication]

| The FEBS Journal
|-
| title="https://pubmed.ncbi.nlm.nih.gov/31794015/" |
[https://pubmed.ncbi.nlm.nih.gov/31794015/ Chromosome-scale Assembly Comparison of the Korean Reference Genome KOREF From PromethION and PacBio With Hi-C Mapping Information]

| GigaScience
|-
|
[https://pubmed.ncbi.nlm.nih.gov/31810925/ Combinatory Analysis of Cell-free and Circulating Tumor Cell DNAs Provides More Variants for Cancer Treatment]

| Anticancer Research
|-
|
[https://pubmed.ncbi.nlm.nih.gov/30775972/ Comparison of Exercise Electrocardiography and Magnetocardiography for Detection of Coronary Artery Disease Using ST-segment Fluctuation Score]

| IOS Press
|-
|
[https://www.nature.com/articles/s41398-019-0595-2 Depression and Suicide Risk Prediction Models Using Blood-Derived Multi-Omics Data]

| Translational Psychiatry
|-
|
[https://pubmed.ncbi.nlm.nih.gov/30825304/ The Draft Genome of an Octocoral, Dendronephthya Gigantea]

| Genome Biology and Evolution
|-
|
[https://pubmed.ncbi.nlm.nih.gov/30811993/ The Galleria Mellonella Hologenome Supports Microbiota-Independent Metabolism of Long-Chain Hydrocarbon Beeswax]

| Cell Reports
|-
|
[https://pubmed.ncbi.nlm.nih.gov/30925871/ The Genome of the Giant Nomura's Jellyfish Sheds Light on the Early Evolution of Active Predation]

| BMC Biology
|-
| [https://pubmed.ncbi.nlm.nih.gov/30535859/ Investigation of Hanwoo-specific Structural Variations Using Whole-Genome Sequencing Data]
| Genes & Genomics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/31464627/" | [https://pubmed.ncbi.nlm.nih.gov/31464627/ Raptor Genomes Reveal Evolutionary Signatures of Predatory and Nocturnal Lifestyles]
| Genome Biology
|-
| title="https://pubmed.ncbi.nlm.nih.gov/31464627/" | [https://pubmed.ncbi.nlm.nih.gov/29432975/ Sequencing and Analysis of the Whole Genome of Indian Gujarati Male]
| Genomics
|-
| &nbsp;
|
&nbsp;

| &nbsp;
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| colspan="1" rowspan="6" | 2018
| title="https://pubmed.ncbi.nlm.nih.gov/31464627/" | [https://pubmed.ncbi.nlm.nih.gov/29644394/ Genomic Analysis Reveals Secondary Glioblastoma After Radiotherapy in a Subset of Recurrent Medulloblastomas]
| Acta Neuropathologica
|-
| title="https://pubmed.ncbi.nlm.nih.gov/31464627/" | [https://pubmed.ncbi.nlm.nih.gov/29383489/ Genomic Structure of the Native Inhabitants of Peninsular Malaysia and North Borneo Suggests Complex Human Population History in Southeast Asia]
| Human Genetics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/31464627/" | [https://pubmed.ncbi.nlm.nih.gov/30475813/ Grading System for Periodontitis by Analyzing Levels of Periodontal Pathogens in Saliva]
| PLoS One
|-
| title="https://pubmed.ncbi.nlm.nih.gov/31464627/" | [https://pubmed.ncbi.nlm.nih.gov/29618732/ KoVariome: Korean National Standard Reference Variome Database of Whole Genomes With Comprehensive SNV, Indel, CNV, and SV Analyses]
| Scientific Reports
|-
| title="https://pubmed.ncbi.nlm.nih.gov/31464627/" | [https://pubmed.ncbi.nlm.nih.gov/30320564/ Magnetocardiography Scoring System to Predict the Presence of Obstructive Coronary Artery Disease]
| Clinical Hemorheology and Microcirculation
|-
| title="https://pubmed.ncbi.nlm.nih.gov/31464627/" | [https://pubmed.ncbi.nlm.nih.gov/29775755/ Whole Genome Sequencing and Bioinformatics Analysis of Two Egyptian Genomes]
| Gene
|-
| &nbsp;
|
&nbsp;

