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Created page with "<p> </p> <h2>Part 1: Molecular Biology Search and Analysis</h2> <dl><dd>* <a href="http://www.embl-heidelberg.de/srs/srsc?-info||ALI"><strong><font color="#810081">3D-A..."
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<h2>Part 1: Molecular Biology Search and Analysis</h2>
<dl><dd>* <a href="http://www.embl-heidelberg.de/srs/srsc?-info||ALI"><strong><font color="#810081">3D-ALI</font></strong></a> - Database relating Proteins Structures and Sequences (see <a href="gopher://s-crim1.dl.ac.uk/00/EMBnet%20Bioinformation%20Resource%20UK/Data%20%26%20Software/databases/3d_ali/3d_ali.doc"><strong>Documentation</strong></a>) at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/aaa.html"><font color="#810081"><strong>AA Analysis</strong> </font></a><strong>!Recent!</strong> - Protein Identification in SwissProt and PIR using Amino Acid Composition at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* [[AA Composition]] - Protein Identification in SwissProt using Amino Acid Composition at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland (W3)</dd><dd>* <a href="http://expasy.hcuge.ch/ch2d/aasym0.html"><strong>AA Similarity</strong></a> - Compare the Amino Acid Composition of a SwissProt Entry with Other Entries at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland (W3)</dd><dd>* <a href="http://genome.eerie.fr/fasta/align-query.html"><strong>ALIGN</strong></a> <strong>!Recent!</strong> - Optimal Global Alignment of Two Sequences with No Short-cuts at <a href="http://genome.eerie.fr/home.html">EERIE-Nimes</a>, France (W3)</dd><dd>* <a href="http://cbrg.inf.ethz.ch/subsection3_1_1.html"><strong>AllAll</strong></a> - Relationships in a Set of Related Peptides at <a href="http://cbrg.inf.ethz.ch/">ETH-Zürich</a>, Switzerland (W3)</dd><dd>* <a href="http://cbrg.inf.ethz.ch/subsection3_1_2.html"><strong>AllAllDB</strong></a> - Search the All-Against-All Database of SwissProt at <a href="http://cbrg.inf.ethz.ch/">ETH-Zürich</a>, Switzerland (W3)</dd><dd>* <a href="http://geoff.biop.ox.ac.uk/servers/amas_server.html"><strong>AMAS</strong></a> - Analysis of Protein Multiple Sequence Alignments at <a href="http://geoff.biop.ox.ac.uk/">U. Oxford</a>, UK (W3)</dd><dd>* <a href="http://genome.eerie.fr/gcg/bactranslate-query.html"><strong>Backtranslate</strong></a> <strong>!Recent!</strong> - Translate a Protein Sequence back to a Nucleotide Sequence at <a href="http://genome.eerie.fr/home.html">EERIE-Nimes</a>, France (W3)</dd><dd>* <a href="http://kiwi.imgen.bcm.tmc.edu:8088/search-launcher/launcher.html"><strong>BCM Search Launcher</strong></a> <strong>!New!</strong> at <a srs="" href="http://www.bcm.tmc.edu/%3EBaylor%20College%20of%20Medicine%3C/a%3E%20(W3)%3CDD%3E*%20%3Cahref="><strong>BERLIN</strong></a> <strong>!Recent!</strong> - RNA Databank of 5S rRNA and 5S rRNA Gene Sequences at <a href="http://cammsg3.caos.kun.nl:8000/">CAOS/CAMM</a>, The Netherlands (W3)</dd><dd>* <a href="ftp://pdb.pdb.bnl.gov/user_group/biological_units"><strong>Biological Units</strong></a> - Expanded PDB Entries with Full Biological Units at <a href="http://suntid.bnl.gov:8080/bnl.html">Brookhaven National Laboratory</a> (FTP)</dd><dd>* <a href="http://www.molbiol.ox.ac.uk/www/ewan/palette.html"><strong>Biologist's Search Palette</strong></a> - Collection of Search Engines for Biological Databases at <a href="http://www.molbiol.ox.ac.uk/">Oxford U.</a>, UK (W3)</dd><dd>* <a href="http://genome.cs.unc.edu/online.html"><strong>BioSCAN</strong></a> <strong>!New!</strong> - Biological Sequence Comparative Analysis at <a href="http://genome.cs.unc.edu/">U. North Caroline</a> (W3)</dd><dd>* <a href="http://ibm4.carb.nist.gov:4400/bmcd/bmcd.html"><strong>BMCD</strong></a> <strong>!New!</strong> - Biological Macromolecule Crystallization Database at <a href="http://ibm4.carb.nist.gov:4400/carb.html">CARB</a> (W3)</dd><dd>* <a href="http://www.ncbi.nlm.nih.gov/Recipon/bs_seq.html"><strong>BLAST</strong></a> - Basic Local Alignment Research Tool at <a href="http://www.ncbi.nlm.nih.gov/">NCBI</a>, <a href="http://www.genome.ad.jp/SIT/BLAST.html"><strong>BLAST</strong></a> <strong>!Recent!</strong> at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan, <a href="http://genome.eerie.fr/blast/blast-query.html"><strong>BLAST</strong></a> <strong>!Recent!</strong> at <a href="http://genome.eerie.fr/home.html">EERIE-Nimes</a>, France and <a href="http://www.crihan.fr/www/blast.html"><strong>BLAST</strong></a> <strong>!New!</strong> at <a href="http://www.crihan.fr/">CRIHAN</a>, France (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/searches/blitz_input.html"><strong>BLITZ</strong></a> (see <a href="http://www.ebi.ac.uk/searches/blitz_doc.html"><strong>Documentation</strong></a>) at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> and <a href="http://www.ebi.ac.uk/searches/blitz_input.html"><strong>BLITZ</strong></a> at <a href="http://www.ebi.ac.uk/">EBI</a>, UK (W3)</dd><dd>* <a href="http://www.blocks.fhcrc.org/"><strong>BLOCKS</strong></a> - Database of Highly Conserved Regions in Proteins (W3) and <a href="gopher://klaatu.fhcrc.org/77/.indexes/.blocksindex/blocksindex"><strong>BLOCKS-WAIS</strong></a> (Gopher) at <a href="gopher://klaatu.fhcrc.org/">Fred Hutchinson Cancer Research Center</a>, <a href="http://www.embl-heidelberg.de/srs/srsc?-info||BLOCKS"><strong>BLOCKS</strong></a> at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> and<a href="http://www.public.iastate.edu/~pedro/blocks_query.html"><strong>BLOCKS-Search</strong></a> w/ search from <a href="http://www.cc.iastate.edu/welcome.html">Iowa State</a> (W3)</dd><dd>* <a href="http://www.biochem.ucl.ac.uk/bsm/cath/CATHintro.html"><strong>CATH</strong></a> <strong>!New!</strong> - Protein Structure Classification at <a href="http://www.biochem.ucl.ac.uk/">UCL-London</a>, UK (W3)</dd><dd>* <a href="http://alces.med.umn.edu/cuse.html"><strong>Codon Usage</strong></a> - Analysis of Different ORFs in a Gene Sequence at <a href="http://www.umn.edu/">U. Minnesota</a> (W3)</dd><dd>* <a href="http://ben.vub.ac.be/srs/srsc?-info+CPGISLE"><strong>CpGIsle</strong></a> <strong>!Recent!</strong> - CpG Islands Database at <a href="http://ben.vub.ac.be/">BEN</a>, Belgium (W3)</dd><dd>* <a href="http://cbrg.inf.ethz.ch/subsection3_1_7.html"><strong>Darwin</strong></a> - Data Analysis and Retrieval With Indexed Nucleotide/Peptide Sequences at <a href="http://cbrg.inf.ethz.ch/">ETH-Zürich</a>, Switzerland (W3)</dd><dd>* <a href="http://www.ncbi.nlm.nih.gov/dbEST/index.html"><strong>dbEST</strong></a> - Database of Expressed Sequence Tags at <a href="http://www.ncbi.nlm.nih.gov/">NCBI</a> (W3)</dd><dd>* <a href="http://www.genome.ad.jp/dbget/dbget.html"><strong>DBGET</strong></a> - Integrated Database Retrieval System (w/ <a href="http://www.genome.ad.jp/dbget/dbget.links.html"><strong>diagram links</strong></a>) at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan (W3)</dd><dd>* <a href="gopher://gopher.nig.ac.jp/7waissrc%3a/DDBJ_Gopher_WAIS/DNA_seq_index_search.src"><strong>DDBJ</strong></a> - DNA Database of Japan at <a href="http://www.nig.ac.jp/">National Institute of Genetics</a>, Japan (Gopher)</dd><dd>* <a href="http://alces.med.umn.edu/rawdot.html"><strong>Dot Plot</strong></a> - Compare a DNA Sequence with Itself at <a href="http://www.umn.edu/">U. Minnesota</a> (W3)</dd><dd>* <a href="http://www.nih.gov/molecular_modeling/drugbank.html"><strong>DrugBank</strong></a> <strong>!New!</strong> - Three-dimensional Drug Structure Databank at <a href="http://www.nih.gov/">NIH</a> (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/srs/srsc?-info+DSSP"><strong>DSSP</strong></a> <strong>!New!</strong> - Database of Secondary Structure of Proteins from PDB (see <a href="http://www.sander.embl-heidelberg.de/dssp/descrip.html"><strong>Documentation</strong></a>) at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://www.gdb.org/Dan/proteins/ec-enzyme.html"><strong>EC Enzyme</strong></a> at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> and <a href="http://www.genome.ad.jp/htbin/show_ECtable"><strong>EC Number Table</strong></a> at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan and <a href="http://specter.dcrt.nih.gov:8004/Enzymes/enzymes.html"><strong>GenoBase Enzyme Index</strong></a> at <a href="http://www.nih.gov/">NIH</a> (W3)</dd><dd>* <a href="gopher://biox.embnet.unibas.ch:13021/77/.index/embl/index"><strong>EMBL</strong></a> - Nucleotide Sequence Database and <a href="gopher://biox.embnet.unibas.ch:13021/77/.index/xembl/index"><strong>EMBL-New Entries</strong></a> at <a href="http://www.ch.embnet.org/">EMBnet-Basel</a> (Gopher)</dd><dd>* <a href="http://www.ebi.ac.uk/srs/srsc?-info||EMNEW"><strong>EMNEW</strong></a> - Index of New EMBL Sequences at <a href="http://www.ebi.ac.uk/">EBI</a>, UK (W3)</dd><dd>* <a href="http://specter.dcrt.nih.gov:8004/Compound/compound_toc_by_name.html"><strong>EMP Compound</strong></a> and <a href="http://specter.dcrt.nih.gov:8004/Pathway/pathway_toc_by_name.html"><strong>EMP Pathways</strong></a> - Selkov Enzyme and Metabolic Pathway (EMP) Database at <a href="http://www.nih.gov/">NIH</a> (W3)</dd><dd>* <a href="http://www.mcs.anl.gov/home/compbio/pathways/pathways.html"><strong>EMP Metabolic Pathways</strong></a> - Navigation in Metabolic Pathways from <a href="http://www.mcs.anl.gov/home/compbio/default.html">MCS-Computational Biology</a> at <a href="http://www.anl.gov/">Argonne National Laboratory</a> (W3)</dd><dd>* <a href="http://www.ncbi.nlm.nih.gov/Search/Entrez/index.html"><strong>ENTREZ</strong></a> - Protein and Nucleotide Database (see <a href="http://atlas.nlm.nih.gov:5700/WWW2/WWW2_paper2.html"><strong>Documentation</strong></a>) at <a href="http://www.ncbi.nlm.nih.gov/">NCBI</a> (W3)</dd><dd>* <a href="http://expasy.hcuge.ch/sprot/enzyme.html"><strong>ENZYME</strong></a> - The Enzyme Data Bank at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/srs/srsc?-id||781260221_129.186.4.14||-info||EPD"><strong>EPD</strong></a> - Eucaryotic Promoter Database at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a>, Germany and <a href="http://www.genome.ad.jp/htbin/bfind_epd"><strong>EPD</strong></a> <strong>!New!</strong> at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan (W3)</dd><dd>* <a href="http://bioslave.uio.no:8001/srs/srsc?-info+EPO"><strong>EPO</strong></a> <strong>!New!</strong> - European Patent Office Nucleotide Database at <a href="http://www.no.embnet.org/">BiO/U. Oslo</a>, Norway (W3) and <a href="gopher://gopher.csc.fi/7waissrc%3a/tiede/BioBox/bionic/.epo.src"><strong>EPO</strong></a> at <a href="http://www.csc.fi/CSC_english.html">CSC</a>, Finland (Gopher)</dd><dd>* <a href="http://www.ebi.ac.uk/searches/fasta.html"><strong>FASTA</strong></a> - Compare a Nucleic Acid Sequence to Nucleotide Sequence Databases (w/ updates) at <a href="http://www.ebi.ac.uk/">EBI</a>, UK, <a href="http://genome.eerie.fr/fasta/fasta-query.html"><strong>FASTA</strong></a> <strong>!Recent!</strong> at <a href="http://genome.eerie.fr/home.html">EERIE-Nimes</a>, France and <a href="http://www.crihan.fr/www/fasta.html"><strong>FASTA</strong></a> <strong>!New!</strong> at <a href="http://www.crihan.fr/">CRIHAN</a>, France (W3)</dd><dd>* <a href="http://morgan.harvard.edu/"><strong>FlyBase</strong></a> <strong>!New!</strong> - Genetic and Molecular Database for <em>Drosophila</em> at <a href="http://www.harvard.edu/">Harvard U.</a> (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/srs/srsc?-info||FSSP"><strong>FSSP</strong></a> - Database of Families of Structurally Similar Proteins derived from PDB at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://www.abc.hu/blast.html"><strong>FTHOM</strong></a> <strong>!Recent!</strong> - Compare Protein Domain Homology at <a href="http://www.abc.hu/">ABC</a>, Hungary (W3)</dd><dd>* <a href="http://gdbwww.gdb.org/"><strong>GDB</strong></a> - Human Genome Data Base at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (W3)</dd><dd>* <a href="http://ncbi.nlm.nih.gov:2555/r_genbank2.html"><strong>GenBank Database</strong></a> (+Updates) at <a href="http://www.ncbi.nlm.nih.gov/">NCBI</a> and <a href="http://ibc.wustl.edu/wu_fetch.html"><strong>GenBank-Fetch</strong></a> at <a href="http://ibc.wustl.edu/">Washington U.</a> (W3)</dd><dd>* <a href="http://dot.imgen.bcm.tmc.edu:9331/gene-finder/gf.html"><strong>Gene Finder</strong></a> <strong>!New!</strong> - Predict Gene Structure, Internal Exons and Splicing Sites in DNA and Exon-Exon Junstion in cDNA at <a href="http://www.bcm.tmc.edu/%3EBaylor%20College%20of%20Medicine%3C/a%3E%20(W3)%3CDD%3E*%20%3Ca%20href="><strong>GenoBase</strong></a> at <a href="http://www.nih.gov/">NIH</a> (W3)</dd><dd>* <a href="http://genome.eerie.fr/Genome-DBS.html"><strong>Genome Databases</strong></a> <strong>!Recent!</strong> and <a href="http://genome.eerie.fr/Genome_Centre.html"><strong>Genome Centers</strong></a> <strong>!Recent!</strong> - World Wide Links at <a href="http://genome.eerie.fr/">EERIE-Nimes</a>, France (W3)</dd><dd>* <a href="http://www.ri.bbsrc.ac.uk/genome_workstation/workstation.html"><strong>Genome Workstation</strong></a> <strong>!New!</strong> - Genome Related Links at <a href="http://www.ri.bbsrc.ac.uk/">Roslin Institute</a>, UK (W3)</dd><dd>* <a href="http://biotech.chem.indiana.edu/WebChris/maps.html"><strong>Genomic Maps</strong></a> - Links to Genome Specific Resources at <a href="http://biotech.chem.indiana.edu/">Biotech-Indiana</a> (W3)</dd><dd>* <a href="http://www.gdb.org/Dan/gq/gq.form.html"><strong>GenQuest</strong></a> - Search Against Protein Databases with the Q server at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (W3)</dd><dd>* <a href="http://avalon.epm.ornl.gov/Grail-bin/EmptyGrailForm"><strong>Grail</strong></a> <strong>!New!</strong> - Analysis of the Protein Coding Potential of a DNA Sequence (see <a href="ftp://arthur.epm.ornl.gov/pub/xgrail/Manual.grail-genquest.July94"><strong>Documentation</strong></a>) at <a href="http://avalon.epm.ornl.gov/">ORNL</a> (W3)</dd><dd>* <a href="http://www.ncgr.org/gsdb/"><strong>GSDB</strong></a> - Genome Sequence Database at <a href="http://www.ncgr.org/ncgr/ncgr.html">NCGR</a> (W3)</dd><dd>* <a href="http://expasy.hcuge.ch/www/guess-prot.html"><strong>GuessProt</strong></a> - Selects SwissProt proteins given pI and Mw at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland (W3)</dd><dd>* <a href="http://ibc.wustl.edu/hhs/"><strong>HHS</strong></a> - SwissProt and PDB Systematic Sequence Classification Database at <a href="http://ibc.wustl.edu/">Washington U.</a> (W3)</dd><dd>* <a href="http://cammsg3.caos.kun.nl:8000/srs/srsc?-info+HOVERGEN"><strong>HOVERGEN</strong></a> <strong>!Recent!</strong> - Database of Homologous Vertebrate Genes at <a href="http://cammsg3.caos.kun.nl:8000/">CAOS/CAMM</a>, The Netherlands (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/srs/srsc?-info||HSSP"><strong>HSSP</strong></a> - Database of Homology-Derived Structures of Proteins based on PDB and SwissProt at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="gopher://gopher.gdb.org/77/.INDEX/kabat"><strong>Kabat </strong></a>- Database of Proteins of Immunological Interest at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (Gopher)</dd><dd>* <a href="http://www.prosci.uci.edu/kinemages/KinemageIndex.html"><strong>Kinemage-Index</strong></a> - "Kinetical Images" by Protein Type at <a href="http://www.prosci.uci.edu/">Protein Science</a> (W3)</dd><dd>* <a href="http://ibc.wustl.edu/klotho/"><strong>Klotho</strong></a> - Biochemical Compounds Declarative Database at <a href="http://ibc.wustl.edu/">Washington U.</a> (W3)</dd><dd>* <a href="http://genome.eerie.fr/fasta/lalign-query.html"><strong>LALIGN</strong></a> <strong>!Recent!</strong> - Calculates the N-Best Local Alignments Between Two Sequences at <a href="http://genome.eerie.fr/home.html">EERIE-Nimes</a>, France (W3)</dd><dd>* <a href="http://genome.eerie.fr/fasta/lfasta-query.html"><strong>LFASTA</strong></a> <strong>!Recent!</strong> - Local Similarity Searches Between Two Sequences Showing Local Alignments at <a href="http://genome.eerie.fr/home.html">EERIE-Nimes</a>, France (W3)</dd><dd>* <a href="http://www.genome.ad.jp/htbin/bfind_ligand"><strong>LIGAND</strong></a> - Ligand Chemical Database for Enzyme Reactions at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan (W3)</dd><dd>* <a href="gopher://gopher.nih.gov/77/gopherlib/indices/limb/index"><strong>LiMB</strong></a> - Listing of Molecular Biology Databases at <a href="http://www.nih.gov/">NIH</a> (Gopher) and <a href="http://www.embl-heidelberg.de/srs/srsc?