Difference between revisions of "Homo sapiens Checkpoint kinase CHK1"
imported>위민우 |
imported>위민우 |
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| Line 49: | Line 49: | ||
<p>Simple result : (<span style="color:#FF0000">H</span>=alpha helix <span style="color:#DAA520">E</span>=beta sheet)</p> | <p>Simple result : (<span style="color:#FF0000">H</span>=alpha helix <span style="color:#DAA520">E</span>=beta sheet)</p> | ||
| − | < | + | <p><code>--------<span style="color:#DAA520">EEEEEEE</span>-----<span style="color:#DAA520">EEEEEEEE</span>----<span style="color:#DAA520">EEEEEEEEE</span>-----<span style="color:#FF0000">HHHHHHHHHHHHHHH</span>-----<span style="color:#DAA520">EEEEEEEEE</span>----<span style="color:#DAA520">EEEEEEE</span>-----<span style="color:#FF0000">HHHHHHH</span>-----<span style="color:#FF0000">HHHHHHHHHHHHHHHHHHH</span>----<span style="color:#DAA520">EEE</span>--------------<span style="color:#DAA520">EEEEE</span>--------------<span style="color:#DAA520">EEE</span>-----------<span style="color:#FF0000">HH</span>------------<span style="color:#FF0000">HHHHHHHHHHHH</span>----------<span style="color:#FF0000">HHHHHHHHHH</span>-------------<span style="color:#FF0000">HHHHHHHHHH</span>----------<span style="color:#FF0000">HHHHHH</span>----------------------------------------------------------------------------------------------------------------------------<span style="color:#FF0000">HHHHHHHHHHHHHH</span>----<span style="color:#DAA520">EEE</span>----<span style="color:#DAA520">EEEEEEE</span>-----<span style="color:#DAA520">EEEEEEEEEE</span>----<span style="color:#DAA520">EEEEEEE</span>-----<span style="color:#FF0000">HHHHHHHHHHHHH</span>----<span style="color:#DAA520">EE</span>---------</code></p> |
| − | <code>--------<span style="color:#DAA520">EEEEEEE</span>-----<span style="color:#DAA520">EEEEEEEE</span>----<span style="color:#DAA520">EEEEEEEEE</span>-----<span style="color:#FF0000">HHHHHHHHHHHHHHH</span>-----<span style="color:#DAA520">EEEEEEEEE</span>----<span style="color:#DAA520">EEEEEEE</span>-----<span style="color:#FF0000">HHHHHHH</span>-----<span style="color:#FF0000">HHHHHHHHHHHHHHHHHHH</span>----<span style="color:#DAA520">EEE</span>--------------<span style="color:#DAA520">EEEEE</span>--------------<span style="color:#DAA520">EEE</span>-----------<span style="color:#FF0000">HH</span>------------<span style="color:#FF0000">HHHHHHHHHHHH</span>----------<span style="color:#FF0000">HHHHHHHHHH</span>-------------<span style="color:#FF0000">HHHHHHHHHH</span>----------<span style="color:#FF0000">HHHHHH</span>----------------------------------------------------------------------------------------------------------------------------<span style="color:#FF0000">HHHHHHHHHHHHHH</span>----<span style="color:#DAA520">EEE</span>----<span style="color:#DAA520">EEEEEEE</span>-----<span style="color:#DAA520">EEEEEEEEEE</span>----<span style="color:#DAA520">EEEEEEE</span>-----<span style="color:#FF0000">HHHHHHHHHHHHH</span>----<span style="color:#DAA520">EE</span>---------</code></ | ||
