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Created page with "<p>>Perl Code of Checkpoint kinase CHK1</p> <p> </p> <p>[DNA sequence]</p> <p><span style="font-family:arial,helvetica,sans-serif">ATGGCAGTGCCCTTTGTGGAAGACTGGGACTT..."
<p>>[[Perl Code of Checkpoint kinase CHK1]]</p>
<p> </p>
<p>[DNA sequence]</p>
<p><span style="font-family:arial,helvetica,sans-serif">ATGGCAGTGCCCTTTGTGGAAGACTGGGACTTGGTGCAAACCCTGGGAGAAGGTGCCTATGGAGAAGTTCAACTTGCTGTGAATAGAGTAACTGAAGAAGCAGTCGCAGTGAAGATTGTAGA</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">TATGAAGCGTGCCGTAGACTGTCCAGAAAATATTAAGAAAGAGATCTGTATCAATAAAATGCTAAATCATGAAAATGTAGTAAAATTCTATGGTCACAGGAGAGAAGGCAATATCCAATATTTATTT</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">CTGGAGTACTGTAGTGGAGGAGAGCTTTTTGACAGAATAGAGCCAGACATAGGCATGCCTGAACCAGATGCTCAGAGATTCTTCCATCAACTCATGGCAGGGGTGGTTTATCTGCATGGTATTG</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">GAATAACTCACAGGGATATTAAACCAGAAAATCTTCTGTTGGATGAAAGGGATAACCTCAAAATCTCAGACTTTGGCTTGGCAACAGTATTTCGGTATAATAATCGTGAGCGTTTGTTGAACAAGA</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">TGTGTGGTACTTTACCATATGTTGCTCCAGAACTTCTGAAGAGAAGAGAATTTCATGCAGAACCAGTTGATGTTTGGTCCTGTGGAATAGTACTTACTGCAATGCTCGCTGGAGAATTGCCATGG</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">GACCAACCCAGTGACAGCTGTCAGGAGTATTCTGACTGGAAAGAAAAAAAAACATACCTCAACCCTTGGAAAAAAATCGATTCTGCTCCTCTAGCTCTGCTGCATAAAATCTTAGTTGAGAATCC</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">ATCAGCAAGAATTACCATTCCAGACATCAAAAAAGATAGATGGTACAACAAACCCCTCAAGAAAGGGGCAAAAAGGCCCCGAGTCACTTCAGGTGGTGTGTCAGAGTCTCCCAGTGGATTTTCT</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">AAGCACATTCAATCCAATTTGGACTTCTCTCCAGTAAACAGTGCTTCTAGTGAAGAAAATGTGAAGTACTCCAGTTCTCAGCCAGAACCCCGCACAGGTCTTTCCTTATGGGATACCAGCCCCTC</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">ATACATTGATAAATTGGTACAAGGGATCAGCTTTTCCCAGCCCACATGTCCTGATCATATGCTTTTGAATAGTCAGTTACTTGGCACCCCAGGATCCTCACAGAACCCCTGGCAGCGGTTGGTCA</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">AAAGAATGACACGATTCTTTACCAAATTGGATGCAGACAAATCTTATCAATGCCTGAAAGAGACTTGTGAGAAGTTGGGCTATCAATGGAAGAAAAGTTGTATGAATCAGGTTACTATATCAACAA</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">CTGATAGGAGAAACAATAAACTCATTTTCAAAGTGAATTTGTTAGAAATGGATGATAAAATATTGGTTGACTTCCGGCTTTCTAAGGGTGATGGATTGGAGTTCAAGAGACACTTCCTGAAGATTA</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">AAGGGAAGCTGATTGATATTGTGAGCAGCCAGAAGGTTTGGCTTCCTGCCACATGA</span></p>
<p> </p>
<p>[Amino acid sequence]</p>
<p><span style="font-family:arial,helvetica,sans-serif">MAVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPD</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">IKKDRWYNKPLKKGAKRPRVTSGGVSESPSGFSKHIQSNLDFSPVNSASSEENVKYSSSQPEPRTGLSLWDTSPSYIDKLVQGISFSQPTCPDHMLLNSQLLGTPGSSQNPWQRLVKRMTRFFTKL</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">DADKSYQCLKETCEKLGYQWKKSCMNQVTISTTDRRNNKLIFKVNLLEMDDKILVDFRLSKGDGLEFKRHFLKIKGKLIDIVSSQKVWLPAT</span></p>
<p> </p>
<p>[Second structure]</p>
<p>http://www.compbio.dundee.ac.uk/jpred4/results/jp_yBpiZbd/jp_yBpiZbd.results.html</p>
<p>Simple result : (H=alpha helix E=beta sheet)</p>
<p><code>-EEEEE--HHHHHHHHHHHHHHH--EEEEE---EEEEEEE----EEEEEEEE--------E----EEEEE-HHHHHHHHH------EEEEEEE----EEEEEEEE----EEEEEE-------------------EEEEE--HHHHHHHHHH-----EEEEEE----EEEEEEE---EEEEEEE-----------EEE-----EEEEE-HHHHHHHHH------EEEEEE-----EEEEEE-----EEEEEEE---------</code></p>
<p>__________________________________________________________________________________________________________________________________________________________________________________________</p>
