View source for UNIST Bioinformatics course syllabus

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			<div style="text-align: center; line-height: 160%; word-break: keep-all"><strong><span style="color:black; font-size:14pt">Syllabus 2019</span></strong></div>
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			<div style="line-height: 160%; word-break: keep-all"><strong><span style="color:black">Course Information&nbsp; Bioinformatics</span></strong></div>
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			<p><strong><span style="color:black">Instructor Information [[Dugwoo Nam]] &amp; [[Jong Bhak]]</span></strong></p>
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			<div style="text-align: center; line-height: 160%; word-break: keep-all"><span style="font-size:8.5pt">BIO43101</span></div>
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			<div style="text-align: center; line-height: 160%; word-break: keep-all"><span style="color:black; font-size:9pt">Instructor</span></div>
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			<div style="text-align: center; line-height: 160%; word-break: keep-all"><span style="color:black; font-size:9pt">[[Jong Bhak]]</span></div>
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			<p style="text-align: center"><span style="color:black; font-size:9pt">Course Title</span></p>
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			<div style="text-align: center; line-height: 160%; word-break: keep-all"><span style="color:black; font-size:9pt">Bioinformatics</span></div>
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			<div style="text-align: center; line-height: 160%; word-break: keep-all"><span style="color:black; font-size:9pt">Office</span></div>
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			<p><span style="color:black; font-size:9pt">&nbsp;Room 301-8, Bldg 110</span></p>
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			<div style="text-align: center; line-height: 160%; word-break: keep-all"><span style="color:black; font-size:9pt">2019/1st</span></div>
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			<div style="text-align: center; line-height: 160%; word-break: keep-all"><span style="color:black; font-size:9pt">Telephone</span></div>
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			<div style="text-align: center; line-height: 160%; word-break: keep-all"><span style="color:black; font-size:9pt">010 4644 6754 (JB)</span></div>
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			<div style="text-align: center; line-height: 160%; word-break: keep-all"><span style="color:black; font-size:9pt">SLS</span></div>
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			<div style="text-align: center; line-height: 160%; word-break: keep-all"><span style="color:black; font-size:9pt">E-mail</span></div>
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			<div style="text-align: center; line-height: 160%; word-break: keep-all"><span style="color:black; font-size:9pt"><a href="mailto:jongbhak@gmail.com">jongbhak@gmail.com</a> (JB)</span></div>
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			<p style="text-align: center"><span style="color:black; font-size:9pt">Office Hours</span></p>
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			<div style="text-align: center; line-height: 160%; word-break: keep-all"><span style="color:black; font-size:9pt">FRI 13:00-15:30 (NSB S205)</span></div>
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			<p style="text-align: center"><span style="color:black; font-size:9pt">Grading Type</span></p>
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			<p>Bioinformatics course contains introductory information in how to process biological data using computers.</p>

			<p>During the class, students will learn the concepts by short lectures and hands-on experiences. So, please bring a laptop computer to the class from the second week.</p>

			<div style="line-height: 160%; word-break: keep-all">&nbsp;</div>

			<p>The second part of the course taught by Jong Bhak will focus on:</p>

			<p>1)&nbsp;&nbsp;&nbsp;&nbsp; What Bioinformatics is</p>

			<p>2)&nbsp;&nbsp;&nbsp;&nbsp; How to independently read research papers</p>

			<p>3)&nbsp;&nbsp;&nbsp;&nbsp; How to critically analyze research papers and topics</p>

			<p>4)&nbsp;&nbsp;&nbsp;&nbsp; How to choose a research topic in bioinformatics and design an experiment and perform research</p>

			<p>5)&nbsp;&nbsp;&nbsp;&nbsp; How to write research report(paper) to make the results known to the public.</p>

			<p>6)&nbsp;&nbsp;&nbsp;&nbsp; The course will be done through active action-oriented learning method(AAO)</p>

			<p>7)&nbsp;&nbsp;&nbsp;&nbsp; Students are required to motivate themselves and bring their research topics after reading research papers.</p>
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			<td colspan="7" style="background-color: transparent; width: 505.5pt; height: 55.85pt"><font color="#ff0000">Science paper writing on bioinformatics topics.</font></td>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:black">&nbsp;</span></div>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:black">&nbsp;</span></div>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:black">&nbsp;</span></div>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:black">&nbsp;</span></div>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:black">&nbsp;</span></div>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:black">&nbsp;</span></div>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:black">Text</span></div>
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			<p><span style="color:red">Book and PPT files, on-line links</span></p>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:black">Title</span></div>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:red">Bioinformatics</span></div>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:black">&nbsp;</span></div>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:black">Author</span></div>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:red">Jong Bhak</span></div>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:black">ISBN</span></div>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:black">Remarks</span></div>
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			<p><span style="color:black">Course Reserves Designation</span></p>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:black">References</span></div>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:black">Category</span></div>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:red">Book, on-line links</span></div>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:red">Bioinformatics</span></div>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:black">&nbsp;</span></div>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:black">&nbsp;</span></div>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:black">Author</span></div>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:red">Jong Bhak</span></div>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:black">&nbsp;</span></div>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:black">ISBN</span></div>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:black">&nbsp;</span></div>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:black">Remarks</span></div>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:black">&nbsp;</span></div>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:black">&nbsp;</span></div>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:black">&nbsp;</span></div>
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			<p><span style="color:black">Course Reserves Designation</span></p>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:black">&nbsp;</span></div>
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			<div style="line-height: 160%; word-break: keep-all"><span style="color:black">&nbsp;</span></div>
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<div style="line-height: 160%; word-break: keep-all"><span style="color:black; font-size:12pt">Weekly Schedule</span></div>