-id||777855676_129.186.4.14||-info||LIMB"><strong>LiMB</strong></a> at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://genome.eerie.fr/gcg/map-query.html"><strong>Map</strong></a> <strong>!Recent!</strong> - Restriction Analysis and Translation of a DNA Sequence at <a href="http://genome.eerie.fr/home.html">EERIE-Nimes</a>, France (W3)</dd><dd>* <a href="http://cbrg.inf.ethz.ch/subsection3_1_3.html"><strong>MassSearch</strong></a> - Search SwissProt or EMBL Databases by Protein Mass After Digestion at <a href="http://cbrg.inf.ethz.ch/">ETH-Zürich</a>, Switzerland (W3)</dd><dd>* <a href="http://cgsc.biology.yale.edu/metab.html"><strong>Metabolic Database</strong></a> <strong>!Recent!</strong> - Metabolic Reactions and Pathways at <a href="http://cgsc.biology.yale.edu/">CGSC-Yale U.</a> and <a href="http://moulon.inra.fr/cgi-bin/nph-acedb3.1/acedb/metabolisme?find+Reaction_or_pathway%3By+14+69"><strong>Metabolic Database</strong></a> <strong>!Recent!</strong> at <a href="http://moulon.inra.fr/">INRA-Moulon</a>, France (W3)</dd><dd>* <a href="http://www.informatics.jax.org/mgd.html"><strong>MGD</strong></a> - Mouse Genome Database at <a href="http://www.informatics.jax.org/">Jackson Laboratory</a> (W3)</dd><dd>* <a href="gopher://wehil.wehi.edu.au/11/MHCPEP.DB"><strong>MHCPEP</strong></a> - Database of Major Histocompatibility Complex (MHC) Binding Peptides at <a href="http://www.wehi.edu.au/">WEHI-Melbourne</a>, Australia (Gopher)</dd><dd>* <a href="http://www.nih.gov/htbin/pdb"><strong>Molecules R US</strong></a> - Interactive Text and Images of PDB Files at <a href="http://www.nih.gov/">NIH</a> (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/srs/srsc?-id||777855676_129.186.4.14||-info||MOLPROBE"><strong>MPBD</strong></a> - Molecular Probe Data Base at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3) and <a href="gopher://gopher.slu.se/7waissrc%3a/wais-dbs/Biology/Oligos"><strong>MPDB</strong></a> at <a href="gopher://gopher.slu.se/">U. Agricultural Sciences</a>, Sweeden (Gopher)</dd><dd>* <a href="http://cuhhca.hhmi.columbia.edu/moose/"><strong>MOOSE</strong></a> <strong>!New!</strong> - Macromolecular Object Oriented Search Engine to Extract PDB Contained Information at <a href="http://cuhhca.hhmi.columbia.edu/">Columbia U.</a> (W3)</dd><dd>* <a href="http://ibc.wustl.edu/msa.html"><strong>MSA</strong></a> - Multiple Sequence Alignment at <a href="http://ibc.wustl.edu/">Washington U.</a> (W3)</dd><dd>* <a href="http://www.genome.ad.jp/SIT/MOTIF.html"><strong>MOTIF</strong></a> <strong>!Recent!</strong> - Search Patterns in Protein Sequences at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan <a href="http://www.public.iastate.edu/~pedro/motif_query.html"><strong>Motif</strong></a> at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan w/ search from <a href="http://www.cc.iastate.edu/welcome.html">Iowa State</a> (W3)</dd><dd>* <a href="http://ndbserver.rutgers.edu/"><strong>NDB</strong></a> - Nucleic Acid Database at Rutgers U. (W3)</dd><dd>* <a href="http://www.public.iastate.edu/~pedro/nnpredict_query.html"><strong>nnPredict</strong></a> - Predict Protein Secondary Structure at <a href="http://wormworld.ucsf.edu/">UCSF</a> w/ search from <a href="http://www.cc.iastate.edu/welcome.html">Iowa State</a> (W3)</dd><dd>* <a href="http://www.gdb.org/Dan/proteins/nrl3d.html"><strong>NRL_3D</strong></a> - Sequence/Structure Database derived from PDB at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> and <a href="http://www.embl-heidelberg.de/srs/srsc?-info||NRL3D"><strong>NRL_3D</strong></a> at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://ddbjs4h.genes.nig.ac.jp/"><strong>NRSub</strong></a> <strong>!New!</strong> - A Non-Redundant DNA Sequence Database for <em>Bacillus subtilis</em> at <a href="http://www.nig.ac.jp/">National Institute of Genetics</a>, Japan (W3)</dd><dd>* <a href="http://cbrg.inf.ethz.ch/subsection3_1_4.html"><strong>NuclPepSearch</strong></a> - Search SwissProt for a Nucletide Sequence at <a href="http://cbrg.inf.ethz.ch/">ETH-Zürich</a>, Switzerland (W3)</dd><dd>* <a href="http://gdbwww.gdb.org/omimdoc/omimtop.html"><strong>OMIM</strong></a> - Online Mendelian Inheritance in Man at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (W3)</dd><dd>* <a href="gopher://megasun.bch.umontreal.ca/11/Organelles/Genomes"><strong>Organelle Genome</strong></a> <strong>!New!</strong> - A Sequence Database at <a href="gopher://megasun.bch.umontreal.ca/">U. Montreal</a> (Gopher)</dd><dd>* <a href="http://biotech.chem.indiana.edu/lib/orgstrain.html"><strong>Organisms and Strains</strong></a> - Links to Databases Specific to Organism and Cell Collections at <a href="http://biotech.chem.indiana.edu/">Biotech-Indiana</a> (W3)</dd><dd>* <a href="http://www.gdb.org/Dan/proteins/owl.html"><strong>OWL</strong></a> - Non-Redundant Protein Sequence Database (Updated Daily) at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (W3)</dd><dd>* <a href="http://www-pdd.ncifcrf.gov/PDD/GEN-docs/indexGEN.html"><strong>PDD</strong></a> <strong>!New!</strong> - Protein Disease Database at <a href="http://www-pdd.ncifcrf.gov/">NIMH-NCI</a> (W3)</dd><dd>* <a href="http://bach.pdb.bnl.gov:4148/cgi-bin/browse"><strong>PDB-Browser</strong></a>, <a href="gopher://pdb.pdb.bnl.gov/77/xfullindex/full"><strong>PDB-Index</strong></a> and <a href="gopher://pdb.pdb.bnl.gov/77/xstatusindex/status"><strong>PDB-Pending</strong></a> - <a href="http://www.pdb.bnl.gov/">Protein Data Bank</a> Structures at <a href="http://suntid.bnl.gov:8080/bnl.html">Brookhaven National Laboratory</a>, <a href="http://www.genome.ad.jp/htbin/bfind_pdb"><strong>PDB</strong></a> at <a href="http://www.genome.ad.jp/">GenomeNet</a> Japan, <a href="http://www.ibf.unige.it/7/sci/.PDB/pdbsearch"><strong>PDB</strong></a> at <a href="http://www.ibf.unige.it/">U. Genova</a>, Italy, <a href="http://www.ucmb.ulb.ac.be/pdb_seq_rel_jan94"><strong>PDB-List</strong></a> and <a href="http://www.ucmb.ulb.ac.be/pdb_annot_jan94"><strong>PDB-Annotated</strong></a> at <a href="http://www.ucmb.ulb.ac.be/index.html">Brussels Free U.</a>, Belgium and <a href="http://www.sander.embl-heidelberg.de/pdbsel/explanation.html"><strong>PDB-Select</strong></a> at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://www.nih.gov/molecular_modeling/pdb_at_a_glance.html"><strong>PDB At A Glance</strong></a> - Hierarchic Access to PDB Files at <a href="http://www.nih.gov/">NIH</a> (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/srs/srsc?-id||781260221_129.186.4.14||-info||PDBFINDER"><strong>PDBFINDER</strong></a> - A Database Containing PDB, DSSP and HSSP Information (see <a href="http://www.sander.embl-heidelberg.de/pdbfinder/overview.html"><strong>Documentation</strong></a>) at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://www.genome.ad.jp/htbin/bfind_pdbstr"><strong>PDBSTR</strong></a> - Re-organized Protein Data Bank at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan (W3)</dd><dd>* <a href="http://cbrg.inf.ethz.ch/subsection3_1_5.html"><strong>PepPepSearch</strong></a> - Search SwissProt for a Peptide Sequence at <a href="http://cbrg.inf.ethz.ch/">ETH-Zürich</a>, Switzerland (W3)</dd><dd>* <a href="http://www.public.iastate.edu/~pedro/pprotein_query.html"><strong>PHD</strong></a> - Predict Protein Secondary Structure at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> w/ search from <a href="http://www.cc.iastate.edu/welcome.html">Iowa State</a> (W3)</dd><dd>* <a href="http://www.pasteur.fr/sas/phy/boot-sub.html"><strong>PHILIP-Bootstrapping Analysis</strong></a> <strong>!Recent!</strong> - Divergence Between Protein or Nucleotide Sequences at <a href="http://www.pasteur.fr/">Institut Pasteur</a>, France (W3)</dd><dd>* <a href="http://genome.eerie.fr/gcg/phospepsort-query.html"><strong>Phospepsort</strong></a> <strong>!New!</strong> - Digest Phosphorylated Peptide Sequences at <a href="http://genome.eerie.fr/home.html">EERIE-Nimes</a>, France (W3)</dd><dd>* <a href="http://expasy.hcuge.ch/ch2d/pi_tool.html"><strong>pI/Mw</strong></a> - Compute the Theoretical pI and Molecular Weight of a Protein Sequence at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland (W3)</dd><dd>* <a href="http://genome.eerie.fr/gcg/pileup-query.html"><strong>Pileup</strong></a> <strong>!Recent!</strong> - Align Protein or Nucleotide Sequences at <a href="http://genome.eerie.fr/home.html">EERIE-Nimes</a>, France (W3)</dd><dd>* <a href="http://www.gdb.org/Dan/proteins/pir.html"><strong>PIR</strong></a> - Protein Identification Resource Database at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/srs/srsc?-info||PIRALN"><strong>PIRALN</strong></a> - Database of Sequence Alignments based on PIR at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://www.genome.ad.jp/htbin/bfind_pmd"><strong>PMD</strong></a> - Protein Mutant Database at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan and <a href="http://www.embl-heidelberg.de/srs/srsc?-info||PMD"><strong>PMD</strong></a> at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://alces.med.umn.edu/pmotif.html"><strong>PMOTIF</strong></a> - Search Protein Motifs in Gene Sequence at <a href="http://www.umn.edu/">U. Minnesota</a> (W3)</dd><dd>* <a href="http://www.biophys.uni-duesseldorf.de/service/polandform.html"><strong>Poland</strong></a> - Calculate the Thermal Denaturation Profile of Double Stranded RNA or DNA at <a href="http://www.biophys.uni-duesseldorf.de/">Uni-Düsseldorf</a>, Germany (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/predictprotein/predictprotein.html"><strong>PredictProtein</strong></a> <strong>!Recent!</strong> - Predict Protein Secondary Structure at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://www.genome.ad.jp/htbin/bfind_prf"><strong>PRF</strong></a> - Protein Research Foundation Sequence Database at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan (W3)</dd><dd>* <a href="http://alces.med.umn.edu/rawprimer.html"><strong>Primer Selection</strong></a> - Select Primers in a Gene Sequence at <a href="http://www.umn.edu/">U. Minnesota</a> (W3)</dd><dd>* <a href="http://www.ch.embnet.org/srs/srsc?-info+PRINTS"><strong>PRINTS</strong></a> <strong>!Recent!</strong> - Protein Motif Fingerprints Database (see <a href="file://gopher.embl-heidelberg.de/pub/databases/prints/prints.doc"><strong>Documentation</strong></a>) at <a href="http://www.ch.embnet.org/">EMBnet-Basel</a>, Switzerland (W3)</dd><dd>* <a href="http://www.sanger.ac.uk/~esr/prodom.html"><strong>ProDom</strong></a> - A Protein Domain Database and <a href="http://www.sanger.ac.uk/~esr/prodom-blast.html"><strong>ProDom-Search</strong></a> at <a href="http://www.sanger.ac.uk/">Sanger Centre</a>, UK, <a href="http://www.embl-heidelberg.de/srs/srsc?-id||777855676_129.186.4.14||-info||PRODOM"><strong>ProDom</strong></a> at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> and <a href="http://www.public.iastate.edu/~pedro/prodom_help.html"><strong>ProDom-Info</strong></a> at <a href="http://www.cc.iastate.edu/welcome.html">Iowa State</a> (W3)</dd><dd>* <a href="gopher://bmerc-gopher.bu.edu/11/Databases/prolink"><strong>ProLink</strong></a> - Integrated Database of Protein Structure, Sequence Homology, and Functional Pattern Information at <a href="http://bmerc-www.bu.edu/">BMERC</a> (Gopher)</dd><dd>* <a href="http://www.embl-heidelberg.de/prs.page"><strong>PROPSEARCH</strong></a> - Protein Sequence Search for Structural Homology Based on Aminoacid Properties at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://expasy.hcuge.ch/sprot/prosite.html"><strong>PROSITE</strong></a> - Protein Sites and Patterns Database at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland and <a href="http://www.ebi.ac.uk/searches/prosite_input.html"><strong>PROSITE-Search</strong></a> <strong>!Recent!</strong> at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="file://ftp.embl-heidelberg.de/pub/databases/protein_extras"><strong>Protein-Extras</strong></a> at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (FTP)</dd><dd>* <a href="http://www.public.iastate.edu/~pedro/p_families.html"><strong>Protein Families</strong></a> - Links to Information on Different Protein Families at <a href="http://www.cc.iastate.edu/">Iowa State</a> (W3)</dd><dd>* <a href="file://cb-iris.stanford.edu/pub/ProteinMovements/ProtMotDB.main.html"><strong>Protein Motions</strong></a> <strong>!New!</strong> - DataBase of Protein Movements at <a href="http://hyper.stanford.edu/">Stanford U.</a> (W3)</dd><dd>* <a href="http://psort.nibb.ac.jp/"><strong>PSORT</strong></a> <strong>!Recent!</strong> - Predict Protein Sorting Signals Coded in Amino Acid Sequences at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan (W3)</dd><dd>* <a href="http://dot.imgen.bcm.tmc.edu:9331/pssprediction/pssp.html"><strong>PSSP</strong></a> <strong>!New!</strong> - Protein Secondary Structure Prediction at <a puu="" protein_extras="" databases="" pub="" ftp.embl-heidelberg.de="" href="http://www.bcm.tmc.edu/%3EBaylor%20College%20of%20Medicine%3C/a%3E%20(W3)%3CDD%3E*%20%3Cahref="><strong>PUU</strong></a> - Protein Domains Database Based on PDB-Select at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (FTP)</dd><dd>* <a href="http://geta.life.uiuc.edu/index.html"><strong>RDP</strong></a> <strong>!New!</strong> - Ribosomal Database Project at U. Illinois (W3)</dd><dd>* <a href="http://vent.neb.com/rebase/rebase.html"><strong>ReBase</strong></a> <strong>!New!</strong> - Restriction Enzyme Database at <a href="http://vent.neb.com/">New England Biolabs</a>, <a href="http://www.embl-heidelberg.de/srs/srsc?-id||777855676_129.186.4.14||-info||REBASE"><strong>ReBase</strong></a> at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> and <a href="http://www.gdb.org/Dan/rebase/rebase.html"><strong>ReBase</strong></a> at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (W3)</dd><dd>* <a href="http://pundit.colorado.edu:8080/"><strong>RNA Secondary Structures</strong></a> - Information on Group I Introns and rRNA at <a href="http://www.colorado.edu/">U. Colorado-Boulder</a> (W3)</dd><dd>* <a href="http://www-rrna.uia.ac.be/rrna/index.html"><strong>rRNA</strong></a> <strong>!New!</strong> - Databases of Ribosomal Subunit RNA Sequences at <a href="http://www.uia.ac.be/">U. Antwerp</a>, Belgium (W3)</dd><dd>* <a href="http://base.icgeb.trieste.it/sbase/"><strong>SBASE</strong></a> - Library of Protein Domains and <a href="http://base.icgeb.trieste.it/sbase/blast.html"><strong>SBASE-Search</strong></a> at <a href="http://base.icgeb.trieste.it/">ICGEB-Trieste</a>, Italy (W3)</dd><dd>* <a href="http://geoff.biop.ox.ac.uk/servers/scanps_server.html"><strong>SCANPS</strong></a> - Scan Protein Sequences at <a href="http://geoff.biop.ox.ac.uk/">U. Oxford</a>, UK (W3)</dd><dd>* <a href="http://www.bio.cam.ac.uk/scop/"><strong>SCOP</strong></a> - Structural Classification of Proteins at <a href="http://www.bio.cam.ac.uk/">Cambridge</a>, UK and <a href="http://www.nick.med.usf.edu/scop/index.html"><strong>SCOP</strong></a> at <a href="http://www.nick.med.usf.edu/">U. South Florida</a> (W3)</dd><dd>* <a href="http://dot.imgen.bcm.tmc.edu:9331/seq-annot/home.html"><strong>Sequence Annotation</strong></a> - Annotations on NCBI Sequences at <a alces.med.umn.edu="" href="http://www.bcm.tmc.edu/%3EBaylor%20College%20of%20Medicine%3C/a%3E%20(W3)%3CDD%3E*%20%3Cahref="><strong>Sequence Translation</strong></a> - Translate Gene Sequences at <a href="http://www.umn.edu/">U. Minnesota</a> (W3)</dd><dd>* <a href="ftp://dasher.wustl.edu/pub/sleuth/data"><strong>Sleuth</strong></a> - Amino Acid Conformation and Solvent Accessibility of PDB Files at <a href="http://ibc.wustl.edu/">Washington U.</a> (FTP)</dd><dd>* <a href="http://www.ibcp.fr/predict.html"><strong>SOPM</strong></a> <strong>!New!</strong> - Self Optimized Prediction Method for Prediction of Protein Secondary Structure at <a href="http://www.ibcp.fr/">IBCP-CNRS</a>, France (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/srs/srsc"><strong>SRSWWW</strong></a> - Network Browser for Databanks in Molecular Biology (w/ <a href="http://www.embl-heidelberg.de/srs/net.html"><strong>diagram links</strong></a>) at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://www.ch.embnet.org/srs/index.html"><strong>SRSWWW-Directory</strong></a> <strong>!Recent!</strong> - Directory of SRSWWW Network Browsers for Biological Databanks and <a href="http://www.ch.embnet.org/srs/status.html"><strong>SRSWWW-Global Status</strong></a> <strong>!Recent!</strong> at <a href="http://www.ch.embnet.org/">EMBnet-Basel</a> (W3)</dd><dd>* [http://coot.embl.de/SSCP/ SSCP]: <font size="2">SSCP, <big>Secondary Structural Content Prediction</big></font><br />