<p>__________________________________________________________________________________________________________________________________________________________________________________________</p> | <p>__________________________________________________________________________________________________________________________________________________________________________________________</p> | ||
<p>[[H.W.1]]</p> | <p>[[H.W.1]]</p> | ||
Latest revision as of 15:03, 26 May 2016
>Perl Code of Checkpoint kinase CHK1
[DNA sequence]
ATGGCAGTGCCCTTTGTGGAAGACTGGGACTTGGTGCAAACCCTGGGAGAAGGTGCCTATGGAGAAGTTCAACTTGCTGTGAATAGAGTAACTGAAGAAGCAGTCGCAGTGAAGATTGTAGA
TATGAAGCGTGCCGTAGACTGTCCAGAAAATATTAAGAAAGAGATCTGTATCAATAAAATGCTAAATCATGAAAATGTAGTAAAATTCTATGGTCACAGGAGAGAAGGCAATATCCAATATTTATTT
CTGGAGTACTGTAGTGGAGGAGAGCTTTTTGACAGAATAGAGCCAGACATAGGCATGCCTGAACCAGATGCTCAGAGATTCTTCCATCAACTCATGGCAGGGGTGGTTTATCTGCATGGTATTG
GAATAACTCACAGGGATATTAAACCAGAAAATCTTCTGTTGGATGAAAGGGATAACCTCAAAATCTCAGACTTTGGCTTGGCAACAGTATTTCGGTATAATAATCGTGAGCGTTTGTTGAACAAGA
TGTGTGGTACTTTACCATATGTTGCTCCAGAACTTCTGAAGAGAAGAGAATTTCATGCAGAACCAGTTGATGTTTGGTCCTGTGGAATAGTACTTACTGCAATGCTCGCTGGAGAATTGCCATGG
GACCAACCCAGTGACAGCTGTCAGGAGTATTCTGACTGGAAAGAAAAAAAAACATACCTCAACCCTTGGAAAAAAATCGATTCTGCTCCTCTAGCTCTGCTGCATAAAATCTTAGTTGAGAATCC
ATCAGCAAGAATTACCATTCCAGACATCAAAAAAGATAGATGGTACAACAAACCCCTCAAGAAAGGGGCAAAAAGGCCCCGAGTCACTTCAGGTGGTGTGTCAGAGTCTCCCAGTGGATTTTCT
AAGCACATTCAATCCAATTTGGACTTCTCTCCAGTAAACAGTGCTTCTAGTGAAGAAAATGTGAAGTACTCCAGTTCTCAGCCAGAACCCCGCACAGGTCTTTCCTTATGGGATACCAGCCCCTC
ATACATTGATAAATTGGTACAAGGGATCAGCTTTTCCCAGCCCACATGTCCTGATCATATGCTTTTGAATAGTCAGTTACTTGGCACCCCAGGATCCTCACAGAACCCCTGGCAGCGGTTGGTCA
AAAGAATGACACGATTCTTTACCAAATTGGATGCAGACAAATCTTATCAATGCCTGAAAGAGACTTGTGAGAAGTTGGGCTATCAATGGAAGAAAAGTTGTATGAATCAGGTTACTATATCAACAA
CTGATAGGAGAAACAATAAACTCATTTTCAAAGTGAATTTGTTAGAAATGGATGATAAAATATTGGTTGACTTCCGGCTTTCTAAGGGTGATGGATTGGAGTTCAAGAGACACTTCCTGAAGATTA
AAGGGAAGCTGATTGATATTGTGAGCAGCCAGAAGGTTTGGCTTCCTGCCACATGA
[Amino acid sequence]
MAVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH
RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPD
IKKDRWYNKPLKKGAKRPRVTSGGVSESPSGFSKHIQSNLDFSPVNSASSEENVKYSSSQPEPRTGLSLWDTSPSYIDKLVQGISFSQPTCPDHMLLNSQLLGTPGSSQNPWQRLVKRMTRFFTKL
DADKSYQCLKETCEKLGYQWKKSCMNQVTISTTDRRNNKLIFKVNLLEMDDKILVDFRLSKGDGLEFKRHFLKIKGKLIDIVSSQKVWLPAT
[Second structure]
http://www.compbio.dundee.ac.uk/jpred4/results/jp_gLEX9iq/jp_gLEX9iq.results.html
Simple result : (H=alpha helix E=beta sheet)
--------EEEEEEE-----EEEEEEEE----EEEEEEEEE-----HHHHHHHHHHHHHHH-----EEEEEEEEE----EEEEEEE-----HHHHHHH-----HHHHHHHHHHHHHHHHHHH----EEE--------------EEEEE--------------EEE-----------HH------------HHHHHHHHHHHH----------HHHHHHHHHH-------------HHHHHHHHHH----------HHHHHH----------------------------------------------------------------------------------------------------------------------------HHHHHHHHHHHHHH----EEE----EEEEEEE-----EEEEEEEEEE----EEEEEEE-----HHHHHHHHHHHHH----EE---------
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