| &nbsp;
|-
| colspan="1" rowspan="5" | 2017<br/> <br/> <br/> <br/> &nbsp;
| title="https://pubmed.ncbi.nlm.nih.gov/31464627/" | [https://pubmed.ncbi.nlm.nih.gov/28074842/ Analysis of the FGF Gene Family Provides Insights Into Aquatic Adaptation in Cetaceans]
| Scientific Reports
|-
| title="https://pubmed.ncbi.nlm.nih.gov/31464627/" | [https://pubmed.ncbi.nlm.nih.gov/28991236/ Corrigendum: An Ethnically Relevant Consensus Korean Reference Genome Is a Step Towards Personal Reference Genomes]
| Nature Communications
|-
| title="https://pubmed.ncbi.nlm.nih.gov/31464627/" | [https://pubmed.ncbi.nlm.nih.gov/28164156/ Genome-wide Data From Two Early Neolithic East Asian Individuals Dating to 7700 Years Ago]
| ScienceAdvances
|-
| title="https://pubmed.ncbi.nlm.nih.gov/31464627/" | [https://pubmed.ncbi.nlm.nih.gov/28678835/ Myotis Rufoniger Genome Sequence and Analyses: M. Rufoniger's Genomic Feature and the Decreasing Effective Population Size of Myotis Bats]
| PLoS One
|-
| title="https://pubmed.ncbi.nlm.nih.gov/31464627/" | [https://pubmed.ncbi.nlm.nih.gov/28042784/ Perspectives Provided by Leopard and Other Cat Genomes: How Diet Determined the Evolutionary History of Carnivores, Omnivores, and Herbivores]
| BMB Reports
|-
| &nbsp;
|
&nbsp;

| &nbsp;
|-
| colspan="1" rowspan="8" | 2016
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/27716407/ An Adaptive Detection Method for Fetal Chromosomal Aneuploidy Using Cell-Free DNA From 447 Korean Women]
| BMC Medical Genomics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/27802837/ Comparison of Carnivore, Omnivore, and Herbivore Mammalian Genomes With a New Leopard Assembly]
| Genome Biology
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/27129388/ Comparison of Two High-Throughput Semiconductor Chip Sequencing Platforms in Noninvasive Prenatal Testing for Down Syndrome in Early Pregnancy]
| BMC Medical Genomics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
[https://pubmed.ncbi.nlm.nih.gov/27882922/ An Ethnically Relevant Consensus Korean Reference Genome Is a Step Towards Personal Reference Genomes]

| Nature Communications
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | &nbsp;&nbsp;[https://pubmed.ncbi.nlm.nih.gov/27502179/ The Genetics of an Early Neolithic Pastoralist From the Zagros, Iran]
| Scientific Reports
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/28004835/ Genomes of Coral Dinoflagellate Symbionts Highlight Evolutionary Adaptations Conducive to a Symbiotic Lifestyle]
| Scientific Reports
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/27153548/ RNA-Seq Analysis Reveals New Evidence for Inflammation-Related Changes in Aged Kidney]
| Oncotarget
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/27561685/ Short-term Calorie Restriction Ameliorates Genomewide, Age-Related Alterations in DNA Methylation]
| Aging Cell
|-
| &nbsp;
|
&nbsp;

| &nbsp;
|-
| colspan="1" rowspan="11" | 2015
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/26449472/ Ancient Ethiopian Genome Reveals Extensive Eurasian Admixture Throughout the African Continent]
| Science
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://link.springer.com/article/10.1007/s13258-015-0353-7 Characterization of cetacean Numt and its application into cetacean phylogeny]
| Genes & Genomics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/26486310/ The First Whole Genome and Transcriptome of the Cinereous Vulture Reveals Adaptation in the Gastric and Immune Defense Systems and Possible Convergent Evolution Between the Old and New World Vultures]
| Genome Biology
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/25666347/ Genome-wide Analysis of DNA Methylation Before-And After Exercise in the Thoroughbred Horse With MeDIP-Seq]
| Molecules and Cells
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/26653294/ Genomic Legacy of the African Cheetah, Acinonyx Jubatus]
| Genome Biology
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/25637569/ HEpD: A Database Describing Epigenetic Differences Between Thoroughbred and Jeju Horses]
| Gene
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://link.springer.com/article/10.1007/s13258-014-0251-4 HExDB: a database for epigenetic changes occurring after horse exercise]
| Genes & Genomics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/25565328/ Insights Into the Evolution of Longevity From the Bowhead Whale Genome]
| Cell Reports
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/25983541/ Profiling Age-Related Epigenetic Markers of Stomach Adenocarcinoma in Young and Old Subjects]
| Cancer Informatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/25965825/ SLC15A2 Genomic Variation Is Associated With the Extraordinary Response of Sorafenib Treatment: Whole-Genome Analysis in Patients With Hepatocellular Carcinoma]
| Oncotarget
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/25887915/ Whole Genome Sequencing of an Ethnic Pathan (Pakhtun) From the North-West of Pakistan]
| BMC Genomics
|-
| &nbsp;
|
&nbsp;