* <a href="http://genome.eerie.fr/fasta/ssearch-query.html"><strong>SSEARCH</strong></a> <strong>!Recent!</strong> - Universal Sequence Comparison Using the Smith-Waterman Algorithm at <a href="http://genome.eerie.fr/home.html">EERIE-Nimes</a>, France (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/sspred/sspred_info.html"><strong>SSPRED</strong></a> <strong>!New!</strong> - Predict the Secondary Structure of Proteins at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a>, Germany (W3)</dd><dd>* <a href="http://www.ucmb.ulb.ac.be/~joan/survol/form.html"><strong>SURVOL</strong></a> <strong>!New!</strong> - Analysis of Protein Atomic Volumes at <a href="http://www.ucmb.ulb.ac.be/">UCMB</a>, Belgium (W3)</dd><dd>* <a href="http://expasy.hcuge.ch/ch2d/ch2d-top.html"><strong>Swiss-2DPage</strong></a> - Two-dimensional Polyacrylamide Gel Electrophoresis Database at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland (W3)</dd><dd>* <a href="http://www.ebi.ac.uk/srs/srsc?-info+SWISSDOM"><strong>SWISSDOM</strong></a> - SwissProt Entries in a ProDom Map at <a href="http://www.ebi.ac.uk/">EBI</a>, UK (W3)</dd><dd>* <a href="http://expasy.hcuge.ch/swissmod/SWISS-MODEL.html"><strong>Swiss-Model</strong></a> - Automated Protein Modelling at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland (W3)</dd><dd>* <a href="http://www.ebi.ac.uk/srs/srsc?-info||SWISSNEW"><strong>SWISSNEW</strong></a> - New SwissProt Sequences at <a href="http://www.ebi.ac.uk/">EBI</a>, UK (W3)</dd><dd>* <a href="http://expasy.hcuge.ch/sprot/sprot-top.html"><strong>SwissProt</strong></a> - Protein Sequence Database (+ Weekly Updates) at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland (W3)</dd><dd>* <a href="http://expasy.hcuge.ch/swisshop/SwissShopReq.html"><strong>Swiss-Shop</strong></a> - Automated SwissProt and Prosite Information Queries at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland (W3)</dd><dd>* <a href="http://www.gdb.org/Dan/tbase/tbase.html"><strong>TBASE</strong></a> <strong>!Recent!</strong> - Transgenic/Targeted Mutation Database at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (W3)</dd><dd>* <a href="http://genome.eerie.fr/fasta/tfasta-query.html"><strong>TFASTA</strong></a> <strong>!Recent!</strong> - Match a Protein Sequence Against All Six Frames of GenBank Sequences at <a href="http://genome.eerie.fr/home.html">EERIE-Nimes</a>, France (W3)</dd><dd>* <a href="gopher://gopher.nih.gov/77/gopherlib/indices/tfd/index"><strong>TFD</strong></a> - Transcription Factor Database at <a href="http://www.nih.gov/">NIH</a> (Gopher)</dd><dd>* <a href="http://www.embl-heidelberg.de/srs/srsc?-info+TFFACTOR"><strong>TFFACTOR</strong></a> and <a href="http://www.embl-heidelberg.de/srs/srsc?-info+TFSITE"><strong>TFSITE</strong></a> - Transcription Factor Data at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://alces.med.umn.edu/rawtm.html"><strong>Tm</strong></a> - Oligonucleotide Melting Point Determination at <a href="http://www.umn.edu/">U. Minnesota</a> (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/tmap/tmap_sin.html"><strong>TMAP</strong></a> - Identification of Transmembrane Segments on a Protein Sequence at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="ftp://ulrec3.unil.ch/pub/tmbase"><strong>TMBASE</strong></a> - Transmembrane Protein Database at <a href="http://www.unil.ch/">U. Lausanne</a>, Switzerland (FTP)</dd><dd>* <a href="http://genome.eerie.fr/gcg/translate-query.html"><strong>Translate</strong></a> <strong>!Recent!</strong> - Translate a Nucleotide Sequence into Amino Acid Sequence at <a href="http://genome.eerie.fr/home.html">EERIE-Nimes</a>, France (W3)</dd><dd>* <a href="http://cbrg.inf.ethz.ch/subsection3_1_6.html"><strong>TreeGen</strong></a> - Tree Generation from Distance Data at <a href="http://cbrg.inf.ethz.ch/">ETH-Zürich</a>, Switzerland (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/srs/srsc?-id||781260221_129.186.4.14||-info||TREMBL"><strong>TREMBL</strong></a> - Database of Translated Peptide Sequences of All CDS Features from EMBL Sequences at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://cammsg3.caos.kun.nl:8000/srs/srsc?-info+VECBASE"><strong>VecBase</strong></a> <strong>!Recent!</strong> - Cloning Vector Sequence Database.at <a href="http://cammsg3.caos.kun.nl:8000/">CAOS/CAMM</a>, The Netherlands (W3)</dd><dd>* <a href="http://ben.vub.ac.be/srs/srsc?-info+VECTOR"><strong>VECTOR</strong></a> <strong>!Recent!</strong> - Cloning Vector Database at <a href="http://ben.vub.ac.be/">BEN</a>, Belgium (W3), <a href="gopher://gopher.gdb.org/77/.INDEX/vector"><strong>Vector</strong></a> at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> and <a href="gopher://virus1.virus.kyoto-u.ac.jp/77/.index/vector.ig/index"><strong>Vector-ig</strong></a> at <a href="http://virus1.virus.kyoto-u.ac.jp/">IVR</a>, Kyoto-U., Japan (Gopher)</dd><dd>* <a href="http://www.bio.cam.ac.uk/seqlogo/logo.cgi"><strong>WebLogo</strong></a> - Sequence Logo Generation at <a href="http://www.bio.cam.ac.uk/">Cambridge U.</a>, UK (W3)</dd></dl><hr />
<p><a name="part2">
<h2>Part 2: Bibliographic, Text and WWW Searches</h2>
<dl><dd>*</dd><dd>*</dd></dl></a></p>
<dl><dd><a href="gopher://probe.nalusda.gov/7waissrc%3A/.plant/.agricola/agidxB.src"><strong>AGRICOLA</strong></a> <strong>!New!</strong> - Bibliographic References (Plant Genome Subset) at <a href="gopher://probe.nalusda.gov/">USDA-NAL</a> (Gopher)</dd><dd>* <a href="http://www-lmmb.ncifcrf.gov/annRev.html"><strong>Annual Reviews</strong></a> <strong>!New!</strong> - Bibliographic Searches at <a href="http://www-lmmb.ncifcrf.gov/">LMMB-National Cancer Institute</a> (W3)</dd><dd>* <a href="http://www.lerc.nasa.gov/Doc/archieplex.html"><strong>ArchiePlexForm</strong></a> - Search Files Available by Anonymous FTP at <a href="http://www.lerc.nasa.gov/">LeRC-NASA</a> (W3)</dd><dd>* <a href="http://www.beckman.com/biorsrch/biorsrch.htm"><strong>Beckman-Bioresearch</strong></a> <strong>!New!</strong> - Information on Protein and DNA Applications, Meetings and Product Information at <a href="http://www.beckman.com/">Beckman Instruments</a> (W3)</dd><dd>* <a href="gopher://exogene.genethon.fr/11/Biblio/Journaux"><strong>BIBLIO</strong></a> - Molbio Journal Searches at <a href="http://www.genethon.fr/genethon_en.html">Genethon</a>, France (Gopher) and <a href="http://nxoc01.cern.ch:8001/net.bio.net/biology-journal-contents?"><strong>Biology Journal Contents</strong></a> at <a href="http://www.cern.ch/">CERN</a>, Switzerland (W3)</dd><dd>* <a href="http://www.bibsys.no/search/pube.html"><strong>BIBSYS</strong></a> <strong>!Recent!</strong> - Interuniversitary Bibliographic System in Norway (W3)</dd><dd>* <a href="gopher://genes.icgeb.trieste.it/77/.indexes/BIOBIB"><strong>BIOBIB</strong></a> - Biocomputing Bibliography at <a href="http://base.icgeb.trieste.it/">ICGEB-Trieste</a>, Italy (Gopher) and <a href="http://nxoc01.cern.ch:8001/wais.funet.fi:210/embnet%2Fcompalgo?"><strong>CompAlgo</strong></a> at <a href="http://www.cern.ch/">CERN</a>, Switzerland (W3)</dd><dd>* <a href="http://www.ebi.ac.uk/biocat/biocat.html"><strong>BioCatalog</strong></a> <strong>!Recent!</strong> - Catalog of Molecular Biology Programs at <a href="http://www.ebi.ac.uk/">EBI</a>, <a href="http://www.genethon.fr/exterieur/bio_catal.html"><strong>Bio-catalogue</strong></a> at <a href="http://www.genethon.fr/genethon_en.html">Genethon</a>, France and <a href="http://cammsg3.caos.kun.nl:8000/srs/srsc?-info+BIOCAT"><strong>BIOCAT</strong></a> <strong>!Recent!</strong> at <a href="http://cammsg3.caos.kun.nl:8000/">CAOS/CAMM</a>, The Netherlands (W3)</dd><dd>* <a href="http://www.public.iastate.edu/~pedro/rt_journals.html"><strong><font color="#810081">Bio/Chemical Journals and Newsletters</font></strong></a> <strong>!New!</strong> - Table of Contents and Abstracts of Different Titles at <a href="http://www.iastate.edu/">Iowa State</a> (W3)</dd><dd>* <a href="http://ibc.wustl.edu:70/1m/bio_remote/bio-email"><strong>Bio-Email</strong></a> - List of Biomedical E-Mail Servers and <a href="http://ibc.wustl.edu:70/7m/bio_remote/bio-emailhttp://ibc.wustl.edu:70/1m/bio_remote/bio-email"><strong>Bio-Email-Search</strong></a> at <a href="http://ibc.wustl.edu/">Washington U.</a> (W3)</dd><dd>* <a href="http://www.ftpt.br/cgi-bin/bioline/bioline"><strong>Bioline</strong></a> - Bio-Publications at <a href="http://www.ftpt.br/">Base de Dados Tropical</a>, Brazil (W3)</dd><dd>* <a href="http://bioinformatics.weizmann.ac.il:70/1s/biomoo"><strong>BioMOO</strong></a> - The Biologists' Virtual Meeting Place at <a href="http://bioinformatics.weizmann.ac.il:70/">Weizmann Institute of Science</a>, Israel (W3)</dd><dd>* <a href="gopher://net.bio.net/77/.wais-sources/biology-journal-contents"><strong>Bionet Journal</strong></a> Articles and <a href="gopher://net.bio.net/77/.wais-sources/biosci"><strong>Bionet News</strong></a> (Gopher)</dd><dd>* <a href="gopher://s-crim1.dl.ac.uk/7waissrc%3a/BIOSCI%20archives"><strong>BIOSCI</strong></a> Archives at <a href="gopher://s-crim1.dl.ac.uk/">EMBnet-UK</a> (Gopher) and <a href="http://nxoc01.cern.ch:8001/net.bio.net/biosci?"><strong>BIOSCI</strong></a> at <a href="http://www.cern.ch/">CERN</a>, Switzerland (W3)</dd><dd>* <a href="gopher://stack.serpukhov.su/11/biotech/"><strong>Biotechnology Abstracts DataBase</strong></a> at <a href="http://www.stack.serpukhov.su/home.html">Stack-Serpukhov</a>, Russia (Gopher)</dd><dd>* <a href="http://www.inform.umd.edu/EdRes/Topic/AgrEnv/Biotech/Bibliographies"><strong>Biotechnology Bibliographies</strong></a> at <a href="http://www.inform.umd.edu/EdRes/Topic/AgrEnv/Biotech">BIC-U. Maryland/College Park</a> (W3)</dd><dd>* <a href="gopher://gopher.gdb.org:3005/7"><strong>BOING</strong></a> - Bio Oriented INternet Gophers at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (Gopher)</dd><dd>* <a href="http://mbisg2.sbc.man.ac.uk/brassp.html"><strong>BRASS</strong></a> - Bioinformatics Resource for Algorithms, Software and Sequences at <a href="http://mbisg2.sbc.man.ac.uk/">U. Manchester</a>, UK (W3)</dd><dd>* <a href="telnet://database.carl.org/"><strong>CARL UnCover</strong></a> - Bibliographic Service from U. Texas (Telnet)</dd><dd>* <a href="gopher://lib-gopher.lib.indiana.edu:7050/11/cciim"><strong>CCIIM</strong></a> <strong>!New!</strong> - Clearinghouse for Chemical Information Instructional Materials at <a href="gopher://lib-gopher.lib.indiana.edu:7050/">Indiana U.</a> (Gopher)</dd><dd>* <a href="gopher://locus.nalusda.gov/7waissrc%3a/.other_bio_gophers/.cris/cris.src"><strong>CRIS</strong></a> - Current Research Information System on Research Grants at <a href="gopher://locus.nalusda.gov/">USDA</a> (Gopher)</dd><dd>* <a href="gopher://weeds.mgh.harvard.edu/1ftp%3aweeds.mgh.harvard.edu%40/pub/codon/"><strong>Codon Usage Tables</strong></a> at Massachusetts General Hospital-<a href="http://golgi.harvard.edu/">Harvard</a> and <a href="gopher://gopher.nih.gov/00/molbio/gencode"><strong>Table of Standard Genetic Code</strong></a> at <a href="http://www.nih.gov/">NIH</a> (Gopher)</dd><dd>* <a href="http://www.gdb.org/Dan/rebase/comp.html"><strong>Companies Selling Restriction Enzymes</strong></a> - Select Companies and Enzymes at <a href="http://www.gdb.org/">John Hopkins</a> (W3)</dd><dd>* <a href="http://hackberry.chem.niu.edu:70/0/ConferenceListings/index.html"><strong>Conference Listings</strong></a> - Search Chemistry, Biology and Medicine Conference Catalogs at <a href="http://hackberry.chem.niu.edu:70/0/webpage.html">Northern Illinois</a> (W3)</dd><dd>* <a href="http://www.dra.com/drewdb"><strong>DataResearch-Demo</strong></a>, <a href="http://www.dra.com/lcauth"><strong>-Authority</strong></a> and <a href="http://www.dra.com/lcmarc"><strong>-LCMARC</strong></a> Databases at Data Research Associates (W3)</dd><dd>* <a href="gopher://biox.embnet.unibas.ch:13020/77/.index/index"><strong>DIBUG</strong></a> - Discover Insight Biosym User Group Mailing List at <a href="gopher://biox.embnet.unibas.ch/">EMBnet-Basel</a>, Switzerland (Gopher)</dd><dd>* <a href="gopher://gopher.slu.se/7waissrc%3a/wais-dbs/Biology/bionic-embl-software"><strong>EMBL-Software</strong></a> - Listing of Software Available from EMBL at <a href="gopher://gopher.slu.se/">U. of Agricultural Sciences</a>, Sweden (Gopher) and <a href="http://www.gdb.org/bio/search/FILT/embl.all.html"><strong>EMBL.ALL-Search</strong></a> at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (W3)</dd><dd>* <a href="http://kufacts.cc.ukans.edu/cwis/units/fgsc/main.html"><strong>FGSC</strong></a> - Fungal Genetics Stock Center Online Catalogue at <a href="http://kufacts.cc.ukans.edu/cwis/kufacts_start.html">U. Kansas</a> (W3)</dd><dd>* <a href="http://www.fisher1.com/Fisher/biotech.html"><strong>FisherBiotech</strong></a> <strong>!New!</strong> - Reagents Catalog with Safety Information at <a href="http://www.fisher1.com/">Fisher Scientific</a> (W3)</dd><dd>* <a href="gopher://gopher.gdb.org/77/.INDEX/gentools"><strong>GenTools</strong></a> at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (Gopher)</dd><dd>* <a href="http://lib-www.ucr.edu/bioag/"><strong>INFOMINE</strong></a> <strong>!Recent!</strong> - Search Biological, Agricultural and Medical Resources at <a href="http://www.ucr.edu/">U. California-Riverside</a> (W3)</dd><dd>* <a href="http://www.chemie.fu-berlin.de/chemistry/index/"><strong>Internet Chemistry Index</strong></a> <strong>!New!</strong> - Chemistry WWW Pages and Services at <a href="http://www.chemie.fu-berlin.de/">FU-Berlin</a> (W3) at</dd><dd>* <a href="gopher://gopher.electriciti.com/11/invitrogen"><strong>Invitrogen</strong></a> - Vector Sequences, Protocols and Product Information (Gopher)</dd><dd>* <a href="gopher://liberty.uc.wlu.edu:3002/7"><strong>Jughead</strong></a> - Gopher Directory Search at <a href="gopher://liberty.uc.wlu.edu/">W&L</a> (Gopher)</dd><dd>* <a href="http://www.cs.monash.edu.au/~lloyd/tildeBIB"><strong>L.Allison Biblio</strong></a> - Collected References in Algorithms, Computing for Molecular Biology, WWW Sites, etc. at <a href="http://www.cs.monash.edu.au/">Monash University</a>, Australia (W3)</dd><dd>* <a href="gopher://gopher.ucsc.edu/7waissrc%3a/.WAIS/Life_Sciences_CD_sources.src"><strong>Life Sciences List of Journals</strong></a> at <a href="gopher://gopher.ucsc.edu/">UCSC</a> (Gopher)</dd><dd>* <a href="http://expasy.hcuge.ch/cgi-bin/experts"><strong>List of On-Line Experts</strong></a> - Contacts of Experts on Different Proteins/Enzymes at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland (W3)</dd><dd>* <a href="http://expasy.hcuge.ch/txt/nomlist.txt"><strong>List of Protein Nomenclature References</strong></a> - References on Protein Nomenclature and Terminology at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland (W3)</dd><dd>* <a href="http://expasy.hcuge.ch/cgi-bin/listdoc"><strong>Listdoc</strong></a> - Amos Bairoch's List Documents Describing Molecular Biology Oriented Services, Software, Email Servers, FTP Sites, etc. at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland (W3)</dd><dd>* <a href="http://www.genome.ad.jp/htbin/bfind_litdb"><strong>LITDB</strong></a> - PRF Protein/Peptide Literature Database at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan (W3)</dd><dd>* <a href="http://ncbi.nlm.nih.gov:2555/r_medline.html"><strong>MEDLINE </strong></a>- Bibliographic References (Subset in Molecular Genetics) of the National Library of Medicine and <a href="http://atlas.nlm.nih.gov:5700/Entrez/index.html"><strong>ENTREZ-MEDLINE Subset</strong></a> <strong>!New!</strong> at <a href="http://www.ncbi.nlm.nih.gov/">NCBI</a> and <a href="http://www.embl-heidelberg.de/srs/srsc?