<p>[[H.W.1]]</p>
<p> </p>
<p>[DNA sequence]</p>
<p><span style="font-family:arial,helvetica,sans-serif">ATGGCAGTGCCCTTTGTGGAAGACTGGGACTTGGTGCAAACCCTGGGAGAAGGTGCCTATGGAGAAGTTCAACTTGCTGTGAATAGAGTAACTGAAGAAGCAGTCGCAGTGAAGATTGTAGA</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">TATGAAGCGTGCCGTAGACTGTCCAGAAAATATTAAGAAAGAGATCTGTATCAATAAAATGCTAAATCATGAAAATGTAGTAAAATTCTATGGTCACAGGAGAGAAGGCAATATCCAATATTTATTT</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">CTGGAGTACTGTAGTGGAGGAGAGCTTTTTGACAGAATAGAGCCAGACATAGGCATGCCTGAACCAGATGCTCAGAGATTCTTCCATCAACTCATGGCAGGGGTGGTTTATCTGCATGGTATTG</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">GAATAACTCACAGGGATATTAAACCAGAAAATCTTCTGTTGGATGAAAGGGATAACCTCAAAATCTCAGACTTTGGCTTGGCAACAGTATTTCGGTATAATAATCGTGAGCGTTTGTTGAACAAGA</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">TGTGTGGTACTTTACCATATGTTGCTCCAGAACTTCTGAAGAGAAGAGAATTTCATGCAGAACCAGTTGATGTTTGGTCCTGTGGAATAGTACTTACTGCAATGCTCGCTGGAGAATTGCCATGG</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">GACCAACCCAGTGACAGCTGTCAGGAGTATTCTGACTGGAAAGAAAAAAAAACATACCTCAACCCTTGGAAAAAAATCGATTCTGCTCCTCTAGCTCTGCTGCATAAAATCTTAGTTGAGAATCC</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">ATCAGCAAGAATTACCATTCCAGACATCAAAAAAGATAGATGGTACAACAAACCCCTCAAGAAAGGGGCAAAAAGGCCCCGAGTCACTTCAGGTGGTGTGTCAGAGTCTCCCAGTGGATTTTCT</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">AAGCACATTCAATCCAATTTGGACTTCTCTCCAGTAAACAGTGCTTCTAGTGAAGAAAATGTGAAGTACTCCAGTTCTCAGCCAGAACCCCGCACAGGTCTTTCCTTATGGGATACCAGCCCCTC</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">ATACATTGATAAATTGGTACAAGGGATCAGCTTTTCCCAGCCCACATGTCCTGATCATATGCTTTTGAATAGTCAGTTACTTGGCACCCCAGGATCCTCACAGAACCCCTGGCAGCGGTTGGTCA</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">AAAGAATGACACGATTCTTTACCAAATTGGATGCAGACAAATCTTATCAATGCCTGAAAGAGACTTGTGAGAAGTTGGGCTATCAATGGAAGAAAAGTTGTATGAATCAGGTTACTATATCAACAA</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">CTGATAGGAGAAACAATAAACTCATTTTCAAAGTGAATTTGTTAGAAATGGATGATAAAATATTGGTTGACTTCCGGCTTTCTAAGGGTGATGGATTGGAGTTCAAGAGACACTTCCTGAAGATTA</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">AAGGGAAGCTGATTGATATTGTGAGCAGCCAGAAGGTTTGGCTTCCTGCCACATGA</span></p>
<p> </p>
<p>[Amino acid sequence]</p>
<p><span style="font-family:arial,helvetica,sans-serif">MAVPFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITH</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">RDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPD</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">IKKDRWYNKPLKKGAKRPRVTSGGVSESPSGFSKHIQSNLDFSPVNSASSEENVKYSSSQPEPRTGLSLWDTSPSYIDKLVQGISFSQPTCPDHMLLNSQLLGTPGSSQNPWQRLVKRMTRFFTKL</span></p>
<p><span style="font-family:arial,helvetica,sans-serif">DADKSYQCLKETCEKLGYQWKKSCMNQVTISTTDRRNNKLIFKVNLLEMDDKILVDFRLSKGDGLEFKRHFLKIKGKLIDIVSSQKVWLPAT</span></p>
<p> </p>
<p>[Second structure]</p>
<p>http://www.compbio.dundee.ac.uk/jpred4/results/jp_yBpiZbd/jp_yBpiZbd.results.html</p>
<p>Simple result : (H=alpha helix E=beta sheet)</p>
<p><code>-EEEEE--HHHHHHHHHHHHHHH--EEEEE---EEEEEEE----EEEEEEEE--------E----EEEEE-HHHHHHHHH------EEEEEEE----EEEEEEEE----EEEEEE-------------------EEEEE--HHHHHHHHHH-----EEEEEE----EEEEEEE---EEEEEEE-----------EEE-----EEEEE-HHHHHHHHH------EEEEEE-----EEEEEE-----EEEEEEE---------</code></p>
<p>__________________________________________________________________________________________________________________________________________________________________________________________</p>
<p>[[H.W.1]]</p>
