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From Biolecture.org
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<li>BioPHP</li>
</ul>
<p style="margin-left: 40px;">BioPHP is a package of PHP, with classes for DNA and protein sequence analysis, alignment, database parsing, and othe bioinformatics tools. It is not independent programming language from PHP, but a bunch of add-on tools specialized in bioinformatics.<a href="http://en.wikipedia.org/wiki/BioPHP">http://en.wikipedia.org/wiki/BioPHP</a> <a href="http://www.biophp.org/">http://www.biophp.org/</a></p>
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<li>BioPerl</li>
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<p style="margin-left: 40px;">BioPerl is a collection of Perl modules that facilitate the development of Perl scripts for bioinformatics applications. <a href="http://en.wikipedia.org/wiki/BioPerl">http://en.wikipedia.org/wiki/BioPerl</a> <a href="http://www.bioperl.org/wiki/Main_Page">http://www.bioperl.org/wiki/Main_Page</a></p>
<p> As shown in both examples, bioprogramming does not mean by the original programming language only for bioinformatics, but the use of existing general programming language such as Java<a href="http://www.ijcse.com/docs/INDJCSE11-02-06-087.pdf">[3]</a> or R<a href="http://cran.r-project.org/doc/contrib/Krijnen-IntroBioInfStatistics.pdf">[4]</a> specially for bioinformatics. There is even bioinformatics-specialized OS, <a href="http://environmentalomics.org/bio-linux/">Bio-Linux</a>, the Linux distribution with pakages of bioinformatics tools in OS level.</p>
<h1>Genomics</h1>