-id||777855676_129.186.4.14||-info||MEDLINE"><strong>MEDLINE</strong></a> at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a>(W3)</dd><dd>* <a href="http://www.gdb.org/Dan/catal/milli-intro.html"><strong>Millipore On-line Catalog</strong></a> at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (W3)</dd><dd>* <a href="gopher://atlas.chem.utah.edu/11/MSDS"><strong>MSDS</strong></a> and <a href="gopher://biochemistry.bioc.cwru.edu/7sc%3a/database/utahmsds.mnu"><strong>MSDS-Search</strong></a> - Material Safety Data Sheets at Utah U., <a href="gopher://isumvs.iastate.edu/1~db.CCINFO2.MSDS"><strong>Fisher Scientific MSDS's</strong></a> at <a href="http://www.cc.iastate.edu/welcome.html">Iowa State</a> and <a href="gopher://genes.icgeb.trieste.it/11/biosafety/lab/mat"><strong>MSDS-Info</strong></a> at <a href="http://base.icgeb.trieste.it/">ICGEB-Trieste</a>, Italy (Gopher)</dd><dd>* <a href="http://www.inform.umd.edu/EdRes/Topic/AgrEnv/Biotech/Miscellaneous_Pubs/meeting.lst"><strong>Meetings/Symposia/Workshopsin Biotechnology </strong></a>at <a href="http://www.inform.umd.edu/EdRes/Topic/AgrEnv/Biotech">BIC-U. Maryland/College Park</a> (W3)</dd><dd>* <a href="http://www.inform.umd.edu/EdRes/Topic/AgrEnv/Biotech/Newsletters"><strong>Newsletters</strong></a> - Newsletters in Biotechnology Issues at <a href="http://www.inform.umd.edu/EdRes/Topic/AgrEnv/Biotech">BIC-U. Maryland/College Park</a> (W3)</dd><dd>* <a href="gopher://stis.nsf.gov/77/.index/wais-sources/nsf-awards"><strong>NSF-Awards</strong></a> - Information on Research Grants at <a href="gopher://stis.nsf.gov/">NSF</a> (Gopher)</dd><dd>* <a href="http://golgi.harvard.edu/journals.html"><strong>On-line Journals</strong></a> at <a href="http://golgi.harvard.edu/">Harvard</a> (W3)</dd><dd>* <a href="http://www.gdb.org/bio/search/FILT/owlref.html"><strong>OWLREF</strong></a> <strong>!New!</strong> - Search the References of OWL (Non-Redundant Protein Database) at <a href="http://www.gdb.org/">John Hopkins</a> (W3)</dd><dd>* <a href="http://sunsite.unc.edu/patents/intropat.html"><strong>Patents</strong></a> <strong>!Recent!</strong> - STO's Internet Patent Search System at <a href="http://sunsite.unc.edu/">SunSITE-USA/UNC-Chapel Hill</a> (W3)</dd><dd>* <a href="http://technical.powells.portland.or.us/search.html"><strong>Powell's Technical Books</strong></a> - Consult Titles and Prices at <a href="http://technical.powells.portland.or.us/">Powell's Technical Bookstore</a> (W3)</dd><dd>* <a href="http://ccinfo.ims.ac.jp/cgi-bin/qcpe"><strong>QCPE</strong></a> - Quantum Chemistry Program Exchange Program Library at <a href="http://ccinfo.ims.ac.jp/">Okazaki National Research Institute</a>, Japan (W3) and <a href="gopher://hackberry.chem.niu.edu/11/Quantum%20Chemistry%20Acronyms%20Database"><strong>Quantum Chemistry Acronyms Database</strong></a> at <a href="gopher://hackberry.chem.niu.edu/">Northern Illinois U.</a>(Gopher)</dd><dd>* <a href="http://biotech.chem.indiana.edu/lib/search.html"><strong>Resource-Search</strong></a> - Search Biotechnology Links at <a href="http://biotech.chem.indiana.edu/">Biotech-Indiana</a> (W3)</dd><dd>* <a href="gopher://ava.bcc.orst.edu/00/mgd/useful_tools/journams.txt"><strong>Scientific Journal Abbreviation</strong></a> at <a href="gopher://ava.bcc.orst.edu/">Oregon State</a> (Gopher)</dd><dd>* <a href="http://expasy.hcuge.ch/sprot/seqanalr.html"><strong>Seqanalref</strong></a> - Sequence Analysis Bibliographic Reference Data Bank at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland and <a href="http://golgi.harvard.edu/htbin/sar-search-cit"><strong>Seqanalref</strong></a> - at <a href="http://golgi.harvard.edu/">Harvard</a> (W3)</dd><dd>* <a href="http://www.gdb.org/Dan/softsearch/softsearch.html"><strong>Softsearch</strong></a> - Search and Retrieve Software and Data starting at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (W3)</dd><dd>* <a href="gopher://morris.lib.udel.edu/11/indexes/toc/springer"><strong>Springer Verlag Journals</strong></a> - Tables of Contents of Different Titles (Gopher)</dd><dd>* <a href="http://ucmp1.berkeley.edu/taxaform.html"><strong>Taxaform</strong></a> <strong>!New!</strong> - Ride the Web Lift to Taxonomy at <a tree="" phylogeny.arizona.edu="" href="http://ucmp1.berkeley.edu/%3EUC-M.%20of%20Paleontology%3C/a%3E%20(W3)%3CDD%3E*%20%3CAHREF="><strong>The Tree of Life</strong></a> <strong>!Recent!</strong> - A Phylogenetic Navigation System for the Internet at <a href="http://www.arizona.edu/">U. Arizona</a> (W3)</dd><dd>* <a href="http://town.hall.org/cgi-bin/srch-patent"><strong>U.S. Patent Database</strong></a> at <a href="http://town.hall.org/">Town Hall</a> (W3)</dd><dd>* <a href="http://patents.cnidr.org/pto/classes.html"><strong>U.S. Patent Classifications</strong></a> - Information on Classification Scheme and Class Definitions including <a href="http://patents.cnidr.org/pto/classes/us/424/424.html"><strong>Class 424 - Drug, Bio-Affecting and Body Treating Compositions</strong></a>, <a href="http://patents.cnidr.org/pto/classes/us/435/435.html"><strong>Class 435 - Chemistry: Molecular Biology and Microbiology</strong></a> and <a href="http://patents.cnidr.org/pto/classes/us/930/930.html"><strong>Class 930 - Peptide or Protein Sequence</strong></a> and <a href="http://patents.cnidr.org/pto/access.html"><strong>AIDS Patents Databases</strong></a> at <a href="http://cnidr.org/welcome.html">CNIDR</a> (W3)</dd><dd>* <a href="gopher://veronica.scs.unr.edu/11/veronica"><strong>Veronica </strong></a>- Search Gopher Files and Directories at <a href="gopher://veronica.scs.unr.edu/">U. Nevada</a> (Gopher)</dd><dd>* <a href="http://www.cc.gatech.edu/gvu/search_engines.html"><strong>W3 Search Engines</strong></a> at <a href="http://www.gatech.edu/">Georgia Tech</a> (W3)</dd><dd>* <a href="http://webcrawler.cs.washington.edu/WebCrawler/WebQuery.html"><strong>WebCrawler</strong></a> <strong>!New!</strong> at <a href="http://www.uwtc.washington.edu/UWHome.html">U. Washington</a> (W3)</dd><dd>* <a href="http://webcrawler.cs.washington.edu/WebCrawler/WebIndexes.html"><strong>WebIndexes</strong></a> <strong>!New!</strong> at <a href="http://www.uwtc.washington.edu/UWHome.html">U. Washington</a> (W3)</dd><dd>* <a href="http://golgi.harvard.edu/htbin/biopages"><strong>WWW VL Biosciences Index</strong></a> - Search Keith Robison's Catalogs at <a href="http://golgi.harvard.edu/">Harvard</a> (W3)</dd><dd>* <a href="http://www.cs.colorado.edu/home/mcbryan/WWWW.html"><strong>WWW Worm</strong></a> at <a href="http://www.cs.colorado.edu/home/capp/index.html">U. Colorado-Boulder</a> (W3)</dd></dl><hr />
<p><a name="part3">
<h2>Part 3: Guides, Tutorials and Help Tools</h2>
<dl><dd>*</dd><dd>*</dd></dl></a></p>
<dl><dd><a href="http://www.chemie.fu-berlin.de/cgi-bin/abbscomp"><strong>Abbreviation of Chemical Compounds</strong></a> at <a href="http://www.chemie.fu-berlin.de/">FU-Berlin</a>, Germany (W3)</dd><dd>* <a href="gopher://info.umd.edu:901/00/inforM/Educational_Resources/AcademicResourcesByTopic/AgricultureEnvironmentResources/Biotechnology_Information_Center/Miscellaneous_Pubs/AG-BIOTECH"><strong>Ag/Biotech Electronic Information Resources</strong></a> at U. Maryland (Gopher)</dd><dd>* <a href="http://www.chemie.fu-berlin.de/chemistry/bio/amino-acids.html"><strong>Amino Acids</strong></a> at <a href="http://www.chemie.fu-berlin.de/">FU-Berlin</a>, Germany (W3)</dd><dd>* <a href="http://www.biochem.ucl.ac.uk/~mcdonald/atlas/"><strong>Atlas of Side-Chain and Main-Chain Hydrogen Bonding</strong></a> <strong>!New!</strong> at <a href="http://www.biochem.ucl.ac.uk/">UCL-London</a>, UK (W3)</dd><dd>* <a href="http://medix.mmi.uct.ac.za/bbhelp/con2.html"><strong>BBHelp</strong></a> <strong>!New!</strong> - Molecular Biology Help at <a href="http://www.uct.ac.za/">U. Cape Town</a>, South Africa (W3)</dd><dd>* <a href="http://www.td.anl.gov/InternetGuide.html"><strong>Big Dummy's Guide to the Internet</strong></a> (W3)</dd><dd>* <a href="http://www.ch.embnet.org/jam/int_unix/JAMINX.HTML"><strong>Biocomputing Survival Guide</strong></a> - A Cookbook for the User of Computers in Molecular Biology at <a href="gopher://biox.embnet.unibas.ch/">EMBnet-Basel</a>, Switzerland (W3)</dd><dd>* <a href="http://bioinformatics.weizmann.ac.il:70/1s/bioguide"><strong>BioGuide</strong></a> - PCR Guide at <a href="http://bioinformatics.weizmann.ac.il:70/">Weizmann Institute of Science</a>, Israel (W3)</dd><dd>* <a href="gopher://lenti.med.umn.edu/11/Biologically%20Related%20Information/Biologist%27s%20Guide%20to%20the%20Internet"><strong>Biologist's Guide to Internet Resources</strong></a> at <a href="http://www.umn.edu/">U. Minnesota</a> (Gopher)</dd><dd>* <a href="gopher://life.anu.edu.au/00/molecular_biology/biosci.FAQ"><strong>BIOSCI/Bionet FAQ</strong></a> at <a href="gopher://life.anu.edu.au/">ANU</a>, Australia (Gopher)</dd><dd>* <a href="http://earth1.epa.gov/biotech_rule/biotech_support/"><strong>Biotech-Support</strong></a> - Decision Documents and Risk Assessments on Different Microorganisms Used by Man at <a href="http://earth1.epa.gov/">EPA</a> (W3)</dd><dd>* <a href="gopher://megasun.bch.umontreal.ca/00/CMB/Help/birch.txt"><strong>BIRCH</strong></a> - Biological Research Computer Hierarchy User's Guide at U. Montreal, Canada (Gopher)</dd><dd>* <a href="gopher://gopher.gdb.org/11/bioftp/book-reviews"><strong>Book Reviews in Biology</strong></a> at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (Gopher)</dd><dd>* <a href="gopher://gopher.csc.fi/00/tiede/kemia/ChemistsGuide"><strong>Chemist's Guide to Network Resources</strong></a> at <a href="http://www.csc.fi/CSC_english.html">CSC</a>, Finland (Gopher)</dd><dd>* <a href="http://www.chemie.fu-berlin.de/chemistry/general/units.html"><strong>Conversion of Units</strong></a> <strong>!New!</strong> at <a href="http://www.chemie.fu-berlin.de/">FU-Berlin</a>, Germany (W3)</dd><dd>* <a href="http://lenti.med.umn.edu/~mwd/cell_www/cell.html"><strong>Course/Tutorial in Cell Biology</strong></a> <strong>!New!</strong> at <a href="http://www.umn.edu/">U. Minnesota</a>, <a href="http://www.cc.emory.edu/EMORY_CLASS/CELL_BIOLOGY/Cell_Biology/Cell_Biology.html"><strong>Course in Cell Biology</strong></a> at <a href="http://www.cc.emory.edu/">Emory U.</a> (W3) and <a href="gopher://brise.ere.umontreal.ca/11/bb/textes/notes"><strong>Course in Cell Biology</strong></a> (in French) at U. Montreal, Canada (Gopher)</dd><dd>* <a href="http://cammsg3.caos.kun.nl:8000/genomics/GDB_OMIM_TOC.html"><strong>Course on GDB and OMIM Access</strong></a> <strong>!New!</strong> at <a href="http://cammsg3.caos.kun.nl:8000/index.html">CAOS/CAMM</a>, The Netherlands (W3)</dd><dd>* <a href="http://turner.lamf.uwindsor.ca/exhibits/courses/59-261/welcome.html"><strong>Course on Organic Chemistry of Biomolecules</strong></a> at U. Windsor, Canada (W3)</dd><dd>* <a href="http://www.cryst.bbk.ac.uk/PPS/index.html"><strong>Course on Principles of Protein Structure</strong></a> <strong>!Recent!</strong> - A Collaborative Virtual Course Organized by the <a href="http://www.dl.ac.uk/CBMT/HOME.html"><strong>Collaborative BioMolecular Tools</strong></a> at <a href="http://www.cryst.bbk.ac.uk/">Birkbeck College-Londen</a>, UK (W3)</dd><dd>* <a href="http://lenti.med.umn.edu/recombinant_dna/recombinant_flowchart.html"><strong>Course on Recombinant DNA Technology</strong></a> at <a href="http://www.umn.edu/">U. Minnesota</a> (W3)</dd><dd>* <a href="gopher://info.umd.edu:901/00/inforM/Educational_Resources/AcademicResourcesByTopic/AgricultureEnvironmentResources/Biotechnology_Information_Center/Miscellaneous_Pubs/dbs-bbs.lst"><strong>Databases Related to Agricultural Biotechnology</strong></a> at U. Maryland (Gopher)</dd><dd>* <a href="http://www.public.iastate.edu/~pedro/dictionaries.html"><strong>Dictionaries</strong></a> at <a href="http://www.cc.iastate.edu/welcome.html">Iowa State</a> (W3)</dd><dd>* <a href="http://130.209.9.190/"><strong>Dictionary of Cell Biology</strong></a> at <a href="http://130.209.9.190/IBLS/IBLS-home.html">IBLS-Glasgow U.</a>, UK (W3)</dd><dd>* <a href="gopher://info.umd.edu:901/00/inforM/Educational_Resources/AcademicResourcesByTopic/AgricultureEnvironmentResources/Biotechnology_Information_Center/Miscellaneous_Pubs/direct.lst"><strong>Directories Related to Agricultural Biotechnology</strong></a> at U. Maryland (Gopher)</dd><dd>* <a href="http://www2.pasteur.fr/~tekaia/GCGdoc/Doc.html"><strong>GCGdoc</strong></a> <strong>!Recent!</strong> - GCG Documentation (V.8) at <a href="http://www.pasteur.fr/">Institut Pasteur</a>, France and <a href="http://titus.u-strasbg.fr/Computer/GCGdoc/DocF.html"><strong>GCGdoc-Français</strong></a> <strong>!Recent!</strong> at <a href="http://titus.u-strasbg.fr/HomePage.html">IGBMC-U. Strasbourg</a>, France (W3)</dd><dd>* <a href="http://sci.wfeb.edu/HELP/@GCGHELP:GENMANUAL"><strong>GCG-GenManual</strong></a> (Analysis Type) and <a href="http://sci.wfeb.edu/HELP/@GCGHELP:GENHELP"><strong>GCG-GenHelp</strong></a> (Program Name) at <a href="http://golgi.harvard.edu/">Harvard</a> (W3)</dd><dd>* <a href="http://geoff.biop.ox.ac.uk/manuals/alscript/alscript.html"><strong>Guide to Alscript</strong></a> at <a href="http://geoff.biop.ox.ac.uk/">U. Oxford</a>, UK (W3)</dd><dd>* <a href="http://www-bio.unizh.ch/sw/swbiosym.html"><strong>Guide to Biosym Software</strong></a> at <a href="http://www-bio.unizh.ch/">U. Zurich</a>, Switzerland (W3)</dd><dd>* <a href="gopher://infomeister.osc.edu:73/00/documents/drug.design.guide"><strong>Guide to Computer-Assisted Drug Design</strong></a> at Computational Chemistry Archives-Ohio (Gopher)</dd><dd>* <a href="http://fconvx.ncifcrf.gov:2001/~toms/delila.html"><strong>Guide to Delila</strong></a> at <a href="http://fconvx.ncifcrf.gov:2001/">NCI-FCRF</a> (W3)</dd><dd>* <a href="gopher://dna.cedb.uwf.edu/11/Miscellaneous/Lab%20Protocols/DNA%20Cloning%20in%20E.coli"><strong>Guide to DNA Cloning in E. coli</strong></a> at UWF (Gopher)</dd><dd>* <a href="http://lenti.med.umn.edu/MolBio_man/MolBio_man.html"><strong>Guide to GCG</strong></a> and AGRENET at <a href="http://www.umn.edu/">U. Minnesota</a> (W3)</dd><dd>* <a href="http://www.chem.duke.edu/research/prisant/protein/protein.html"><strong>Guide to Geometric Aspects of Protein Structure and Function</strong></a> at Duke (W3)</dd><dd>* <a href="gopher://una.hh.lib.umich.edu/00/inetdirsstacks/molbio%3ahayden"><strong>Guide to Molecular Biology Databases</strong></a> at <a href="gopher://una.hh.lib.umich.edu/">U. Michigan</a> (W3)</dd><dd>* <a href="http://www.nih.gov/molecular_modeling/gateway.html"><strong>Guide to Molecular Modeling</strong></a> at <a href="http://www.nih.gov/">NIH</a> (W3)</dd><dd>* <a href="gopher://info.umd.edu:901/00/inforM/Educational_Resources/AcademicResourcesByTopic/AgricultureEnvironmentResources/Biotechnology_Information_Center/Miscellaneous_Pubs/pathfinder.biotech"><strong>Guide to Printed Information Sources in Biotechnology</strong></a> at U. Maryland (Gopher)</dd><dd>* <a href="http://condor.embl-heidelberg.de:2604/check/checks/ProCheck/documentation/"><strong>Guide to ProCheck</strong></a> at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a>, Germany (W3)</dd><dd>* <a href="http://www.cryst.bbk.ac.uk/PPS/vsns-pps/technology/main.html"><strong>Guide to RasMol</strong></a> <strong>!Recent!</strong> (see <a href="ftp://ftp.dcs.ed.ac.uk/pub/rasmol">Source</a>) at <a href="http://www.cryst.bbk.ac.uk/">Birkbeck College-London</a>, UK (W3)</dd><dd>* <a href="http://twod.med.harvard.edu/seqanal/index.html"><strong>Guide to Sequence Search </strong></a>at <a href="http://golgi.harvard.edu/">Harvard</a> (W3)</dd><dd>* <a href="http://www.arc.umn.edu/GVL/Software/xmol/XMol.html"><strong>Guide to XMol</strong></a> at <a href="http://www.umn.edu/">U. Minnesota</a> (W3)</dd><dd>* <a href="http://www.ch.ic.ac.uk/chemical_mime.html"><strong>Hyperactive Molecules Using Chemical MIME</strong></a> - WWW Display of 3D Chemical Information at <a href="http://www.ch.ic.ac.uk/">Imperial College</a>, UK (W3)</dd><dd>* <a href="http://www.chemie.fu-berlin.de/chemistry/general/constants.html"><strong>Fundamental Physical Constants</strong></a> at <a href="http://www.chemie.fu-berlin.de/">FU-Berlin</a>, Germany (W3)</dd><dd>* <a href="gopher://weeds.mgh.harvard.edu/11/dept_molbiol/molbiol/brent/interaction_trap"><strong>Interaction Trap</strong></a> - Method to clone cDNAs of proteins that interact w/ known protein at <a href="http://golgi.harvard.edu/">Harvard</a> (Gopher)</dd><dd>* <a href="http://biotech.chem.indiana.edu/intro2.html"><strong>Introduction to Searching Internet Biotechnology Resources</strong></a> at <a href="http://biotech.chem.indiana.edu/">Biotech-Indiana</a> (W3)</dd><dd>* <a href="gopher://asparagin.cenargen.embrapa.br:71/11/manual"><strong>Manual of Biosafety (UNIDO)</strong></a> at <a href="gopher://asparagin.cenargen.embrapa.br:71/">EMBRAPA</a>, Brazil (Gopher)</dd><dd>* <a href="http://www.uct.ac.za/microbiology/manualin.html"><strong>Manual of Molecular Biology Techniques</strong></a> <strong>!New!