| &nbsp;
|-
| colspan="1" rowspan="10" | 2014
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/25329639/ The Feasibility Study of Non-Invasive Fetal Trisomy 18 and 21 Detection With Semiconductor Sequencing Platform]
| PLoS One
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/25027854/ Genome-wide Analysis of DNA Methylation Patterns in Horse]
| BMC Genomics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/24690483/ Genomic Profile Analysis of Diffuse-Type Gastric Cancers]
| Genome Biology
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0093662 Identification and Characterization of MicroRNAs in Normal Equine Tissues by Next Generation Sequencing]
| PLoS One
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/24270359/ Minke Whale Genome and Aquatic Adaptation in Cetaceans]
| Nature Genetics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/25031567/ New Lung Cancer Panel for High-Throughput Targeted Resequencing]
| Genomics & Informatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/24276243/ PPP1R1B-STARD3 Chimeric Fusion Transcript in Human Gastric Cancer Promotes Tumorigenesis Through Activation of PI3K/AKT Signaling]
| Oncogene
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/24709692/ Whole-genome Analysis of a Patient With Early-Stage Small-Cell Lung Cancer]
| Pharmacogenomics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/23737375/ Comprehensive Genome- And Transcriptome-Wide Analyses of Mutations Associated With Microsatellite Instability in Korean Gastric Cancers]
| BMC Genomics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/25521865/" | [https://pubmed.ncbi.nlm.nih.gov/25521865/ Whole Genome Sequence and Analysis of the Marwari Horse Breed and Its Genetic Origin]
| BMC Genomics
|-
| &nbsp;
|
&nbsp;

| &nbsp;
|-
| colspan="1" rowspan="6" | 2013
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/23737375/ Comprehensive Genome- And Transcriptome-Wide Analyses of Mutations Associated With Microsatellite Instability in Korean Gastric Cancers]
| Genome Research
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/23707431/ The Genetic Basis of White Tigers]
| Current Biology
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/23742982/ iAnn: An Event Sharing Platform for the Life Sciences]
| Bioinformatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/23580538/ Peeling Back the Evolutionary Layers of Molecular Mechanisms Responsive to Exercise-Stress in the Skeletal Muscle of the Racing Horse]&nbsp;
| DNA Research
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/24045858/ The Tiger Genome and Comparative Analysis With Lion and Snow Leopard Genomes]
| Nature Communications
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://www.nature.com/articles/srep02998 Whole genome comparison of donor and cloned dogs]
| Scientific Reports
|-
| &nbsp;
|
&nbsp;

| &nbsp;
|-
| colspan="1" rowspan="6" | 2012
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/22580955/ De Novo Transcriptome Sequencing of Momordica Cochinchinensis to Identify Genes Involved in the Carotenoid Biosynthesis]
| Plant Molecular Biology
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://www.pnas.org/content/109/12/4574.short Genetic dating indicates that the Asian–Papuan admixture through Eastern Indonesia corresponds to the Austronesian expansion]
| PNAS
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/24627758/ Low Budget Analysis of Direct-To-Consumer Genomic Testing Familial Data]
| F1000Research
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/22139927/ MetaBase--the Wiki-Database of Biological Databases]
| Nucleic Acids Research
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/22797899/ A Public Resource Facilitating Clinical Use of Genomes]
| PNAS
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://bmcgenomics.biomedcentral.com/articles/10.1186/1471-2164-13-473 Whole transcriptome analyses of six thoroughbred horses before and after exercise using RNA-Seq]
| BMC Genomics
|-
| &nbsp;
|
&nbsp;

