Difference between revisions of "Seongjun Hong"
From Biolecture.org
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<h1><span style="font-size: x-large"><strong><b><span lang="EN-US">Bioinformatics</span></b></strong></span></h1> | <h1><span style="font-size: x-large"><strong><b><span lang="EN-US">Bioinformatics</span></b></strong></span></h1> | ||
<p style="font-family: -apple-system-font; line-height: 16px"><span style="font-size: larger"><span lang="EN-US"><font size="4">In bioinformatics, all biological data are regarded as information. By combining various fields such as computer science and statistics, the information is analyzed and studied. </font></span></span></p> | <p style="font-family: -apple-system-font; line-height: 16px"><span style="font-size: larger"><span lang="EN-US"><font size="4">In bioinformatics, all biological data are regarded as information. By combining various fields such as computer science and statistics, the information is analyzed and studied. </font></span></span></p> | ||
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<h1><span style="font-size: x-large"><strong><span lang="EN-US">Bioprogramming</span></strong></span></h1> | <h1><span style="font-size: x-large"><strong><span lang="EN-US">Bioprogramming</span></strong></span></h1> | ||
<p style="font-family: -apple-system-font; line-height: 16px"> </p> | <p style="font-family: -apple-system-font; line-height: 16px"> </p> | ||
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<p style="font-family: -apple-system-font; line-height: 16px"><font size="4"><b><span style="font-size: larger"><span lang="EN-US">Bioprogramming </span></span></b><span style="font-size: larger"><span lang="EN-US">is all programming</span><span lang="EN-US"> activities for analyzing biological data.</span></span></font></p> | <p style="font-family: -apple-system-font; line-height: 16px"><font size="4"><b><span style="font-size: larger"><span lang="EN-US">Bioprogramming </span></span></b><span style="font-size: larger"><span lang="EN-US">is all programming</span><span lang="EN-US"> activities for analyzing biological data.</span></span></font></p> | ||
<p style="font-family: -apple-system-font; line-height: 16px"><b><span lang="EN-US"> </span></b></p> | <p style="font-family: -apple-system-font; line-height: 16px"><b><span lang="EN-US"> </span></b></p> | ||
<h2><span style="font-size: larger"><strong><b><span lang="EN-US">Programming</span></b></strong></span></h2> | <h2><span style="font-size: larger"><strong><b><span lang="EN-US">Programming</span></b></strong></span></h2> | ||
| − | <p style="font-family: -apple-system-font; line-height: 16px" | + | <p style="font-family: -apple-system-font; line-height: 16px"><span style="font-size: medium"><b><span lang="EN-US">Programming </span></b><span lang="EN-US">is a process that makes new algorithm from programming languages called codes through a compiler. It can convert a set of programming languages into executable programs. Programs can perform various activities like computation, analysis, algorithmic flow, and more. </span></span></p> |
| − | <p style="font-family: -apple-system-font; line-height: 16px"><span style="font-size: | + | <p style="font-family: -apple-system-font; line-height: 16px"><span style="font-size: medium"><span lang="EN-US">The <b>computer </b>is the electrical machine or device that carries out the programs. Computers exist in many different forms such as desktop, laptop, tablet, and etc. <br /> |
| − | + | </span></span></p> | |
| − | <p style="font-family: -apple-system-font; line-height: 16px"><b><span lang="EN-US"> </span></b></p> | + | <p style="font-family: -apple-system-font; line-height: 16px"><span style="font-size: medium"><b><span lang="EN-US"> </span></b></span></p> |
| − | <h3 style="margin-left: 40px"><span style="font-size: | + | <h3 style="margin-left: 40px"><span style="font-size: medium"><strong><b><span lang="EN-US">Compiler</span></b></strong></span></h3> |
| − | <p style="font-family: -apple-system-font; margin-left: 40px; line-height: 16px" | + | <p style="font-family: -apple-system-font; margin-left: 40px; line-height: 16px"><span style="font-size: medium"><b><span lang="EN-US">Compiler </span></b><span lang="EN-US">is a program that transforms programming languages into computer languages. With this process, computer can recognize the commands. The compilers have own specific programming language. C<sup>++</sup>, for example, has c language. They are classified according to the languages and the operating systems.</span></span></p> |
| − | <p style="font-family: -apple-system-font; line-height: 16px"> </p> | + | <p style="font-family: -apple-system-font; line-height: 16px"><span style="font-size: medium"> </span></p> |
| − | <h3 style="margin-left: 40px"><span style="font-size: | + | <h3 style="margin-left: 40px"><span style="font-size: medium"><strong><b><span lang="EN-US">Programming language</span></b></strong></span></h3> |
| − | <p style="font-family: -apple-system-font; margin-left: 40px; line-height: 16px" | + | <p style="font-family: -apple-system-font; margin-left: 40px; line-height: 16px"><span style="font-size: medium"><b><span lang="EN-US">Programming languages </span></b><span lang="EN-US">are generally high-level languages that are used in coding by programmers.If you compare the programming to a country, then the language is the communication medium. The 3 major types of bioprogramming languages are S, R, and Matlab. All of them are for statistical and computational use. <b>Grammar </b>is the rule of the languages.<br /> |