</strong> at <a href="http://www.uct.ac.za/">U. Cape Town</a>, South Africa (W3)</dd><dd>* <a href="gopher://ftp.bio.indiana.edu/1m/Molecular-Biology/Materials%2bMethods"><strong>Materials & Methods</strong></a> and <a href="gopher://ftp.bio.indiana.edu/77/.indices/methods"><strong>M&M-Search</strong></a> - Laboratory Protocols at Bio-Indiana (Gopher)</dd><dd>* <a href="gopher://fsuj50.rz.uni-jena.de/11/misc/mathebio"><strong>Mathematics & Biology</strong></a> at <a href="http://www.imb-jena.de/">IMB-Jena</a>, Germany and <a href="gopher://merlot.gdb.org/11/Math-In-Biology/math"><strong>Mathematics & Biology</strong></a> at <a href="gopher://merlot.gdb.org/">John Hopkins</a> (Gopher)</dd><dd>* <a href="http://www.sander.embl-heidelberg.de/modules/"><strong>MODULES in Extracellular Proteins</strong></a> <strong>!New!</strong> at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a>, Germany (W3)</dd><dd>* <a href="http://research.nwfsc.noaa.gov/protocols.html"><strong>Molecular Biology Protocols</strong></a> <strong>!New!</strong> at <a href="http://research.nwfsc.noaa.gov/">NWFSC-NOAA</a> (W3)</dd><dd>* <a href="http://www.leeds.ac.uk/bionet/student/carbohyd/index.htm"><strong>Monosaccharide Browser</strong></a> - Investigate Monosaccharide Structure at <a href="http://www.leeds.ac.uk/">U. Leeds</a>, UK (W3)</dd><dd>* <a href="http://ubu.hahnemann.edu/Heme-Iron/NetWelco.htm"><strong>NetBiochem</strong></a> - Medical Biochemistry Course at U. Utah (W3)</dd><dd>* <a href="http://www.gdb.org/Dan/DOE/intro.html"><strong>Primer on Molecular Genetics</strong></a> at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (W3)</dd><dd>* <a href="gopher://gopher.citi2.fr/11/biolo/dico/dicof"><strong>Molbio French Dictionary</strong></a> and its <a href="gopher://gopher.citi2.fr/11/biolo/dico/dicoa"><strong>English-French</strong></a> Version at CITI2, France (Gopher)</dd><dd>* <a href="http://lenti.med.umn.edu/insitu_pcr/chap-shoot2.fm.html"><strong>PCR <em>in situ</em> (1)</strong></a> and <a href="http://lenti.med.umn.edu/insitu_pcr/chapter3.7/chapter3.7.fm.html"><strong>PCR <em>in situ</em> (2)</strong></a> at <a href="http://www.umn.edu/">U. Minnesota</a> (W3)</dd><dd>* <a href="http://www.cchem.berkeley.edu/Table/index.html"><strong>Periodic Table</strong></a> at <a href="http://www.cchem.berkeley.edu/">Berkeley</a> and <a href="http://www2.shef.ac.uk/chemistry/web-elements/periodic-table.html"><strong>WebElements</strong></a> at <a href="http://www2.shef.ac.uk/">U. Shefield</a>, UK (W3)</dd><dd>* <a href="http://www.public.iastate.edu/~pedro/rasmol.html"><strong>RasmolHELP</strong></a> at <a href="http://www.cc.iastate.edu/welcome.html">Iowa State</a> (W3)</dd><dd>* <a href="http://scsg9.unige.ch/eng/toc.html"><strong>Representation of Molecular Models and Rendering Techniques</strong></a> at <a href="http://www.unige.ch/">Geneva U.</a>, Switzerland (W3)</dd><dd>* <a href="http://www.chemie.fu-berlin.de/chemistry/general/si.html"><strong>SI Units</strong></a> at <a href="http://www.chemie.fu-berlin.de/">FU-Berlin</a>, Germany (W3)</dd><dd>* <a href="http://expasy.hcuge.ch/ch2d/technical-info.html"><strong>Technical information on 2-D PAGE</strong></a> at <a href="http://expasy.hcuge.ch/">ExPASY</a>, Switzerland (W3)</dd><dd>* <a href="http://www.chem.vt.edu/chem-ed/ac-home.html"><strong>Tutorials in Analytical Chemistry</strong></a> at <a href="http://www.chem.vt.edu/">Virginia Tech</a> (W3)</dd><dd>* <a href="http://biomed.nus.sg/HIS/txt/menu/tacmenu.html"><strong>Tutorial in Cytology</strong></a> <strong>!Recent!</strong> at <a href="http://biomed.nus.sg/HIS/HIS.html">NUS-HISTONET</a>, Singapure (W3)</dd><dd>* <a href="http://www.bocklabs.wisc.edu/Tutorial.html"><strong>Tutorials in General Virology</strong></a> at <a href="http://www.bocklabs.wisc.edu/">IMV-U. Wisconsin-Madison</a> (W3)</dd><dd>* <a href="http://www.uct.ac.za/microbiology/virtut1.html"><strong>Tutorial in Molecular Virology</strong></a> <strong>!New!</strong> and <a href="http://medix.mmi.uct.ac.za/~jmoodie/welcome1.html"><strong>Tutorial in Clinical Virology</strong></a> <strong>!New!</strong> at <a href="http://www.uct.ac.za/">U. Cape Town</a>, South Africa (W3)</dd><dd>* <a href="http://www.chem.vt.edu/chem-ed/org-home.html"><strong>Tutorials in Organic Chemistry</strong></a> at <a href="http://www.chem.vt.edu/">Virginia Tech</a> (W3)</dd><dd>* <a href="http://www-wilson.ucsd.edu/education/samplegateway.html"><strong>Tutorials in Physical Chemistry</strong></a> <strong>!New!</strong> at <a href="http://www.ucsd.edu/">UC-San Diego</a> and <a href="http://www.chem.vt.edu/chem-ed/pchem-home.html"><strong>Tutorials in Physical Chemistry</strong></a> at <a href="http://www.chem.vt.edu/">Virginia Tech</a> (W3)</dd><dd>* <a href="http://smaug.ucr.edu/Unixhelp/TOP_.html"><strong>UNIXhelp</strong></a> for Users and <a href="http://pelican.cl.cam.ac.uk/htbin/man"><strong>UNIX Manual Pages</strong></a> (W3)</dd><dd>* <a href="http://www.ch.embnet.org/bio-www/archive/florianW3_1.html"><strong>WWW Introduction</strong></a> <strong>!Recent!</strong> at <a href="http://www.ch.embnet.org/">EMBNet-Basel</a>, Switzerland (W3)</dd></dl>
<p><a href="gopher://gopher.imb-jena.de/00/ftp/images/PROTEINS/amino_acids/amino_acid.txt"><strong>AA-Notations and Properties</strong></a> and <a href="gopher://gopher.imb-jena.de/11/ftp/images/PROTEINS/amino_acids"><strong>AA-Images with Atomic Numbering</strong></a> at <a href="http://www.imb-jena.de/">IMB-Jena</a>, Germany (Gopher) <a href="http://www.genome.ad.jp/htbin/bfind_aaindex"><strong>AA-Index</strong></a> - Amino Acid Index Database at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan and <a href="http://cammsg3.caos.kun.nl:8000/srs/srsc?-info+NAKAI"><strong>NAKAI</strong></a> <strong>!Recent!</strong> at<a href="http://cammsg3.caos.kun.nl:8000/">CAOS/CAMM</a>, The Netherlands (W3)</p>
<h2>Part 1: Molecular Biology Search and Analysis</h2>
<dl><dd>* <a href="http://www.embl-heidelberg.de/srs/srsc?-info||ALI"><strong><font color="#810081">3D-ALI</font></strong></a> - Database relating Proteins Structures and Sequences (see <a href="gopher://s-crim1.dl.ac.uk/00/EMBnet%20Bioinformation%20Resource%20UK/Data%20%26%20Software/databases/3d_ali/3d_ali.doc"><strong>Documentation</strong></a>) at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/aaa.html"><font color="#810081"><strong>AA Analysis</strong> </font></a><strong>!Recent!</strong> - Protein Identification in SwissProt and PIR using Amino Acid Composition at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* [[AA Composition]] - Protein Identification in SwissProt using Amino Acid Composition at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland (W3)</dd><dd>* <a href="http://expasy.hcuge.ch/ch2d/aasym0.html"><strong>AA Similarity</strong></a> - Compare the Amino Acid Composition of a SwissProt Entry with Other Entries at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland (W3)</dd><dd>* <a href="http://genome.eerie.fr/fasta/align-query.html"><strong>ALIGN</strong></a> <strong>!Recent!</strong> - Optimal Global Alignment of Two Sequences with No Short-cuts at <a href="http://genome.eerie.fr/home.html">EERIE-Nimes</a>, France (W3)</dd><dd>* <a href="http://cbrg.inf.ethz.ch/subsection3_1_1.html"><strong>AllAll</strong></a> - Relationships in a Set of Related Peptides at <a href="http://cbrg.inf.ethz.ch/">ETH-Zürich</a>, Switzerland (W3)</dd><dd>* <a href="http://cbrg.inf.ethz.ch/subsection3_1_2.html"><strong>AllAllDB</strong></a> - Search the All-Against-All Database of SwissProt at <a href="http://cbrg.inf.ethz.ch/">ETH-Zürich</a>, Switzerland (W3)</dd><dd>* <a href="http://geoff.biop.ox.ac.uk/servers/amas_server.html"><strong>AMAS</strong></a> - Analysis of Protein Multiple Sequence Alignments at <a href="http://geoff.biop.ox.ac.uk/">U. Oxford</a>, UK (W3)</dd><dd>* <a href="http://genome.eerie.fr/gcg/bactranslate-query.html"><strong>Backtranslate</strong></a> <strong>!Recent!</strong> - Translate a Protein Sequence back to a Nucleotide Sequence at <a href="http://genome.eerie.fr/home.html">EERIE-Nimes</a>, France (W3)</dd><dd>* <a href="http://kiwi.imgen.bcm.tmc.edu:8088/search-launcher/launcher.html"><strong>BCM Search Launcher</strong></a> <strong>!New!</strong> at <a srs="" href="http://www.bcm.tmc.edu/%3EBaylor%20College%20of%20Medicine%3C/a%3E%20(W3)%3CDD%3E*%20%3Cahref="><strong>BERLIN</strong></a> <strong>!Recent!</strong> - RNA Databank of 5S rRNA and 5S rRNA Gene Sequences at <a href="http://cammsg3.caos.kun.nl:8000/">CAOS/CAMM</a>, The Netherlands (W3)</dd><dd>* <a href="ftp://pdb.pdb.bnl.gov/user_group/biological_units"><strong>Biological Units</strong></a> - Expanded PDB Entries with Full Biological Units at <a href="http://suntid.bnl.gov:8080/bnl.html">Brookhaven National Laboratory</a> (FTP)</dd><dd>* <a href="http://www.molbiol.ox.ac.uk/www/ewan/palette.html"><strong>Biologist's Search Palette</strong></a> - Collection of Search Engines for Biological Databases at <a href="http://www.molbiol.ox.ac.uk/">Oxford U.</a>, UK (W3)</dd><dd>* <a href="http://genome.cs.unc.edu/online.html"><strong>BioSCAN</strong></a> <strong>!New!</strong> - Biological Sequence Comparative Analysis at <a href="http://genome.cs.unc.edu/">U. North Caroline</a> (W3)</dd><dd>* <a href="http://ibm4.carb.nist.gov:4400/bmcd/bmcd.html"><strong>BMCD</strong></a> <strong>!New!</strong> - Biological Macromolecule Crystallization Database at <a href="http://ibm4.carb.nist.gov:4400/carb.html">CARB</a> (W3)</dd><dd>* <a href="http://www.ncbi.nlm.nih.gov/Recipon/bs_seq.html"><strong>BLAST</strong></a> - Basic Local Alignment Research Tool at <a href="http://www.ncbi.nlm.nih.gov/">NCBI</a>, <a href="http://www.genome.ad.jp/SIT/BLAST.html"><strong>BLAST</strong></a> <strong>!Recent!</strong> at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan, <a href="http://genome.eerie.fr/blast/blast-query.html"><strong>BLAST</strong></a> <strong>!Recent!</strong> at <a href="http://genome.eerie.fr/home.html">EERIE-Nimes</a>, France and <a href="http://www.crihan.fr/www/blast.html"><strong>BLAST</strong></a> <strong>!New!</strong> at <a href="http://www.crihan.fr/">CRIHAN</a>, France (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/searches/blitz_input.html"><strong>BLITZ</strong></a> (see <a href="http://www.ebi.ac.uk/searches/blitz_doc.html"><strong>Documentation</strong></a>) at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> and <a href="http://www.ebi.ac.uk/searches/blitz_input.html"><strong>BLITZ</strong></a> at <a href="http://www.ebi.ac.uk/">EBI</a>, UK (W3)</dd><dd>* <a href="http://www.blocks.fhcrc.org/"><strong>BLOCKS</strong></a> - Database of Highly Conserved Regions in Proteins (W3) and <a href="gopher://klaatu.fhcrc.org/77/.indexes/.blocksindex/blocksindex"><strong>BLOCKS-WAIS</strong></a> (Gopher) at <a href="gopher://klaatu.fhcrc.org/">Fred Hutchinson Cancer Research Center</a>, <a href="http://www.embl-heidelberg.de/srs/srsc?-info||BLOCKS"><strong>BLOCKS</strong></a> at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> and<a href="http://www.public.iastate.edu/~pedro/blocks_query.html"><strong>BLOCKS-Search</strong></a> w/ search from <a href="http://www.cc.iastate.edu/welcome.html">Iowa State</a> (W3)</dd><dd>* <a href="http://www.biochem.ucl.ac.uk/bsm/cath/CATHintro.html"><strong>CATH</strong></a> <strong>!New!</strong> - Protein Structure Classification at <a href="http://www.biochem.ucl.ac.uk/">UCL-London</a>, UK (W3)</dd><dd>* <a href="http://alces.med.umn.edu/cuse.html"><strong>Codon Usage</strong></a> - Analysis of Different ORFs in a Gene Sequence at <a href="http://www.umn.edu/">U. Minnesota</a> (W3)</dd><dd>* <a href="http://ben.vub.ac.be/srs/srsc?-info+CPGISLE"><strong>CpGIsle</strong></a> <strong>!Recent!</strong> - CpG Islands Database at <a href="http://ben.vub.ac.be/">BEN</a>, Belgium (W3)</dd><dd>* <a href="http://cbrg.inf.ethz.ch/subsection3_1_7.html"><strong>Darwin</strong></a> - Data Analysis and Retrieval With Indexed Nucleotide/Peptide Sequences at <a href="http://cbrg.inf.ethz.ch/">ETH-Zürich</a>, Switzerland (W3)</dd><dd>* <a href="http://www.ncbi.nlm.nih.gov/dbEST/index.html"><strong>dbEST</strong></a> - Database of Expressed Sequence Tags at <a href="http://www.ncbi.nlm.nih.gov/">NCBI</a> (W3)</dd><dd>* <a href="http://www.genome.ad.jp/dbget/dbget.html"><strong>DBGET</strong></a> - Integrated Database Retrieval System (w/ <a href="http://www.genome.ad.jp/dbget/dbget.links.html"><strong>diagram links</strong></a>) at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan (W3)</dd><dd>* <a href="gopher://gopher.nig.ac.jp/7waissrc%3a/DDBJ_Gopher_WAIS/DNA_seq_index_search.src"><strong>DDBJ</strong></a> - DNA Database of Japan at <a href="http://www.nig.ac.jp/">National Institute of Genetics</a>, Japan (Gopher)</dd><dd>* <a href="http://alces.med.umn.edu/rawdot.html"><strong>Dot Plot</strong></a> - Compare a DNA Sequence with Itself at <a href="http://www.umn.edu/">U. Minnesota</a> (W3)</dd><dd>* <a href="http://www.nih.gov/molecular_modeling/drugbank.html"><strong>DrugBank</strong></a> <strong>!New!</strong> - Three-dimensional Drug Structure Databank at <a href="http://www.nih.gov/">NIH</a> (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/srs/srsc?-info+DSSP"><strong>DSSP</strong></a> <strong>!New!</strong> - Database of Secondary Structure of Proteins from PDB (see <a href="http://www.sander.embl-heidelberg.de/dssp/descrip.html"><strong>Documentation</strong></a>) at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://www.gdb.org/Dan/proteins/ec-enzyme.html"><strong>EC Enzyme</strong></a> at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> and <a href="http://www.genome.ad.jp/htbin/show_ECtable"><strong>EC Number Table</strong></a> at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan and <a href="http://specter.dcrt.nih.gov:8004/Enzymes/enzymes.html"><strong>GenoBase Enzyme Index</strong></a> at <a href="http://www.nih.gov/">NIH</a> (W3)</dd><dd>* <a href="gopher://biox.embnet.unibas.ch:13021/77/.index/embl/index"><strong>EMBL</strong></a> - Nucleotide Sequence Database and <a href="gopher://biox.embnet.unibas.ch:13021/77/.index/xembl/index"><strong>EMBL-New Entries</strong></a> at <a href="http://www.ch.embnet.org/">EMBnet-Basel</a> (Gopher)</dd><dd>* <a href="http://www.ebi.ac.uk/srs/srsc?-info||EMNEW"><strong>EMNEW</strong></a> - Index of New EMBL Sequences at <a href="http://www.ebi.ac.uk/">EBI</a>, UK (W3)</dd><dd>* <a href="http://specter.dcrt.nih.gov:8004/Compound/compound_toc_by_name.html"><strong>EMP Compound</strong></a> and <a href="http://specter.dcrt.nih.gov:8004/Pathway/pathway_toc_by_name.html"><strong>EMP Pathways</strong></a> - Selkov Enzyme and Metabolic Pathway (EMP) Database at <a href="http://www.nih.gov/">NIH</a> (W3)</dd><dd>* <a href="http://www.mcs.anl.gov/home/compbio/pathways/pathways.html"><strong>EMP Metabolic Pathways</strong></a> - Navigation in Metabolic Pathways from <a href="http://www.mcs.anl.gov/home/compbio/default.html">MCS-Computational Biology</a> at <a href="http://www.anl.gov/">Argonne National Laboratory</a> (W3)</dd><dd>* <a href="http://www.ncbi.nlm.nih.gov/Search/Entrez/index.html"><strong>ENTREZ</strong></a> - Protein and Nucleotide Database (see <a href="http://atlas.nlm.nih.gov:5700/WWW2/WWW2_paper2.html"><strong>Documentation</strong></a>) at <a href="http://www.ncbi.nlm.nih.gov/">NCBI</a> (W3)</dd><dd>* <a href="http://expasy.hcuge.ch/sprot/enzyme.html"><strong>ENZYME</strong></a> - The Enzyme Data Bank at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/srs/srsc?-id||781260221_129.186.4.14||-info||EPD"><strong>EPD</strong></a> - Eucaryotic Promoter Database at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a>, Germany and <a href="http://www.genome.ad.jp/htbin/bfind_epd"><strong>EPD</strong></a> <strong>!New!