| &nbsp;
|-
| colspan="1" rowspan="7" | 2011
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/21696235/ BetaDock: Shape-Priority Docking Method Based on Beta-Complex]
| Journal of Biomolecular Structure and Dynamics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/21765942/ Gene Expression Pattern in Transmitochondrial Cytoplasmic Hybrid Cells Harboring Type 2 Diabetes-Associated Mitochondrial DNA Haplogroups]
| PLoS One
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/22242128/ Identification of Close Relatives in the HUGO Pan-Asian SNP Database]
| PLoS One
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/22369201/ Liverome: A Curated Database of Liver Cancer-Related Gene Signatures With Self-Contained Context Information]
| BMC Genomics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/21334307/ Mutational Hotspots in the Mitochondrial Genome of Lung Cancer]
| Biochemical and Biophysical Research Communications
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/21731755/ PanSNPdb: The Pan-Asian SNP Genotyping Database]
| PLoS One
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/21483678/ Population Genetic Structure of Peninsular Malaysia Malay Sub-Ethnic Groups]
| PLoS One
|-
| &nbsp;
|
&nbsp;

| &nbsp;
|-
| colspan="1" rowspan="12" | 2010
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19418260/ Alpha-glucosidase Folding During Urea Denaturation: Enzyme Kinetics and Computational Prediction]
| Applied Biochemistry and Biotechnology
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/20536287/ Differential Evolutionary Rates of Neuronal Transcriptome in Aplysia Kurodai and Aplysia Californica as a Tool for Gene Mining]
| Journal of Neurogenetics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19701810/ The Effect of Trifluoroethanol on Tyrosinase Activity and Conformation: Inhibition Kinetics and Computational Simulations]
| Applied Biochemistry and Biotechnology
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/20686617/ Gene Flow Between the Korean Peninsula and Its Neighboring Countries]
| PLoS One
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19277488/ Kinetics of Zn(2+)-induced Brain Type Creatine Kinase Unfolding and Aggregation]
| Applied Biochemistry and Biotechnology
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/20624717/ PDBWiki: Added Value Through Community Annotation of the Protein Data Bank]
| Database
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/20645659/ A Proposal for the Revision of Molecular Boundary Typology]
| Journal of Biomolecular Structure and Dynamics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/20875130/ Protein Network Prediction and Topological Analysis in Leishmania Major as a Tool for Drug Target Selection]
| BMC Bioinformatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/20129805/ Sphericity of a Protein via the Beta-Complex]
| Journal of Molecular Graphs and Modelling
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19082922/ Structural Analysis and Inhibitory Kinetics of Brain Type Creatine Kinase by Sodium Dodecyl Sulfate]
| Applied Biochemistry and Biotechnology
|-
| title="https://pubmed.ncbi.nlm.nih.gov/20004400/" | [https://pubmed.ncbi.nlm.nih.gov/20004400/ Systematic Cyanobacterial Membrane Proteome Analysis by Combining Acid Hydrolysis and Digestive Enzymes With Nano-Liquid chromatography-Fourier Transform Mass Spectrometry]
| Journal of Chromatography A
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/21131573/ Whole-genome Sequencing and Intensive Analysis of the Undomesticated Soybean (Glycine Soja Sieb. And Zucc.) Genome]
| PNAS
|-
| &nbsp;
|
&nbsp;

| &nbsp;
|-
| colspan="1" rowspan="17" | 2009
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19958506/ BioBarcode: a general DNA barcoding database and server platform for Asian biodiversity resources]
| BMC Genomics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19958500/ COMUS: Clinician-Oriented locus-specific MUtation detection and deposition System]
| BMC Genomics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19443183/ DNA microarray analyses and interactomic predictions for atopic dermatitis]
| Journal of Dermatological Science
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/18824329/ Dysregulated genes of extrinsic type of atopic dermatitis: 34K microarray and interactomic analyses]
| Journal of Dermatological Science
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19061912/ The effects of acrylamide on brain creatine kinase: inhibition kinetics and computational docking simulation]
| International Journal of Biological Macromolecules
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19470904/ The first Korean genome sequence and analysis: full genome sequencing for a socio-ethnic group]
| Genome Research
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19958513/ Gevab: a prototype genome variation analysis browsing server]
| BMC Bioinformatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19958510/ The Korean Bird Information System (KBIS) through open and public participation]
| BMC Bioinformatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/20007900/ Mapping human genetic diversity in Asia]
| Science
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19958484/ MitoInteractome: mitochondrial protein interactome database, and its application in 'aging network' analysis]
| BMC Genomics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19958475/ MitoVariome: a variome database of human mitochondrial DNA]
| BMC Genomics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | &nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;&nbsp;
[https://pubmed.ncbi.nlm.nih.gov/19958497/ PDbase: a database of Parkinson's disease-related genes and genetic variation using substantia nigra ESTs] &nbsp;