<p>&nbsp;</p>

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			<div style="text-align: center; line-height: 160%; word-break: keep-all"><span style="color:black">Contents</span></div>
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			<div style="text-align: center; word-break: keep-all"><span style="color:black">01</span></div>
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			<td style="background-color: transparent; width: 462pt; height: 35.65pt">
			<p style="text-align: left">Introduction to Bioinformatics, Introduction to Microarray, RNA-seq</p>
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			<div style="text-align: center; word-break: keep-all"><span style="color:black">02</span></div>
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			<td style="background-color: transparent; width: 462pt; height: 35.65pt">
			<p>Microarray &amp; gene data analysis I: Normalization, Identification of DEGs (R language), Gene list analysis with DAVID and STRING(web)</p>
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			<div style="text-align: center; word-break: keep-all"><span style="color:black">03</span></div>
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			<td style="background-color: transparent; width: 462pt; height: 35.65pt">
			<p>Microarray &amp; gene data analysis II: Clustering, (R, cluster, treeview), Dimension Reduction (PCA), survival analysis</p>
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			<div style="text-align: center; word-break: keep-all"><span style="color:black">04</span></div>
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			<td style="background-color: transparent; width: 462pt; height: 35.65pt">
			<div style="line-height: 115%">Test 1</div>
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			<div style="text-align: center; word-break: keep-all"><span style="color:black">05</span></div>
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			<td style="background-color: transparent; width: 462pt; height: 35.65pt">
			<p style="text-align: left">Gene-set and pathway analysis with GSEA, Introduction to classification analysis (SVM)</p>
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			<div style="text-align: center; word-break: keep-all"><span style="color:black">06</span></div>
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			<div style="line-height: 115%">RNA-seq, ChIP-seq data analysis</div>
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			<div style="text-align: center; word-break: keep-all"><span style="color:black">07</span></div>
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			<td style="background-color: transparent; width: 462pt; height: 35.65pt">
			<p style="text-align: left">Introduction to NCBI databases: data and literature search</p>
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			<td style="background-color: transparent; width: 42.75pt; height: 35.65pt">
			<div style="text-align: center; word-break: keep-all"><span style="color:black">08</span></div>
			</td>
			<td style="background-color: transparent; width: 462pt; height: 35.65pt">
			<div style="text-align: left; word-break: keep-all"><span style="color:black">Test 2</span></div>
			</td>
		</tr>
		<tr>
			<td style="background-color: transparent; width: 42.75pt; height: 35.65pt">
			<div style="text-align: center; word-break: keep-all"><span style="color:black">09</span></div>
			</td>
			<td style="background-color: transparent; width: 462pt; height: 35.65pt">
			<div style="text-align: left; word-break: keep-all"><span style="color:black">&nbsp;[[Principles of Bioinformatics]]</span></div>
			</td>
		</tr>
		<tr>
			<td style="background-color: transparent; width: 42.75pt; height: 35.65pt">
			<div style="text-align: center; word-break: keep-all"><span style="color:black">10</span></div>
			</td>
			<td style="background-color: transparent; width: 462pt; height: 35.65pt">
			<div style="text-align: left; word-break: keep-all"><span style="color:black">&nbsp;[[Bioprogramming]]</span></div>
			</td>
		</tr>
		<tr>
			<td style="background-color: transparent; width: 42.75pt; height: 35.65pt">
			<div style="text-align: center; word-break: keep-all"><span style="color:black">11</span></div>
			</td>
			<td style="background-color: transparent; width: 462pt; height: 35.65pt">
			<div style="text-align: left; word-break: keep-all"><span style="color:black">&nbsp;[[Genomics]]</span></div>
			</td>
		</tr>
		<tr>
			<td style="background-color: transparent; width: 42.75pt; height: 35.65pt">
			<div style="text-align: center; word-break: keep-all"><span style="color:black">12</span></div>
			</td>
			<td style="background-color: transparent; width: 462pt; height: 35.65pt">
			<div style="text-align: left; word-break: keep-all"><span style="color:black">&nbsp;[[Transcriptomics]]</span></div>
			</td>
		</tr>
		<tr>
			<td style="background-color: transparent; width: 42.75pt; height: 35.65pt">
			<div style="text-align: center; word-break: keep-all"><span style="color:black">13</span></div>
			</td>
			<td style="background-color: transparent; width: 462pt; height: 35.65pt">
			<div style="text-align: left; word-break: keep-all"><span style="color:black">&nbsp;[[Proteomics]]</span></div>
			</td>
		</tr>
		<tr>
			<td style="background-color: transparent; width: 42.75pt; height: 35.65pt">
			<div style="text-align: center; word-break: keep-all"><span style="color:black">14</span></div>
			</td>
			<td style="background-color: transparent; width: 462pt; height: 35.65pt">
			<div style="text-align: left; word-break: keep-all"><span style="color:black">&nbsp;[[Epigenomics]]</span></div>
			</td>
		</tr>
		<tr>
			<td style="background-color: transparent; width: 42.75pt; height: 35.65pt">
			<div style="text-align: center; word-break: keep-all"><span style="color:black">15</span></div>
			</td>
			<td style="background-color: transparent; width: 462pt; height: 35.65pt">
			<div style="text-align: left; word-break: keep-all"><span style="color:black">&nbsp;[[Canceromics and Geromics]]</span></div>
			</td>
		</tr>
	</tbody>
</table>

<div>&nbsp;</div>

<hr />
<p>[[UNIST Bioinformatics course]]&nbsp; [http://bioinformatics.ws Bioinformatics.ws]</p>

<p>&nbsp;</p>

<p>&nbsp;</p>