</strong> at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan (W3)</dd><dd>* <a href="http://bioslave.uio.no:8001/srs/srsc?-info+EPO"><strong>EPO</strong></a> <strong>!New!</strong> - European Patent Office Nucleotide Database at <a href="http://www.no.embnet.org/">BiO/U. Oslo</a>, Norway (W3) and <a href="gopher://gopher.csc.fi/7waissrc%3a/tiede/BioBox/bionic/.epo.src"><strong>EPO</strong></a> at <a href="http://www.csc.fi/CSC_english.html">CSC</a>, Finland (Gopher)</dd><dd>* <a href="http://www.ebi.ac.uk/searches/fasta.html"><strong>FASTA</strong></a> - Compare a Nucleic Acid Sequence to Nucleotide Sequence Databases (w/ updates) at <a href="http://www.ebi.ac.uk/">EBI</a>, UK, <a href="http://genome.eerie.fr/fasta/fasta-query.html"><strong>FASTA</strong></a> <strong>!Recent!</strong> at <a href="http://genome.eerie.fr/home.html">EERIE-Nimes</a>, France and <a href="http://www.crihan.fr/www/fasta.html"><strong>FASTA</strong></a> <strong>!New!</strong> at <a href="http://www.crihan.fr/">CRIHAN</a>, France (W3)</dd><dd>* <a href="http://morgan.harvard.edu/"><strong>FlyBase</strong></a> <strong>!New!</strong> - Genetic and Molecular Database for <em>Drosophila</em> at <a href="http://www.harvard.edu/">Harvard U.</a> (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/srs/srsc?-info||FSSP"><strong>FSSP</strong></a> - Database of Families of Structurally Similar Proteins derived from PDB at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://www.abc.hu/blast.html"><strong>FTHOM</strong></a> <strong>!Recent!</strong> - Compare Protein Domain Homology at <a href="http://www.abc.hu/">ABC</a>, Hungary (W3)</dd><dd>* <a href="http://gdbwww.gdb.org/"><strong>GDB</strong></a> - Human Genome Data Base at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (W3)</dd><dd>* <a href="http://ncbi.nlm.nih.gov:2555/r_genbank2.html"><strong>GenBank Database</strong></a> (+Updates) at <a href="http://www.ncbi.nlm.nih.gov/">NCBI</a> and <a href="http://ibc.wustl.edu/wu_fetch.html"><strong>GenBank-Fetch</strong></a> at <a href="http://ibc.wustl.edu/">Washington U.</a> (W3)</dd><dd>* <a href="http://dot.imgen.bcm.tmc.edu:9331/gene-finder/gf.html"><strong>Gene Finder</strong></a> <strong>!New!</strong> - Predict Gene Structure, Internal Exons and Splicing Sites in DNA and Exon-Exon Junstion in cDNA at <a href="http://www.bcm.tmc.edu/%3EBaylor%20College%20of%20Medicine%3C/a%3E%20(W3)%3CDD%3E*%20%3Ca%20href="><strong>GenoBase</strong></a> at <a href="http://www.nih.gov/">NIH</a> (W3)</dd><dd>* <a href="http://genome.eerie.fr/Genome-DBS.html"><strong>Genome Databases</strong></a> <strong>!Recent!</strong> and <a href="http://genome.eerie.fr/Genome_Centre.html"><strong>Genome Centers</strong></a> <strong>!Recent!</strong> - World Wide Links at <a href="http://genome.eerie.fr/">EERIE-Nimes</a>, France (W3)</dd><dd>* <a href="http://www.ri.bbsrc.ac.uk/genome_workstation/workstation.html"><strong>Genome Workstation</strong></a> <strong>!New!</strong> - Genome Related Links at <a href="http://www.ri.bbsrc.ac.uk/">Roslin Institute</a>, UK (W3)</dd><dd>* <a href="http://biotech.chem.indiana.edu/WebChris/maps.html"><strong>Genomic Maps</strong></a> - Links to Genome Specific Resources at <a href="http://biotech.chem.indiana.edu/">Biotech-Indiana</a> (W3)</dd><dd>* <a href="http://www.gdb.org/Dan/gq/gq.form.html"><strong>GenQuest</strong></a> - Search Against Protein Databases with the Q server at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (W3)</dd><dd>* <a href="http://avalon.epm.ornl.gov/Grail-bin/EmptyGrailForm"><strong>Grail</strong></a> <strong>!New!</strong> - Analysis of the Protein Coding Potential of a DNA Sequence (see <a href="ftp://arthur.epm.ornl.gov/pub/xgrail/Manual.grail-genquest.July94"><strong>Documentation</strong></a>) at <a href="http://avalon.epm.ornl.gov/">ORNL</a> (W3)</dd><dd>* <a href="http://www.ncgr.org/gsdb/"><strong>GSDB</strong></a> - Genome Sequence Database at <a href="http://www.ncgr.org/ncgr/ncgr.html">NCGR</a> (W3)</dd><dd>* <a href="http://expasy.hcuge.ch/www/guess-prot.html"><strong>GuessProt</strong></a> - Selects SwissProt proteins given pI and Mw at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland (W3)</dd><dd>* <a href="http://ibc.wustl.edu/hhs/"><strong>HHS</strong></a> - SwissProt and PDB Systematic Sequence Classification Database at <a href="http://ibc.wustl.edu/">Washington U.</a> (W3)</dd><dd>* <a href="http://cammsg3.caos.kun.nl:8000/srs/srsc?-info+HOVERGEN"><strong>HOVERGEN</strong></a> <strong>!Recent!</strong> - Database of Homologous Vertebrate Genes at <a href="http://cammsg3.caos.kun.nl:8000/">CAOS/CAMM</a>, The Netherlands (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/srs/srsc?-info||HSSP"><strong>HSSP</strong></a> - Database of Homology-Derived Structures of Proteins based on PDB and SwissProt at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="gopher://gopher.gdb.org/77/.INDEX/kabat"><strong>Kabat </strong></a>- Database of Proteins of Immunological Interest at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (Gopher)</dd><dd>* <a href="http://www.prosci.uci.edu/kinemages/KinemageIndex.html"><strong>Kinemage-Index</strong></a> - "Kinetical Images" by Protein Type at <a href="http://www.prosci.uci.edu/">Protein Science</a> (W3)</dd><dd>* <a href="http://ibc.wustl.edu/klotho/"><strong>Klotho</strong></a> - Biochemical Compounds Declarative Database at <a href="http://ibc.wustl.edu/">Washington U.</a> (W3)</dd><dd>* <a href="http://genome.eerie.fr/fasta/lalign-query.html"><strong>LALIGN</strong></a> <strong>!Recent!</strong> - Calculates the N-Best Local Alignments Between Two Sequences at <a href="http://genome.eerie.fr/home.html">EERIE-Nimes</a>, France (W3)</dd><dd>* <a href="http://genome.eerie.fr/fasta/lfasta-query.html"><strong>LFASTA</strong></a> <strong>!Recent!</strong> - Local Similarity Searches Between Two Sequences Showing Local Alignments at <a href="http://genome.eerie.fr/home.html">EERIE-Nimes</a>, France (W3)</dd><dd>* <a href="http://www.genome.ad.jp/htbin/bfind_ligand"><strong>LIGAND</strong></a> - Ligand Chemical Database for Enzyme Reactions at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan (W3)</dd><dd>* <a href="gopher://gopher.nih.gov/77/gopherlib/indices/limb/index"><strong>LiMB</strong></a> - Listing of Molecular Biology Databases at <a href="http://www.nih.gov/">NIH</a> (Gopher) and <a href="http://www.embl-heidelberg.de/srs/srsc?-id||777855676_129.186.4.14||-info||LIMB"><strong>LiMB</strong></a> at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://genome.eerie.fr/gcg/map-query.html"><strong>Map</strong></a> <strong>!Recent!</strong> - Restriction Analysis and Translation of a DNA Sequence at <a href="http://genome.eerie.fr/home.html">EERIE-Nimes</a>, France (W3)</dd><dd>* <a href="http://cbrg.inf.ethz.ch/subsection3_1_3.html"><strong>MassSearch</strong></a> - Search SwissProt or EMBL Databases by Protein Mass After Digestion at <a href="http://cbrg.inf.ethz.ch/">ETH-Zürich</a>, Switzerland (W3)</dd><dd>* <a href="http://cgsc.biology.yale.edu/metab.html"><strong>Metabolic Database</strong></a> <strong>!Recent!</strong> - Metabolic Reactions and Pathways at <a href="http://cgsc.biology.yale.edu/">CGSC-Yale U.</a> and <a href="http://moulon.inra.fr/cgi-bin/nph-acedb3.1/acedb/metabolisme?find+Reaction_or_pathway%3By+14+69"><strong>Metabolic Database</strong></a> <strong>!Recent!</strong> at <a href="http://moulon.inra.fr/">INRA-Moulon</a>, France (W3)</dd><dd>* <a href="http://www.informatics.jax.org/mgd.html"><strong>MGD</strong></a> - Mouse Genome Database at <a href="http://www.informatics.jax.org/">Jackson Laboratory</a> (W3)</dd><dd>* <a href="gopher://wehil.wehi.edu.au/11/MHCPEP.DB"><strong>MHCPEP</strong></a> - Database of Major Histocompatibility Complex (MHC) Binding Peptides at <a href="http://www.wehi.edu.au/">WEHI-Melbourne</a>, Australia (Gopher)</dd><dd>* <a href="http://www.nih.gov/htbin/pdb"><strong>Molecules R US</strong></a> - Interactive Text and Images of PDB Files at <a href="http://www.nih.gov/">NIH</a> (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/srs/srsc?-id||777855676_129.186.4.14||-info||MOLPROBE"><strong>MPBD</strong></a> - Molecular Probe Data Base at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3) and <a href="gopher://gopher.slu.se/7waissrc%3a/wais-dbs/Biology/Oligos"><strong>MPDB</strong></a> at <a href="gopher://gopher.slu.se/">U. Agricultural Sciences</a>, Sweeden (Gopher)</dd><dd>* <a href="http://cuhhca.hhmi.columbia.edu/moose/"><strong>MOOSE</strong></a> <strong>!New!</strong> - Macromolecular Object Oriented Search Engine to Extract PDB Contained Information at <a href="http://cuhhca.hhmi.columbia.edu/">Columbia U.</a> (W3)</dd><dd>* <a href="http://ibc.wustl.edu/msa.html"><strong>MSA</strong></a> - Multiple Sequence Alignment at <a href="http://ibc.wustl.edu/">Washington U.</a> (W3)</dd><dd>* <a href="http://www.genome.ad.jp/SIT/MOTIF.html"><strong>MOTIF</strong></a> <strong>!Recent!</strong> - Search Patterns in Protein Sequences at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan <a href="http://www.public.iastate.edu/~pedro/motif_query.html"><strong>Motif</strong></a> at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan w/ search from <a href="http://www.cc.iastate.edu/welcome.html">Iowa State</a> (W3)</dd><dd>* <a href="http://ndbserver.rutgers.edu/"><strong>NDB</strong></a> - Nucleic Acid Database at Rutgers U. (W3)</dd><dd>* <a href="http://www.public.iastate.edu/~pedro/nnpredict_query.html"><strong>nnPredict</strong></a> - Predict Protein Secondary Structure at <a href="http://wormworld.ucsf.edu/">UCSF</a> w/ search from <a href="http://www.cc.iastate.edu/welcome.html">Iowa State</a> (W3)</dd><dd>* <a href="http://www.gdb.org/Dan/proteins/nrl3d.html"><strong>NRL_3D</strong></a> - Sequence/Structure Database derived from PDB at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> and <a href="http://www.embl-heidelberg.de/srs/srsc?-info||NRL3D"><strong>NRL_3D</strong></a> at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://ddbjs4h.genes.nig.ac.jp/"><strong>NRSub</strong></a> <strong>!New!</strong> - A Non-Redundant DNA Sequence Database for <em>Bacillus subtilis</em> at <a href="http://www.nig.ac.jp/">National Institute of Genetics</a>, Japan (W3)</dd><dd>* <a href="http://cbrg.inf.ethz.ch/subsection3_1_4.html"><strong>NuclPepSearch</strong></a> - Search SwissProt for a Nucletide Sequence at <a href="http://cbrg.inf.ethz.ch/">ETH-Zürich</a>, Switzerland (W3)</dd><dd>* <a href="http://gdbwww.gdb.org/omimdoc/omimtop.html"><strong>OMIM</strong></a> - Online Mendelian Inheritance in Man at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (W3)</dd><dd>* <a href="gopher://megasun.bch.umontreal.ca/11/Organelles/Genomes"><strong>Organelle Genome</strong></a> <strong>!New!</strong> - A Sequence Database at <a href="gopher://megasun.bch.umontreal.ca/">U. Montreal</a> (Gopher)</dd><dd>* <a href="http://biotech.chem.indiana.edu/lib/orgstrain.html"><strong>Organisms and Strains</strong></a> - Links to Databases Specific to Organism and Cell Collections at <a href="http://biotech.chem.indiana.edu/">Biotech-Indiana</a> (W3)</dd><dd>* <a href="http://www.gdb.org/Dan/proteins/owl.html"><strong>OWL</strong></a> - Non-Redundant Protein Sequence Database (Updated Daily) at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (W3)</dd><dd>* <a href="http://www-pdd.ncifcrf.gov/PDD/GEN-docs/indexGEN.html"><strong>PDD</strong></a> <strong>!New!</strong> - Protein Disease Database at <a href="http://www-pdd.ncifcrf.gov/">NIMH-NCI</a> (W3)</dd><dd>* <a href="http://bach.pdb.bnl.gov:4148/cgi-bin/browse"><strong>PDB-Browser</strong></a>, <a href="gopher://pdb.pdb.bnl.gov/77/xfullindex/full"><strong>PDB-Index</strong></a> and <a href="gopher://pdb.pdb.bnl.gov/77/xstatusindex/status"><strong>PDB-Pending</strong></a> - <a href="http://www.pdb.bnl.gov/">Protein Data Bank</a> Structures at <a href="http://suntid.bnl.gov:8080/bnl.html">Brookhaven National Laboratory</a>, <a href="http://www.genome.ad.jp/htbin/bfind_pdb"><strong>PDB</strong></a> at <a href="http://www.genome.ad.jp/">GenomeNet</a> Japan, <a href="http://www.ibf.unige.it/7/sci/.PDB/pdbsearch"><strong>PDB</strong></a> at <a href="http://www.ibf.unige.it/">U. Genova</a>, Italy, <a href="http://www.ucmb.ulb.ac.be/pdb_seq_rel_jan94"><strong>PDB-List</strong></a> and <a href="http://www.ucmb.ulb.ac.be/pdb_annot_jan94"><strong>PDB-Annotated</strong></a> at <a href="http://www.ucmb.ulb.ac.be/index.html">Brussels Free U.</a>, Belgium and <a href="http://www.sander.embl-heidelberg.de/pdbsel/explanation.html"><strong>PDB-Select</strong></a> at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://www.nih.gov/molecular_modeling/pdb_at_a_glance.html"><strong>PDB At A Glance</strong></a> - Hierarchic Access to PDB Files at <a href="http://www.nih.gov/">NIH</a> (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/srs/srsc?-id||781260221_129.186.4.14||-info||PDBFINDER"><strong>PDBFINDER</strong></a> - A Database Containing PDB, DSSP and HSSP Information (see <a href="http://www.sander.embl-heidelberg.de/pdbfinder/overview.html"><strong>Documentation</strong></a>) at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://www.genome.ad.jp/htbin/bfind_pdbstr"><strong>PDBSTR</strong></a> - Re-organized Protein Data Bank at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan (W3)</dd><dd>* <a href="http://cbrg.inf.ethz.ch/subsection3_1_5.html"><strong>PepPepSearch</strong></a> - Search SwissProt for a Peptide Sequence at <a href="http://cbrg.inf.ethz.ch/">ETH-Zürich</a>, Switzerland (W3)</dd><dd>* <a href="http://www.public.iastate.edu/~pedro/pprotein_query.html"><strong>PHD</strong></a> - Predict Protein Secondary Structure at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> w/ search from <a href="http://www.cc.iastate.edu/welcome.html">Iowa State</a> (W3)</dd><dd>* <a href="http://www.pasteur.fr/sas/phy/boot-sub.html"><strong>PHILIP-Bootstrapping Analysis</strong></a> <strong>!Recent!</strong> - Divergence Between Protein or Nucleotide Sequences at <a href="http://www.pasteur.fr/">Institut Pasteur</a>, France (W3)</dd><dd>* <a href="http://genome.eerie.fr/gcg/phospepsort-query.html"><strong>Phospepsort</strong></a> <strong>!New!</strong> - Digest Phosphorylated Peptide Sequences at <a href="http://genome.eerie.fr/home.html">EERIE-Nimes</a>, France (W3)</dd><dd>* <a href="http://expasy.hcuge.ch/ch2d/pi_tool.html"><strong>pI/Mw</strong></a> - Compute the Theoretical pI and Molecular Weight of a Protein Sequence at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland (W3)</dd><dd>* <a href="http://genome.eerie.fr/gcg/pileup-query.html"><strong>Pileup</strong></a> <strong>!Recent!</strong> - Align Protein or Nucleotide Sequences at <a href="http://genome.eerie.fr/home.html">EERIE-Nimes</a>, France (W3)</dd><dd>* <a href="http://www.gdb.org/Dan/proteins/pir.html"><strong>PIR</strong></a> - Protein Identification Resource Database at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/srs/srsc?-info||PIRALN"><strong>PIRALN</strong></a> - Database of Sequence Alignments based on PIR at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://www.genome.ad.jp/htbin/bfind_pmd"><strong>PMD</strong></a> - Protein Mutant Database at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan and <a href="http://www.embl-heidelberg.de/srs/srsc?-info||PMD"><strong>PMD</strong></a> at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://alces.med.umn.edu/pmotif.html"><strong>PMOTIF</strong></a> - Search Protein Motifs in Gene Sequence at <a href="http://www.umn.edu/">U. Minnesota</a> (W3)</dd><dd>* <a href="http://www.biophys.uni-duesseldorf.de/service/polandform.html"><strong>Poland</strong></a> - Calculate the Thermal Denaturation Profile of Double Stranded RNA or DNA at <a href="http://www.biophys.uni-duesseldorf.de/">Uni-Düsseldorf</a>, Germany (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/predictprotein/predictprotein.html"><strong>PredictProtein</strong></a> <strong>!Recent!</strong> - Predict Protein Secondary Structure at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://www.genome.ad.jp/htbin/bfind_prf"><strong>PRF</strong></a> - Protein Research Foundation Sequence Database at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan (W3)</dd><dd>* <a href="http://alces.med.umn.edu/rawprimer.html"><strong>Primer Selection</strong></a> - Select Primers in a Gene Sequence at <a href="http://www.umn.edu/">U. Minnesota</a> (W3)</dd><dd>* <a href="http://www.ch.embnet.org/srs/srsc?