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Homo sapiens PCNA

Revision as of 13:46, 26 May 2016 by imported>위민우
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)

>Perl Code of PCNA

 

[DNA sequence]

ATGTTCGAGGCGCGCCTGGTCCAGGGCTCCATCCTCAAGAAGGTGTTGGAGGCACTCAAGGACCTCATCAACGAGGCCTGCTGGGATATTAGCTCCAGCGGTGTAAACCTGCAGAGCATGGA

CTCGTCCCACGTCTCTTTGGTGCAGCTCACCCTGCGGTCTGAGGGCTTCGACACCTACCGCTGCGACCGCAACCTGGCCATGGGCGTGAACCTCACCAGTATGTCCAAAATACTAAAATGCGC

CGGCAATGAAGATATCATTACACTAAGGGCCGAAGATAACGCGGATACCTTGGCGCTAGTATTTGAAGCACCAAACCAGGAGAAAGTTTCAGACTATGAAATGAAGTTGATGGATTTAGATGTTG

AACAACTTGGAATTCCAGAACAGGAGTACAGCTGTGTAGTAAAGATGCCTTCTGGTGAATTTGCATGTATATGCCGAGATCTCAGCCATATTGGAGATGCTGTTGTAATTTCCTGTGCAAAAGAC

GGAGTGAAATTTTCTGCAAGTGGAGAACTTGGAAATGGAAACATTAAATTGTCACAGACAAGTAATGTCGATAAAGAGGAGGAAGCTGTTACCATAGAGATGAATGAACCAGTTCAACTAACTT

TTGCACTGAGGTACCTGAACTTCTTTACAAAAGCCACTCCACTCTCTTCAACGGTGACACTCAGTATGTCTGCAGATGTACCCCTTGTTGTAGAGTATAAAATTGCGGATATGGGACACTTAAAAT

ACTACTTGGCTCCCAAGATCGAGGATGAAGAAGGATCTTAG

 

[Amino acid sequence]

MFEARLVQGSILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDRNLAMGVNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDVEQLGIP

EQEYSCVVKMPSGEFACICRDLSHIGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVDKEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSSTVTLSMSADVPLVVEYKIADMGHLKYYLAPKIEDE

EGS

 

[Second structure]

http://www.compbio.dundee.ac.uk/jpred4/results/jp_yBpiZbd/jp_yBpiZbd.results.html

Simple result : (H=alpha helix E=beta sheet)

-EEEEE--HHHHHHHHHHHHHHH--EEEEE---EEEEEEE----EEEEEEEE--------E----EEEEE-HHHHHHHHH------EEEEEEE----EEEEEEEE----EEEEEE-------------------EEEEE--HHHHHHHHHH-----EEEEEE----EEEEEEE---EEEEEEE-----------EEE-----EEEEE-HHHHHHHHH------EEEEEE-----EEEEEE-----EEEEEEE---------

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H.W.1