| − | + | </span></span></p> | |
| − | <p style="font-family: -apple-system-font; line-height: 16px"> </p> | + | <p style="font-family: -apple-system-font; line-height: 16px"><span style="font-size: medium"> </span></p> |
| − | <h2><span style="font-size: | + | <h2><span style="font-size: medium"><strong>Perl programming</strong></span></h2> |
| − | <p | + | <p><span style="font-size: medium">Perl is a programming language that supports scripts called a script lanuguage. It is developed by Larry wall in 1987. It is a powerful tool for varied applications such as network programming, finance, and bioinformatics. An operating system of perl is basically Linux but almost systems support the program. </span></p> |
| − | < | + | <p><span style="font-size: medium"><a href="http://perl.org">site(perl.org)</a></span></p> |
| + | <h3 style="margin-left: 40px"> </h3> | ||
| + | <p style="margin-left: 40px"><span style="font-size: medium">BioPerl is a collection of Perl modules for biological data processing. It is an open source software for biological applications in bioinformatics. In the Human Genome Project, the program has played a central role.</span></p> | ||
| + | <p style="margin-left: 40px"><span style="font-size: medium"><a href="http://bioperl.org">site(bioperl.org)</a></span></p> | ||
| + | <h2> </h2> | ||
| + | <p><span style="font-size: medium">BioOS denotes an operationg system for bioinformatics</span></p> | ||
| + | <p><span style="font-size: medium"><a href="http://bioos.org">site(bioos.org) </a></span></p> | ||
| + | <h2> </h2> | ||
| + | <ul> | ||
| + | <li><span style="font-size: medium"><a href="http://en.wikipedia.org/wiki/R_(programming_language)">R</a></span> <span style="font-size: medium"> </span></li> | ||
| + | <li><span style="font-size: small"><a href="http://en.wikipedia.org/wiki/S_(programming_language)"><span style="font-size: medium">S</span></a></span><span style="font-size: medium"> </span></li> | ||
| + | <li><span style="font-size: medium"><a href="http://en.wikipedia.org/wiki/MATLAB">Matlab</a></span><span style="font-size: medium"> </span><span style="font-size: medium"> </span> | ||
| + | <p> </p> | ||
| + | </li> | ||
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| + | <p style="margin-left: 40px"> </p> | ||
| + | </span><span style="font-size: larger"> | ||
| + | <p> </p> | ||
| + | </span></p> | ||
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<p style="margin-left: 40px"> </p> | <p style="margin-left: 40px"> </p> | ||
| − | <h2><strong | + | <h2><strong>BioOS</strong></h2> |
| − | < | + | </span><span style="font-size: medium"> |
| − | < | + | <p> </p> |
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| + | <h2><strong>Other languages for Bioinformatics</strong></h2> | ||
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| − | </ | + | <p> </p> |
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| + | <p><b><em>My definition of Bioprogramming</em></b> is to synthesize new DNA strands with the aim of controlling a particular life function and of utilizing that function.</p> | ||
| + | </p> | ||
| + | <h3 style="margin-left: 40px"><strong>BioPerl programming</strong></h3> | ||
Revision as of 17:35, 12 May 2015
Contents
Bioinformatics
In bioinformatics, all biological data are regarded as information. By combining various fields such as computer science and statistics, the information is analyzed and studied.
It is an interdisciplinary field that develops methods and software tools for understanding biological data.
Bioprogramming
Bioprogramming is all programming activities for analyzing biological data.
Programming
Programming is a process that makes new algorithm from programming languages called codes through a compiler. It can convert a set of programming languages into executable programs. Programs can perform various activities like computation, analysis, algorithmic flow, and more.
The computer is the electrical machine or device that carries out the programs. Computers exist in many different forms such as desktop, laptop, tablet, and etc.
Compiler
Compiler is a program that transforms programming languages into computer languages. With this process, computer can recognize the commands. The compilers have own specific programming language. C++, for example, has c language. They are classified according to the languages and the operating systems.
Programming language
Programming languages are generally high-level languages that are used in coding by programmers.If you compare the programming to a country, then the language is the communication medium. The 3 major types of bioprogramming languages are S, R, and Matlab. All of them are for statistical and computational use. Grammar is the rule of the languages.
Perl programming
Perl is a programming language that supports scripts called a script lanuguage. It is developed by Larry wall in 1987. It is a powerful tool for varied applications such as network programming, finance, and bioinformatics. An operating system of perl is basically Linux but almost systems support the program.
BioPerl is a collection of Perl modules for biological data processing. It is an open source software for biological applications in bioinformatics. In the Human Genome Project, the program has played a central role.
BioOS denotes an operationg system for bioinformatics
BioOS
Other languages for Bioinformatics
My definition of Bioprogramming is to synthesize new DNA strands with the aim of controlling a particular life function and of utilizing that function.