-info+PRINTS"><strong>PRINTS</strong></a> <strong>!Recent!</strong> - Protein Motif Fingerprints Database (see <a href="file://gopher.embl-heidelberg.de/pub/databases/prints/prints.doc"><strong>Documentation</strong></a>) at <a href="http://www.ch.embnet.org/">EMBnet-Basel</a>, Switzerland (W3)</dd><dd>* <a href="http://www.sanger.ac.uk/~esr/prodom.html"><strong>ProDom</strong></a> - A Protein Domain Database and <a href="http://www.sanger.ac.uk/~esr/prodom-blast.html"><strong>ProDom-Search</strong></a> at <a href="http://www.sanger.ac.uk/">Sanger Centre</a>, UK, <a href="http://www.embl-heidelberg.de/srs/srsc?-id||777855676_129.186.4.14||-info||PRODOM"><strong>ProDom</strong></a> at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> and <a href="http://www.public.iastate.edu/~pedro/prodom_help.html"><strong>ProDom-Info</strong></a> at <a href="http://www.cc.iastate.edu/welcome.html">Iowa State</a> (W3)</dd><dd>* <a href="gopher://bmerc-gopher.bu.edu/11/Databases/prolink"><strong>ProLink</strong></a> - Integrated Database of Protein Structure, Sequence Homology, and Functional Pattern Information at <a href="http://bmerc-www.bu.edu/">BMERC</a> (Gopher)</dd><dd>* <a href="http://www.embl-heidelberg.de/prs.page"><strong>PROPSEARCH</strong></a> - Protein Sequence Search for Structural Homology Based on Aminoacid Properties at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://expasy.hcuge.ch/sprot/prosite.html"><strong>PROSITE</strong></a> - Protein Sites and Patterns Database at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland and <a href="http://www.ebi.ac.uk/searches/prosite_input.html"><strong>PROSITE-Search</strong></a> <strong>!Recent!</strong> at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="file://ftp.embl-heidelberg.de/pub/databases/protein_extras"><strong>Protein-Extras</strong></a> at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (FTP)</dd><dd>* <a href="http://www.public.iastate.edu/~pedro/p_families.html"><strong>Protein Families</strong></a> - Links to Information on Different Protein Families at <a href="http://www.cc.iastate.edu/">Iowa State</a> (W3)</dd><dd>* <a href="file://cb-iris.stanford.edu/pub/ProteinMovements/ProtMotDB.main.html"><strong>Protein Motions</strong></a> <strong>!New!</strong> - DataBase of Protein Movements at <a href="http://hyper.stanford.edu/">Stanford U.</a> (W3)</dd><dd>* <a href="http://psort.nibb.ac.jp/"><strong>PSORT</strong></a> <strong>!Recent!</strong> - Predict Protein Sorting Signals Coded in Amino Acid Sequences at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan (W3)</dd><dd>* <a href="http://dot.imgen.bcm.tmc.edu:9331/pssprediction/pssp.html"><strong>PSSP</strong></a> <strong>!New!</strong> - Protein Secondary Structure Prediction at <a puu="" protein_extras="" databases="" pub="" ftp.embl-heidelberg.de="" href="http://www.bcm.tmc.edu/%3EBaylor%20College%20of%20Medicine%3C/a%3E%20(W3)%3CDD%3E*%20%3Cahref="><strong>PUU</strong></a> - Protein Domains Database Based on PDB-Select at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (FTP)</dd><dd>* <a href="http://geta.life.uiuc.edu/index.html"><strong>RDP</strong></a> <strong>!New!</strong> - Ribosomal Database Project at U. Illinois (W3)</dd><dd>* <a href="http://vent.neb.com/rebase/rebase.html"><strong>ReBase</strong></a> <strong>!New!</strong> - Restriction Enzyme Database at <a href="http://vent.neb.com/">New England Biolabs</a>, <a href="http://www.embl-heidelberg.de/srs/srsc?-id||777855676_129.186.4.14||-info||REBASE"><strong>ReBase</strong></a> at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> and <a href="http://www.gdb.org/Dan/rebase/rebase.html"><strong>ReBase</strong></a> at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (W3)</dd><dd>* <a href="http://pundit.colorado.edu:8080/"><strong>RNA Secondary Structures</strong></a> - Information on Group I Introns and rRNA at <a href="http://www.colorado.edu/">U. Colorado-Boulder</a> (W3)</dd><dd>* <a href="http://www-rrna.uia.ac.be/rrna/index.html"><strong>rRNA</strong></a> <strong>!New!</strong> - Databases of Ribosomal Subunit RNA Sequences at <a href="http://www.uia.ac.be/">U. Antwerp</a>, Belgium (W3)</dd><dd>* <a href="http://base.icgeb.trieste.it/sbase/"><strong>SBASE</strong></a> - Library of Protein Domains and <a href="http://base.icgeb.trieste.it/sbase/blast.html"><strong>SBASE-Search</strong></a> at <a href="http://base.icgeb.trieste.it/">ICGEB-Trieste</a>, Italy (W3)</dd><dd>* <a href="http://geoff.biop.ox.ac.uk/servers/scanps_server.html"><strong>SCANPS</strong></a> - Scan Protein Sequences at <a href="http://geoff.biop.ox.ac.uk/">U. Oxford</a>, UK (W3)</dd><dd>* <a href="http://www.bio.cam.ac.uk/scop/"><strong>SCOP</strong></a> - Structural Classification of Proteins at <a href="http://www.bio.cam.ac.uk/">Cambridge</a>, UK and <a href="http://www.nick.med.usf.edu/scop/index.html"><strong>SCOP</strong></a> at <a href="http://www.nick.med.usf.edu/">U. South Florida</a> (W3)</dd><dd>* <a href="http://dot.imgen.bcm.tmc.edu:9331/seq-annot/home.html"><strong>Sequence Annotation</strong></a> - Annotations on NCBI Sequences at <a alces.med.umn.edu="" href="http://www.bcm.tmc.edu/%3EBaylor%20College%20of%20Medicine%3C/a%3E%20(W3)%3CDD%3E*%20%3Cahref="><strong>Sequence Translation</strong></a> - Translate Gene Sequences at <a href="http://www.umn.edu/">U. Minnesota</a> (W3)</dd><dd>* <a href="ftp://dasher.wustl.edu/pub/sleuth/data"><strong>Sleuth</strong></a> - Amino Acid Conformation and Solvent Accessibility of PDB Files at <a href="http://ibc.wustl.edu/">Washington U.</a> (FTP)</dd><dd>* <a href="http://www.ibcp.fr/predict.html"><strong>SOPM</strong></a> <strong>!New!</strong> - Self Optimized Prediction Method for Prediction of Protein Secondary Structure at <a href="http://www.ibcp.fr/">IBCP-CNRS</a>, France (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/srs/srsc"><strong>SRSWWW</strong></a> - Network Browser for Databanks in Molecular Biology (w/ <a href="http://www.embl-heidelberg.de/srs/net.html"><strong>diagram links</strong></a>) at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://www.ch.embnet.org/srs/index.html"><strong>SRSWWW-Directory</strong></a> <strong>!Recent!</strong> - Directory of SRSWWW Network Browsers for Biological Databanks and <a href="http://www.ch.embnet.org/srs/status.html"><strong>SRSWWW-Global Status</strong></a> <strong>!Recent!</strong> at <a href="http://www.ch.embnet.org/">EMBnet-Basel</a> (W3)</dd><dd>* [http://coot.embl.de/SSCP/ SSCP]: <font size="2">SSCP, <big>Secondary Structural Content Prediction</big></font><br />
* <a href="http://genome.eerie.fr/fasta/ssearch-query.html"><strong>SSEARCH</strong></a> <strong>!Recent!</strong> - Universal Sequence Comparison Using the Smith-Waterman Algorithm at <a href="http://genome.eerie.fr/home.html">EERIE-Nimes</a>, France (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/sspred/sspred_info.html"><strong>SSPRED</strong></a> <strong>!New!</strong> - Predict the Secondary Structure of Proteins at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a>, Germany (W3)</dd><dd>* <a href="http://www.ucmb.ulb.ac.be/~joan/survol/form.html"><strong>SURVOL</strong></a> <strong>!New!</strong> - Analysis of Protein Atomic Volumes at <a href="http://www.ucmb.ulb.ac.be/">UCMB</a>, Belgium (W3)</dd><dd>* <a href="http://expasy.hcuge.ch/ch2d/ch2d-top.html"><strong>Swiss-2DPage</strong></a> - Two-dimensional Polyacrylamide Gel Electrophoresis Database at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland (W3)</dd><dd>* <a href="http://www.ebi.ac.uk/srs/srsc?-info+SWISSDOM"><strong>SWISSDOM</strong></a> - SwissProt Entries in a ProDom Map at <a href="http://www.ebi.ac.uk/">EBI</a>, UK (W3)</dd><dd>* <a href="http://expasy.hcuge.ch/swissmod/SWISS-MODEL.html"><strong>Swiss-Model</strong></a> - Automated Protein Modelling at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland (W3)</dd><dd>* <a href="http://www.ebi.ac.uk/srs/srsc?-info||SWISSNEW"><strong>SWISSNEW</strong></a> - New SwissProt Sequences at <a href="http://www.ebi.ac.uk/">EBI</a>, UK (W3)</dd><dd>* <a href="http://expasy.hcuge.ch/sprot/sprot-top.html"><strong>SwissProt</strong></a> - Protein Sequence Database (+ Weekly Updates) at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland (W3)</dd><dd>* <a href="http://expasy.hcuge.ch/swisshop/SwissShopReq.html"><strong>Swiss-Shop</strong></a> - Automated SwissProt and Prosite Information Queries at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland (W3)</dd><dd>* <a href="http://www.gdb.org/Dan/tbase/tbase.html"><strong>TBASE</strong></a> <strong>!Recent!</strong> - Transgenic/Targeted Mutation Database at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (W3)</dd><dd>* <a href="http://genome.eerie.fr/fasta/tfasta-query.html"><strong>TFASTA</strong></a> <strong>!Recent!</strong> - Match a Protein Sequence Against All Six Frames of GenBank Sequences at <a href="http://genome.eerie.fr/home.html">EERIE-Nimes</a>, France (W3)</dd><dd>* <a href="gopher://gopher.nih.gov/77/gopherlib/indices/tfd/index"><strong>TFD</strong></a> - Transcription Factor Database at <a href="http://www.nih.gov/">NIH</a> (Gopher)</dd><dd>* <a href="http://www.embl-heidelberg.de/srs/srsc?-info+TFFACTOR"><strong>TFFACTOR</strong></a> and <a href="http://www.embl-heidelberg.de/srs/srsc?-info+TFSITE"><strong>TFSITE</strong></a> - Transcription Factor Data at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://alces.med.umn.edu/rawtm.html"><strong>Tm</strong></a> - Oligonucleotide Melting Point Determination at <a href="http://www.umn.edu/">U. Minnesota</a> (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/tmap/tmap_sin.html"><strong>TMAP</strong></a> - Identification of Transmembrane Segments on a Protein Sequence at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="ftp://ulrec3.unil.ch/pub/tmbase"><strong>TMBASE</strong></a> - Transmembrane Protein Database at <a href="http://www.unil.ch/">U. Lausanne</a>, Switzerland (FTP)</dd><dd>* <a href="http://genome.eerie.fr/gcg/translate-query.html"><strong>Translate</strong></a> <strong>!Recent!</strong> - Translate a Nucleotide Sequence into Amino Acid Sequence at <a href="http://genome.eerie.fr/home.html">EERIE-Nimes</a>, France (W3)</dd><dd>* <a href="http://cbrg.inf.ethz.ch/subsection3_1_6.html"><strong>TreeGen</strong></a> - Tree Generation from Distance Data at <a href="http://cbrg.inf.ethz.ch/">ETH-Zürich</a>, Switzerland (W3)</dd><dd>* <a href="http://www.embl-heidelberg.de/srs/srsc?-id||781260221_129.186.4.14||-info||TREMBL"><strong>TREMBL</strong></a> - Database of Translated Peptide Sequences of All CDS Features from EMBL Sequences at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a> (W3)</dd><dd>* <a href="http://cammsg3.caos.kun.nl:8000/srs/srsc?-info+VECBASE"><strong>VecBase</strong></a> <strong>!Recent!</strong> - Cloning Vector Sequence Database.at <a href="http://cammsg3.caos.kun.nl:8000/">CAOS/CAMM</a>, The Netherlands (W3)</dd><dd>* <a href="http://ben.vub.ac.be/srs/srsc?-info+VECTOR"><strong>VECTOR</strong></a> <strong>!Recent!</strong> - Cloning Vector Database at <a href="http://ben.vub.ac.be/">BEN</a>, Belgium (W3), <a href="gopher://gopher.gdb.org/77/.INDEX/vector"><strong>Vector</strong></a> at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> and <a href="gopher://virus1.virus.kyoto-u.ac.jp/77/.index/vector.ig/index"><strong>Vector-ig</strong></a> at <a href="http://virus1.virus.kyoto-u.ac.jp/">IVR</a>, Kyoto-U., Japan (Gopher)</dd><dd>* <a href="http://www.bio.cam.ac.uk/seqlogo/logo.cgi"><strong>WebLogo</strong></a> - Sequence Logo Generation at <a href="http://www.bio.cam.ac.uk/">Cambridge U.</a>, UK (W3)</dd></dl><hr />
<p><a name="part2">
<h2>Part 2: Bibliographic, Text and WWW Searches</h2>
<dl><dd>*</dd><dd>*</dd></dl></a></p>
<dl><dd><a href="gopher://probe.nalusda.gov/7waissrc%3A/.plant/.agricola/agidxB.src"><strong>AGRICOLA</strong></a> <strong>!New!</strong> - Bibliographic References (Plant Genome Subset) at <a href="gopher://probe.nalusda.gov/">USDA-NAL</a> (Gopher)</dd><dd>* <a href="http://www-lmmb.ncifcrf.gov/annRev.html"><strong>Annual Reviews</strong></a> <strong>!New!</strong> - Bibliographic Searches at <a href="http://www-lmmb.ncifcrf.gov/">LMMB-National Cancer Institute</a> (W3)</dd><dd>* <a href="http://www.lerc.nasa.gov/Doc/archieplex.html"><strong>ArchiePlexForm</strong></a> - Search Files Available by Anonymous FTP at <a href="http://www.lerc.nasa.gov/">LeRC-NASA</a> (W3)</dd><dd>* <a href="http://www.beckman.com/biorsrch/biorsrch.htm"><strong>Beckman-Bioresearch</strong></a> <strong>!New!</strong> - Information on Protein and DNA Applications, Meetings and Product Information at <a href="http://www.beckman.com/">Beckman Instruments</a> (W3)</dd><dd>* <a href="gopher://exogene.genethon.fr/11/Biblio/Journaux"><strong>BIBLIO</strong></a> - Molbio Journal Searches at <a href="http://www.genethon.fr/genethon_en.html">Genethon</a>, France (Gopher) and <a href="http://nxoc01.cern.ch:8001/net.bio.net/biology-journal-contents?"><strong>Biology Journal Contents</strong></a> at <a href="http://www.cern.ch/">CERN</a>, Switzerland (W3)</dd><dd>* <a href="http://www.bibsys.no/search/pube.html"><strong>BIBSYS</strong></a> <strong>!Recent!</strong> - Interuniversitary Bibliographic System in Norway (W3)</dd><dd>* <a href="gopher://genes.icgeb.trieste.it/77/.indexes/BIOBIB"><strong>BIOBIB</strong></a> - Biocomputing Bibliography at <a href="http://base.icgeb.trieste.it/">ICGEB-Trieste</a>, Italy (Gopher) and <a href="http://nxoc01.cern.ch:8001/wais.funet.fi:210/embnet%2Fcompalgo?"><strong>CompAlgo</strong></a> at <a href="http://www.cern.ch/">CERN</a>, Switzerland (W3)</dd><dd>* <a href="http://www.ebi.ac.uk/biocat/biocat.html"><strong>BioCatalog</strong></a> <strong>!Recent!</strong> - Catalog of Molecular Biology Programs at <a href="http://www.ebi.ac.uk/">EBI</a>, <a href="http://www.genethon.fr/exterieur/bio_catal.html"><strong>Bio-catalogue</strong></a> at <a href="http://www.genethon.fr/genethon_en.html">Genethon</a>, France and <a href="http://cammsg3.caos.kun.nl:8000/srs/srsc?-info+BIOCAT"><strong>BIOCAT</strong></a> <strong>!Recent!</strong> at <a href="http://cammsg3.caos.kun.nl:8000/">CAOS/CAMM</a>, The Netherlands (W3)</dd><dd>* <a href="http://www.public.iastate.edu/~pedro/rt_journals.html"><strong><font color="#810081">Bio/Chemical Journals and Newsletters</font></strong></a> <strong>!New!</strong> - Table of Contents and Abstracts of Different Titles at <a href="http://www.iastate.edu/">Iowa State</a> (W3)</dd><dd>* <a href="http://ibc.wustl.edu:70/1m/bio_remote/bio-email"><strong>Bio-Email</strong></a> - List of Biomedical E-Mail Servers and <a href="http://ibc.wustl.edu:70/7m/bio_remote/bio-emailhttp://ibc.wustl.edu:70/1m/bio_remote/bio-email"><strong>Bio-Email-Search</strong></a> at <a href="http://ibc.wustl.edu/">Washington U.</a> (W3)</dd><dd>* <a href="http://www.ftpt.br/cgi-bin/bioline/bioline"><strong>Bioline</strong></a> - Bio-Publications at <a href="http://www.ftpt.br/">Base de Dados Tropical</a>, Brazil (W3)</dd><dd>* <a href="http://bioinformatics.weizmann.ac.il:70/1s/biomoo"><strong>BioMOO</strong></a> - The Biologists' Virtual Meeting Place at <a href="http://bioinformatics.weizmann.ac.il:70/">Weizmann Institute of Science</a>, Israel (W3)</dd><dd>* <a href="gopher://net.bio.net/77/.wais-sources/biology-journal-contents"><strong>Bionet Journal</strong></a> Articles and <a href="gopher://net.bio.net/77/.wais-sources/biosci"><strong>Bionet News</strong></a> (Gopher)</dd><dd>* <a href="gopher://s-crim1.dl.ac.uk/7waissrc%3a/BIOSCI%20archives"><strong>BIOSCI</strong></a> Archives at <a href="gopher://s-crim1.dl.ac.uk/">EMBnet-UK</a> (Gopher) and <a href="http://nxoc01.cern.ch:8001/net.bio.net/biosci?"