| BMC Genomics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | &nbsp;&nbsp;&nbsp;[https://pubmed.ncbi.nlm.nih.gov/19306394/ Planning the human variome project: the Spain report]
| Human Mutation
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19157793/ Profiling the dysregulated genes of keratinocytes in atopic dermatitis patients: cDNA microarray and interactomic analyses]
| Journal of Dermatological Science
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19958481/ PutidaNET: interactome database service and network analysis of Pseudomonas putida KT2440]
| BMC Genomics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19760752/ ssSNPTarget: genome-wide splice-site Single Nucleotide Polymorphism database]
| Human Mutation
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19721878/ Transcriptome and protein domain analyses in Aplysia nervous system with evolutionary implications]
| Communicative & Integrative Biology
|-
| &nbsp;
|
&nbsp;

| &nbsp;
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| colspan="1" rowspan="16" | 2008
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/18037613/ Automatic synchronization and distribution of biological databases and software over low-bandwidth networks among developing countrie]s
| Bioinformatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/18604500/ Cyanobacterial hybrid kinase Sll0043 regulates phototaxis by suppressing pilin and twitching motility protein]
| Journal of Microbiology
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/18808205/ The effect of histidine residue modification on tyrosinase activity and conformation: inhibition kinetics and computational prediction]
| Journal of Biomolecular Structure and Dynamics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://link.springer.com/article/10.1007/s12257-007-0183-9 Identification of gene-related Korean patents and construction of a database server for Korean patent sequences]
| Biotechnology and Bioprocess Engineering
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19091018/ An integrated database-pipeline system for studying single nucleotide polymorphisms and diseases]
| BMC Bioinformatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19091024/ An integrated Korean biodiversity and genetic information retrieval system]
| BMC Bioinformatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/18448467/ MassNet: a functional annotation service for protein mass spectrometry data]
| Nucleic Acids Research
|-
| title="http://www.koreascience.or.kr/article/JAKO200806135606418.page" | [http://www.koreascience.or.kr/article/JAKO200806135606418.page Personal Genomics, Bioinformatics, and Variomics]
| Genomics & Informatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/18023220/ Pocket extraction on proteins via the Voronoi diagram of spheres]
| Journal of Molecular Graphs and Modelling
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/18215330/ Predicting the interactome of Xanthomonas oryzae pathovar oryzae for target selection and DB service]
| BMC Bioinformatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/18948079/ Prediction and evaluation of protein-protein interaction in keratinocyte differentiation]
| Biochemical and Biophysical Research Communications
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/21136834/ Proteomic approaches to the analysis of atopic dermatitis and new insights from interactomics]
| Proteomics - Clinical Applications
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/18315851/ SNP@Promoter: a database of human SNPs (single nucleotide polymorphisms) within the putative promoter regions]
| BMC Bioinformatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [http://www.koreascience.or.kr/article/JAKO200831235453829.page Structural Bioinformatics Analysis of Disease-related Mutations]
| Genomics & Informatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/18315852/ SynechoNET: integrated protein-protein interaction database of a model cyanobacterium Synechocystis sp. PCC 6803]
| BMC Bioinformatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/19017802/ Transcriptome analysis and identification of regulators for long-term plasticity in Aplysia kurodai]
| PNAS
|-
| &nbsp;
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&nbsp;

| &nbsp;
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| colspan="1" rowspan="6" | 2007
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [http://www.koreascience.or.kr/article/JAKO200709906195530.page Biological Object Downloader (BOD) Service for Easy Download and Management of Biological Databases]
| Genetics & Informatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/17977885/ CONSORF: a consensus prediction system for prokaryotic coding sequences]
| Bioinformatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/17646709/ Genomic distribution of simple sequence repeats in Brassica rapa]
| Molecules and Cells
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/18305828/ GS2PATH: a web-based integrated analysis tool for finding functional relationships using gene ontology and biochemical pathway data]
| Bioinformation
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/17057246/ Impact of transcriptional properties on essentiality and evolutionary rate]
| Genetics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://link.springer.com/chapter/10.1007/978-3-540-74477-1_59 Multi-Resolution Protein Model]
| Lecture Notes in Computer Science
|-
| &nbsp;
|
&nbsp;

