Difference between revisions of "Bioprogramming Class"
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<p><span style="font-size: large">What is bioproramming?</span></p> | <p><span style="font-size: large">What is bioproramming?</span></p> | ||
| − | <p><span style="font-size: medium">Bioprogramming is all the programming activities for analyzing biological data.</span></p> | + | <p><span style="font-size: medium">Bioprogramming is all the [[programming]] activities for analyzing biological data.</span></p> |
<p> </p> | <p> </p> | ||
| − | <p><span style="font-size: medium">1. Find out by youself what is | + | <p><b><span style="font-size: medium">1. Find out by youself what programming is </span></b></p> |
<p><span style="font-size: medium"> -> Write an essay on what programming is.</span><span style="font-size: medium"><br /> | <p><span style="font-size: medium"> -> Write an essay on what programming is.</span><span style="font-size: medium"><br /> | ||
</span></p> | </span></p> | ||
| + | <p><span style="font-size: medium"> -> How to make a compiler?</span></p> | ||
| + | <p><span style="font-size: medium"> -> What is a language?</span></p> | ||
<p> </p> | <p> </p> | ||
| − | <p><span style="font-size: medium">2. [[Perl]] programming (http://bioperl.net)</span></p> | + | <p><b><span style="font-size: medium">2. [[Perl]] programming (http://bioperl.net)</span></b></p> |
<p><span style="font-size: medium"> [</span><font size="3">https://www.youtube.com/watch?v=JzIWdJVP-wo Larry Wall's google talk on Perl]</font></p> | <p><span style="font-size: medium"> [</span><font size="3">https://www.youtube.com/watch?v=JzIWdJVP-wo Larry Wall's google talk on Perl]</font></p> | ||
<p><span style="font-size: medium"> [</span><font size="3">https://www.youtube.com/watch?v=e2QVUK2e5aI Perl vs Python]</font></p> | <p><span style="font-size: medium"> [</span><font size="3">https://www.youtube.com/watch?v=e2QVUK2e5aI Perl vs Python]</font></p> | ||
<p><font size="3"> [https://www.youtube.com/watch?v=PRD5MRYdojU Perl in Linux]</font></p> | <p><font size="3"> [https://www.youtube.com/watch?v=PRD5MRYdojU Perl in Linux]</font></p> | ||
<p> </p> | <p> </p> | ||
| − | <p><span style="font-size: medium">3. [[Bioperl]] programming</span></p> | + | <p><b><span style="font-size: medium">3. [[Bioperl]] programming</span></b></p> |
<p><span style="font-size: medium"> [</span><font size="3">https://www.youtube.com/watch?v=7ycpEUQAnp4&list=PL69HcBwGqOfkH51kodSr-By70VN4JQlgd Perl for Healthcare talk]</font></p> | <p><span style="font-size: medium"> [</span><font size="3">https://www.youtube.com/watch?v=7ycpEUQAnp4&list=PL69HcBwGqOfkH51kodSr-By70VN4JQlgd Perl for Healthcare talk]</font></p> | ||
<p> </p> | <p> </p> | ||
| − | <p | + | <p><span style="font-size: medium"><b>4. BioOS [http://bioos.org/ BioOS.org]</b></span></p> |
<p> </p> | <p> </p> | ||
| − | <p><span style="font-size: medium">5. Languages for Bioinformatics</span></p> | + | <p><b><span style="font-size: medium">5. Languages for Bioinformatics</span></b></p> |
<p><font size="3"> [[R]], [[S language|S]], [[Matlab]]</font></p> | <p><font size="3"> [[R]], [[S language|S]], [[Matlab]]</font></p> | ||
<p><font size="3"><br /> | <p><font size="3"><br /> | ||
Revision as of 21:42, 5 May 2015
What is bioproramming?
Bioprogramming is all the programming activities for analyzing biological data.
1. Find out by youself what programming is
-> Write an essay on what programming is.
-> How to make a compiler?
-> What is a language?
2. Perl programming (http://bioperl.net)
[https://www.youtube.com/watch?v=JzIWdJVP-wo Larry Wall's google talk on Perl]
[https://www.youtube.com/watch?v=e2QVUK2e5aI Perl vs Python]
3. Bioperl programming
[https://www.youtube.com/watch?v=7ycpEUQAnp4&list=PL69HcBwGqOfkH51kodSr-By70VN4JQlgd Perl for Healthcare talk]
4. BioOS BioOS.org
5. Languages for Bioinformatics
6. Programming life
https://www.youtube.com/watch?v=r2OBznK6HkI C. elegans simulaation
https://www.youtube.com/watch?v=zjqLwPgLnV0