| &nbsp;
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| colspan="1" rowspan="6" | 2006
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [http://www.koreascience.or.kr/article/JAKO200634741684826.page BioCC: An Openfree Hypertext Bio Community Cluster for Biology]
| Genomics & Informatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/15979829/ Developmental rate and ploidy of embryos produced by nuclear transfer with different activation treatments in cattle]
| Animal Reproduction Science
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/16682823/ Functional annotation and analysis of Korean patented biological sequences using bioinformatics]
| Molecules and Cells
|-
| title="https://pubmed.ncbi.nlm.nih.gov/16845118/" | [https://pubmed.ncbi.nlm.nih.gov/16845118/ Localizome: a server for identifying transmembrane topologies and TM helices of eukaryotic proteins utilizing domain information]
| Nucleic Acids Research
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://link.springer.com/article/10.1631/jzus.2006.A1492 Parameter selection of pocket extraction algorithm using interaction interface]
| Journal of Zhejiang University - SCIENCE A
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/16632644/ Sequence-level analysis of the diploidization process in the triplicated FLOWERING LOCUS C region of Brassica rapa]
| Plant Cell
|-
| &nbsp;
|
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| &nbsp;
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| colspan="1" rowspan="8" | 2005
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/15613386/ Architecture of basic building blocks in protein and domain structural interaction networks]
| Bioinformatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://genominfo.org/journal/view.php?number=433 BioCovi: A Visualization Service for Comparative Genomics Analysis]
| Genomics & Informatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [http://www.koreascience.or.kr/article/JAKO200507921778146.page BioSubroutine: an Open Web Server for Bioinformatics Algorithms and Subroutines]
| Genomics & Informatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/15914543/ Comparative interactomics analysis of protein family interaction networks using PSIMAP (protein structural interactome map)]
| Bioinformatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://link.springer.com/article/10.1007/BF03167441 Euclidean Voronoi diagrams of 3D spheres and applications to protein structure analysis]
| Japan Journal of Industrial and Applied Mathematics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [http://www.koreascience.or.kr/article/JAKO200507921779715.page HExDB: Human EXon DataBase for Alternative Splicing Pattern Analysis]
| Genomics & Informatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/16122378/ A protein domain interaction interface database: InterPare]
| BMC Informatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/15749693/ PSIbase: a database of Protein Structural Interactome map (PSIMAP)]
| Bioinformatics
|-
| &nbsp;
|
&nbsp;

| &nbsp;
|-
| colspan="1" rowspan="6" | 2004
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/15610565/ The association of Alu repeats with the generation of potential AU-rich elements (ARE) at 3' untranslated regions]
| BMC Genomics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [http://www.koreascience.or.kr/article/JAKO200407921777370.page The Atom of Evolution]
| Genomics & Informatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [http://www.koreascience.or.kr/article/JAKO200407921776196.page High Correlation between Alu Elements and the Conversion of 3' UTR of mRNAs Processed Pseudogenes]
| Genomics & Informatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/15117749/ HPID: the Human Protein Interaction Database]
| Bioinformatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/14764552/ Large-scale co-evolution analysis of protein structural interlogues using the global protein structural interactome map (PSIMAP)]
| Bioinformatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://academic.oup.com/bioinformatics/article/20/10/1486/237030 Using convex hulls to extract interaction interfaces from known structures]
| Bioinformatics
|-
| &nbsp;
|
&nbsp;

| &nbsp;
|-
| colspan="1" rowspan="6" | 2003
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [http://www.koreascience.or.kr/article/JAKO200307921773980.page Biological Network Evolution Hypothesis Applied to Protein Structural Interactome]
| Genomics & Informatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [http://www.koreascience.or.kr/article/JAKO200307921773944.page Challenges and New Approaches in Genomics and Bioinformatics]
| Genomics & Informatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/12625531/ Different activation treatments for successful development of bovine oocytes following intracytoplasmic sperm injection]
| Zygote
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://link.springer.com/chapter/10.1007/3-540-36175-8_16 Predicting Protein Interactions in Human by Homologous Interactions in Yeast]
| Lecture Notes in Computer Science
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/14531933/ Visualisation and graph-theoretic analysis of a large-scale protein structural interactome]
| BMC Bioinformatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/12538268/ Visualization and analysis of protein interactions]
| Bioinformatics
|-
| &nbsp;
|
&nbsp;

| &nbsp;
|-
| colspan="1" rowspan="4" | 2002
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://link.springer.com/chapter/10.1007/3-540-36151-0_35 InterViewer: Dynamic Visualization of Protein-Protein Interactions]
| Lecture Notes in Computer Science
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/14571373/ Large scale statistical prediction of protein-protein interaction by potentially interacting domain (PID) pair]
| Genomic Informatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://www.jstage.jst.go.jp/article/gi1990/13/0/13_0_318/_article/-char/ja/ Protein Interactions in the Whole Human Genome]
| Genome Informatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://www.ncbi.nlm.nih.gov/pmc/articles/PMC139993/ Sequence similarity between stereocilin and otoancorin points to a unified mechanism for mechanotransduction in the mammalian inner ear]
| BMC Cell Biology
|-
| &nbsp;
|
&nbsp;

| &nbsp;
|-
| colspan="1" rowspan="7" | 2001
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/11791232/ Conservation of protein interaction network in evolution]
| Genome Informatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/11125048/ A fully automatic evolutionary classification of protein folds: Dali Domain Dictionary version 3]
| Nucleic Acids Research
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/11473004/ Generating protein interaction maps from incomplete data: application to fold assignment]
| Bioinformatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://www.jstage.jst.go.jp/article/gi1990/12/0/12_0_480/_article/-char/ja/ An Integrated Bioinformatic Search Server: Sequences, Structure, Interaction, and Function of Proteins (SSIF) Server]
| Genome Informatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/11273711/ Mapping protein family interactions: intramolecular and intermolecular protein family interaction repertoires in the PDB and yeast]
| Journal of Molecular Biology
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/11292848/ PartsList: a web-based system for dynamically ranking protein folds based on disparate attributes, including whole-genome expression and interaction information]
| Nucleic Acids Research
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://www.jstage.jst.go.jp/article/gi1990/12/0/12_0_350/_article/-char/ja/ Protein Classification Comparison Server]
| Genome Informatics
|-
| &nbsp;
|
&nbsp;

| &nbsp;
|-
| colspan="1" rowspan="5" | 2000
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/10980157/ DaliLite workbench for protein structure comparison]
| Bioinformatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/11159309/ Estimating the significance of sequence order in protein secondary structure and prediction]
| Bioinformatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/10842732/ Fast assignment of protein structures to sequences using the intermediate sequence library PDB-ISL]
| Bioinformatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/10871268/ RSDB: representative protein sequence databases have high information content]
| Bioinformatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/10842730/ Sequence search algorithm assessment and testing toolkit (SAT)]
| Bioinformatics
|-
| &nbsp;
|
&nbsp;

| &nbsp;
|-
| colspan="1" rowspan="3" | 1998
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/9545446/ DIVCLUS: an automatic method in the GEANFAMMER package that finds homologous domains in single- and multi-domain proteins]
| Bioinformatics
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://www.sciencedirect.com/science/article/pii/S0022283698922215#FN1 Sequence comparisons using multiple sequences detect three times as many remote homologues as pairwise methods]
| Journal of Molecular Biology
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | Structural assignments to the Mycoplasma genitalium proteins show extensive gene duplications and domain rearrangements
| PNAS
|-
| &nbsp;
|
&nbsp;

| &nbsp;
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| colspan="1" | 1997
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/9367767/ Intermediate sequences increase the detection of homology between sequences]
| Journal of Molecular Biology
|-
| &nbsp;
|
&nbsp;

| &nbsp;
|-
| colspan="1" rowspan="2" | 1996
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/8772377/ Protein structure prediction: playing the fold]
| Trends in Biochemical Sciences
|-
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/9079378/ Update on protein structure prediction: results of the 1995 IRBM workshop]
| Folding and Design
|-
| &nbsp;
|
&nbsp;

| &nbsp;
|-
| colspan="1" | 1995
| title="https://pubmed.ncbi.nlm.nih.gov/27716407/" | [https://pubmed.ncbi.nlm.nih.gov/8710832/ Fold recognition and ab initio structure predictions using hidden Markov models and beta-strand pair potentials]
| Proteins
|}
596
edits