><strong>BIOSCI</strong></a> at <a href="http://www.cern.ch/">CERN</a>, Switzerland (W3)</dd><dd>* <a href="gopher://stack.serpukhov.su/11/biotech/"><strong>Biotechnology Abstracts DataBase</strong></a> at <a href="http://www.stack.serpukhov.su/home.html">Stack-Serpukhov</a>, Russia (Gopher)</dd><dd>* <a href="http://www.inform.umd.edu/EdRes/Topic/AgrEnv/Biotech/Bibliographies"><strong>Biotechnology Bibliographies</strong></a> at <a href="http://www.inform.umd.edu/EdRes/Topic/AgrEnv/Biotech">BIC-U. Maryland/College Park</a> (W3)</dd><dd>* <a href="gopher://gopher.gdb.org:3005/7"><strong>BOING</strong></a> - Bio Oriented INternet Gophers at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (Gopher)</dd><dd>* <a href="http://mbisg2.sbc.man.ac.uk/brassp.html"><strong>BRASS</strong></a> - Bioinformatics Resource for Algorithms, Software and Sequences at <a href="http://mbisg2.sbc.man.ac.uk/">U. Manchester</a>, UK (W3)</dd><dd>* <a href="telnet://database.carl.org/"><strong>CARL UnCover</strong></a> - Bibliographic Service from U. Texas (Telnet)</dd><dd>* <a href="gopher://lib-gopher.lib.indiana.edu:7050/11/cciim"><strong>CCIIM</strong></a> <strong>!New!</strong> - Clearinghouse for Chemical Information Instructional Materials at <a href="gopher://lib-gopher.lib.indiana.edu:7050/">Indiana U.</a> (Gopher)</dd><dd>* <a href="gopher://locus.nalusda.gov/7waissrc%3a/.other_bio_gophers/.cris/cris.src"><strong>CRIS</strong></a> - Current Research Information System on Research Grants at <a href="gopher://locus.nalusda.gov/">USDA</a> (Gopher)</dd><dd>* <a href="gopher://weeds.mgh.harvard.edu/1ftp%3aweeds.mgh.harvard.edu%40/pub/codon/"><strong>Codon Usage Tables</strong></a> at Massachusetts General Hospital-<a href="http://golgi.harvard.edu/">Harvard</a> and <a href="gopher://gopher.nih.gov/00/molbio/gencode"><strong>Table of Standard Genetic Code</strong></a> at <a href="http://www.nih.gov/">NIH</a> (Gopher)</dd><dd>* <a href="http://www.gdb.org/Dan/rebase/comp.html"><strong>Companies Selling Restriction Enzymes</strong></a> - Select Companies and Enzymes at <a href="http://www.gdb.org/">John Hopkins</a> (W3)</dd><dd>* <a href="http://hackberry.chem.niu.edu:70/0/ConferenceListings/index.html"><strong>Conference Listings</strong></a> - Search Chemistry, Biology and Medicine Conference Catalogs at <a href="http://hackberry.chem.niu.edu:70/0/webpage.html">Northern Illinois</a> (W3)</dd><dd>* <a href="http://www.dra.com/drewdb"><strong>DataResearch-Demo</strong></a>, <a href="http://www.dra.com/lcauth"><strong>-Authority</strong></a> and <a href="http://www.dra.com/lcmarc"><strong>-LCMARC</strong></a> Databases at Data Research Associates (W3)</dd><dd>* <a href="gopher://biox.embnet.unibas.ch:13020/77/.index/index"><strong>DIBUG</strong></a> - Discover Insight Biosym User Group Mailing List at <a href="gopher://biox.embnet.unibas.ch/">EMBnet-Basel</a>, Switzerland (Gopher)</dd><dd>* <a href="gopher://gopher.slu.se/7waissrc%3a/wais-dbs/Biology/bionic-embl-software"><strong>EMBL-Software</strong></a> - Listing of Software Available from EMBL at <a href="gopher://gopher.slu.se/">U. of Agricultural Sciences</a>, Sweden (Gopher) and <a href="http://www.gdb.org/bio/search/FILT/embl.all.html"><strong>EMBL.ALL-Search</strong></a> at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (W3)</dd><dd>* <a href="http://kufacts.cc.ukans.edu/cwis/units/fgsc/main.html"><strong>FGSC</strong></a> - Fungal Genetics Stock Center Online Catalogue at <a href="http://kufacts.cc.ukans.edu/cwis/kufacts_start.html">U. Kansas</a> (W3)</dd><dd>* <a href="http://www.fisher1.com/Fisher/biotech.html"><strong>FisherBiotech</strong></a> <strong>!New!</strong> - Reagents Catalog with Safety Information at <a href="http://www.fisher1.com/">Fisher Scientific</a> (W3)</dd><dd>* <a href="gopher://gopher.gdb.org/77/.INDEX/gentools"><strong>GenTools</strong></a> at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (Gopher)</dd><dd>* <a href="http://lib-www.ucr.edu/bioag/"><strong>INFOMINE</strong></a> <strong>!Recent!</strong> - Search Biological, Agricultural and Medical Resources at <a href="http://www.ucr.edu/">U. California-Riverside</a> (W3)</dd><dd>* <a href="http://www.chemie.fu-berlin.de/chemistry/index/"><strong>Internet Chemistry Index</strong></a> <strong>!New!</strong> - Chemistry WWW Pages and Services at <a href="http://www.chemie.fu-berlin.de/">FU-Berlin</a> (W3) at</dd><dd>* <a href="gopher://gopher.electriciti.com/11/invitrogen"><strong>Invitrogen</strong></a> - Vector Sequences, Protocols and Product Information (Gopher)</dd><dd>* <a href="gopher://liberty.uc.wlu.edu:3002/7"><strong>Jughead</strong></a> - Gopher Directory Search at <a href="gopher://liberty.uc.wlu.edu/">W&L</a> (Gopher)</dd><dd>* <a href="http://www.cs.monash.edu.au/~lloyd/tildeBIB"><strong>L.Allison Biblio</strong></a> - Collected References in Algorithms, Computing for Molecular Biology, WWW Sites, etc. at <a href="http://www.cs.monash.edu.au/">Monash University</a>, Australia (W3)</dd><dd>* <a href="gopher://gopher.ucsc.edu/7waissrc%3a/.WAIS/Life_Sciences_CD_sources.src"><strong>Life Sciences List of Journals</strong></a> at <a href="gopher://gopher.ucsc.edu/">UCSC</a> (Gopher)</dd><dd>* <a href="http://expasy.hcuge.ch/cgi-bin/experts"><strong>List of On-Line Experts</strong></a> - Contacts of Experts on Different Proteins/Enzymes at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland (W3)</dd><dd>* <a href="http://expasy.hcuge.ch/txt/nomlist.txt"><strong>List of Protein Nomenclature References</strong></a> - References on Protein Nomenclature and Terminology at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland (W3)</dd><dd>* <a href="http://expasy.hcuge.ch/cgi-bin/listdoc"><strong>Listdoc</strong></a> - Amos Bairoch's List Documents Describing Molecular Biology Oriented Services, Software, Email Servers, FTP Sites, etc. at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland (W3)</dd><dd>* <a href="http://www.genome.ad.jp/htbin/bfind_litdb"><strong>LITDB</strong></a> - PRF Protein/Peptide Literature Database at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan (W3)</dd><dd>* <a href="http://ncbi.nlm.nih.gov:2555/r_medline.html"><strong>MEDLINE </strong></a>- Bibliographic References (Subset in Molecular Genetics) of the National Library of Medicine and <a href="http://atlas.nlm.nih.gov:5700/Entrez/index.html"><strong>ENTREZ-MEDLINE Subset</strong></a> <strong>!New!</strong> at <a href="http://www.ncbi.nlm.nih.gov/">NCBI</a> and <a href="http://www.embl-heidelberg.de/srs/srsc?-id||777855676_129.186.4.14||-info||MEDLINE"><strong>MEDLINE</strong></a> at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a>(W3)</dd><dd>* <a href="http://www.gdb.org/Dan/catal/milli-intro.html"><strong>Millipore On-line Catalog</strong></a> at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (W3)</dd><dd>* <a href="gopher://atlas.chem.utah.edu/11/MSDS"><strong>MSDS</strong></a> and <a href="gopher://biochemistry.bioc.cwru.edu/7sc%3a/database/utahmsds.mnu"><strong>MSDS-Search</strong></a> - Material Safety Data Sheets at Utah U., <a href="gopher://isumvs.iastate.edu/1~db.CCINFO2.MSDS"><strong>Fisher Scientific MSDS's</strong></a> at <a href="http://www.cc.iastate.edu/welcome.html">Iowa State</a> and <a href="gopher://genes.icgeb.trieste.it/11/biosafety/lab/mat"><strong>MSDS-Info</strong></a> at <a href="http://base.icgeb.trieste.it/">ICGEB-Trieste</a>, Italy (Gopher)</dd><dd>* <a href="http://www.inform.umd.edu/EdRes/Topic/AgrEnv/Biotech/Miscellaneous_Pubs/meeting.lst"><strong>Meetings/Symposia/Workshopsin Biotechnology </strong></a>at <a href="http://www.inform.umd.edu/EdRes/Topic/AgrEnv/Biotech">BIC-U. Maryland/College Park</a> (W3)</dd><dd>* <a href="http://www.inform.umd.edu/EdRes/Topic/AgrEnv/Biotech/Newsletters"><strong>Newsletters</strong></a> - Newsletters in Biotechnology Issues at <a href="http://www.inform.umd.edu/EdRes/Topic/AgrEnv/Biotech">BIC-U. Maryland/College Park</a> (W3)</dd><dd>* <a href="gopher://stis.nsf.gov/77/.index/wais-sources/nsf-awards"><strong>NSF-Awards</strong></a> - Information on Research Grants at <a href="gopher://stis.nsf.gov/">NSF</a> (Gopher)</dd><dd>* <a href="http://golgi.harvard.edu/journals.html"><strong>On-line Journals</strong></a> at <a href="http://golgi.harvard.edu/">Harvard</a> (W3)</dd><dd>* <a href="http://www.gdb.org/bio/search/FILT/owlref.html"><strong>OWLREF</strong></a> <strong>!New!</strong> - Search the References of OWL (Non-Redundant Protein Database) at <a href="http://www.gdb.org/">John Hopkins</a> (W3)</dd><dd>* <a href="http://sunsite.unc.edu/patents/intropat.html"><strong>Patents</strong></a> <strong>!Recent!</strong> - STO's Internet Patent Search System at <a href="http://sunsite.unc.edu/">SunSITE-USA/UNC-Chapel Hill</a> (W3)</dd><dd>* <a href="http://technical.powells.portland.or.us/search.html"><strong>Powell's Technical Books</strong></a> - Consult Titles and Prices at <a href="http://technical.powells.portland.or.us/">Powell's Technical Bookstore</a> (W3)</dd><dd>* <a href="http://ccinfo.ims.ac.jp/cgi-bin/qcpe"><strong>QCPE</strong></a> - Quantum Chemistry Program Exchange Program Library at <a href="http://ccinfo.ims.ac.jp/">Okazaki National Research Institute</a>, Japan (W3) and <a href="gopher://hackberry.chem.niu.edu/11/Quantum%20Chemistry%20Acronyms%20Database"><strong>Quantum Chemistry Acronyms Database</strong></a> at <a href="gopher://hackberry.chem.niu.edu/">Northern Illinois U.</a>(Gopher)</dd><dd>* <a href="http://biotech.chem.indiana.edu/lib/search.html"><strong>Resource-Search</strong></a> - Search Biotechnology Links at <a href="http://biotech.chem.indiana.edu/">Biotech-Indiana</a> (W3)</dd><dd>* <a href="gopher://ava.bcc.orst.edu/00/mgd/useful_tools/journams.txt"><strong>Scientific Journal Abbreviation</strong></a> at <a href="gopher://ava.bcc.orst.edu/">Oregon State</a> (Gopher)</dd><dd>* <a href="http://expasy.hcuge.ch/sprot/seqanalr.html"><strong>Seqanalref</strong></a> - Sequence Analysis Bibliographic Reference Data Bank at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland and <a href="http://golgi.harvard.edu/htbin/sar-search-cit"><strong>Seqanalref</strong></a> - at <a href="http://golgi.harvard.edu/">Harvard</a> (W3)</dd><dd>* <a href="http://www.gdb.org/Dan/softsearch/softsearch.html"><strong>Softsearch</strong></a> - Search and Retrieve Software and Data starting at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (W3)</dd><dd>* <a href="gopher://morris.lib.udel.edu/11/indexes/toc/springer"><strong>Springer Verlag Journals</strong></a> - Tables of Contents of Different Titles (Gopher)</dd><dd>* <a href="http://ucmp1.berkeley.edu/taxaform.html"><strong>Taxaform</strong></a> <strong>!New!</strong> - Ride the Web Lift to Taxonomy at <a tree="" phylogeny.arizona.edu="" href="http://ucmp1.berkeley.edu/%3EUC-M.%20of%20Paleontology%3C/a%3E%20(W3)%3CDD%3E*%20%3CAHREF="><strong>The Tree of Life</strong></a> <strong>!Recent!</strong> - A Phylogenetic Navigation System for the Internet at <a href="http://www.arizona.edu/">U. Arizona</a> (W3)</dd><dd>* <a href="http://town.hall.org/cgi-bin/srch-patent"><strong>U.S. Patent Database</strong></a> at <a href="http://town.hall.org/">Town Hall</a> (W3)</dd><dd>* <a href="http://patents.cnidr.org/pto/classes.html"><strong>U.S. Patent Classifications</strong></a> - Information on Classification Scheme and Class Definitions including <a href="http://patents.cnidr.org/pto/classes/us/424/424.html"><strong>Class 424 - Drug, Bio-Affecting and Body Treating Compositions</strong></a>, <a href="http://patents.cnidr.org/pto/classes/us/435/435.html"><strong>Class 435 - Chemistry: Molecular Biology and Microbiology</strong></a> and <a href="http://patents.cnidr.org/pto/classes/us/930/930.html"><strong>Class 930 - Peptide or Protein Sequence</strong></a> and <a href="http://patents.cnidr.org/pto/access.html"><strong>AIDS Patents Databases</strong></a> at <a href="http://cnidr.org/welcome.html">CNIDR</a> (W3)</dd><dd>* <a href="gopher://veronica.scs.unr.edu/11/veronica"><strong>Veronica </strong></a>- Search Gopher Files and Directories at <a href="gopher://veronica.scs.unr.edu/">U. Nevada</a> (Gopher)</dd><dd>* <a href="http://www.cc.gatech.edu/gvu/search_engines.html"><strong>W3 Search Engines</strong></a> at <a href="http://www.gatech.edu/">Georgia Tech</a> (W3)</dd><dd>* <a href="http://webcrawler.cs.washington.edu/WebCrawler/WebQuery.html"><strong>WebCrawler</strong></a> <strong>!New!</strong> at <a href="http://www.uwtc.washington.edu/UWHome.html">U. Washington</a> (W3)</dd><dd>* <a href="http://webcrawler.cs.washington.edu/WebCrawler/WebIndexes.html"><strong>WebIndexes</strong></a> <strong>!New!</strong> at <a href="http://www.uwtc.washington.edu/UWHome.html">U. Washington</a> (W3)</dd><dd>* <a href="http://golgi.harvard.edu/htbin/biopages"><strong>WWW VL Biosciences Index</strong></a> - Search Keith Robison's Catalogs at <a href="http://golgi.harvard.edu/">Harvard</a> (W3)</dd><dd>* <a href="http://www.cs.colorado.edu/home/mcbryan/WWWW.html"><strong>WWW Worm</strong></a> at <a href="http://www.cs.colorado.edu/home/capp/index.html">U. Colorado-Boulder</a> (W3)</dd></dl><hr />
<p><a name="part3">
<h2>Part 3: Guides, Tutorials and Help Tools</h2>
<dl><dd>*</dd><dd>*</dd></dl></a></p>
<dl><dd><a href="http://www.chemie.fu-berlin.de/cgi-bin/abbscomp"><strong>Abbreviation of Chemical Compounds</strong></a> at <a href="http://www.chemie.fu-berlin.de/">FU-Berlin</a>, Germany (W3)</dd><dd>* <a href="gopher://info.umd.edu:901/00/inforM/Educational_Resources/AcademicResourcesByTopic/AgricultureEnvironmentResources/Biotechnology_Information_Center/Miscellaneous_Pubs/AG-BIOTECH"><strong>Ag/Biotech Electronic Information Resources</strong></a> at U. Maryland (Gopher)</dd><dd>* <a href="http://www.chemie.fu-berlin.de/chemistry/bio/amino-acids.html"><strong>Amino Acids</strong></a> at <a href="http://www.chemie.fu-berlin.de/">FU-Berlin</a>, Germany (W3)</dd><dd>* <a href="http://www.biochem.ucl.ac.uk/~mcdonald/atlas/"><strong>Atlas of Side-Chain and Main-Chain Hydrogen Bonding</strong></a> <strong>!New!</strong> at <a href="http://www.biochem.ucl.ac.uk/">UCL-London</a>, UK (W3)</dd><dd>* <a href="http://medix.mmi.uct.ac.za/bbhelp/con2.html"><strong>BBHelp</strong></a> <strong>!New!</strong> - Molecular Biology Help at <a href="http://www.uct.ac.za/">U. Cape Town</a>, South Africa (W3)</dd><dd>* <a href="http://www.td.anl.gov/InternetGuide.html"><strong>Big Dummy's Guide to the Internet</strong></a> (W3)</dd><dd>* <a href="http://www.ch.embnet.org/jam/int_unix/JAMINX.HTML"><strong>Biocomputing Survival Guide</strong></a> - A Cookbook for the User of Computers in Molecular Biology at <a href="gopher://biox.embnet.unibas.ch/">EMBnet-Basel</a>, Switzerland (W3)</dd><dd>* <a href="http://bioinformatics.weizmann.ac.il:70/1s/bioguide"><strong>BioGuide</strong></a> - PCR Guide at <a href="http://bioinformatics.weizmann.ac.il:70/">Weizmann Institute of Science</a>, Israel (W3)</dd><dd>* <a href="gopher://lenti.med.umn.edu/11/Biologically%20Related%20Information/Biologist%27s%20Guide%20to%20the%20Internet"><strong>Biologist's Guide to Internet Resources</strong></a> at <a href="http://www.umn.edu/">U. Minnesota</a> (Gopher)</dd><dd>* <a href="gopher://life.anu.edu.au/00/molecular_biology/biosci.FAQ"><strong>BIOSCI/Bionet FAQ</strong></a> at <a href="gopher://life.anu.edu.au/">ANU</a>, Australia (Gopher)</dd><dd>* <a href="http://earth1.epa.gov/biotech_rule/biotech_support/"><strong>Biotech-Support</strong></a> - Decision Documents and Risk Assessments on Different Microorganisms Used by Man at <a href="http://earth1.epa.gov/">EPA</a> (W3)</dd><dd>* <a href="gopher://megasun.bch.umontreal.ca/00/CMB/Help/birch.txt"><strong>BIRCH</strong></a> - Biological Research Computer Hierarchy User's Guide at U. Montreal, Canada (Gopher)</dd><dd>* <a href="gopher://gopher.gdb.org/11/bioftp/book-reviews"><strong>Book Reviews in Biology</strong></a> at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (Gopher)</dd><dd>* <a href="gopher://gopher.csc.fi/00/tiede/kemia/ChemistsGuide"><strong>Chemist's Guide to Network Resources</strong></a> at <a href="http://www.csc.fi/CSC_english.html">CSC</a>, Finland (Gopher)</dd><dd>* <a href="http://www.chemie.fu-berlin.de/chemistry/general/units.html"><strong>Conversion of Units</strong></a> <strong>!New!</strong> at <a href="http://www.chemie.fu-berlin.de/">FU-Berlin</a>, Germany (W3)</dd><dd>* <a href="http://lenti.med.umn.edu/~mwd/cell_www/cell.html"><strong>Course/Tutorial in Cell Biology</strong></a> <strong>!New!</strong> at <a href="http://www.umn.edu/">U. Minnesota</a>, <a href="http://www.cc.emory.edu/EMORY_CLASS/CELL_BIOLOGY/Cell_Biology/Cell_Biology.html"><strong>Course in Cell Biology</strong></a> at <a href="http://www.cc.emory.edu/">Emory U.</a> (W3) and <a href="gopher://brise.ere.umontreal.ca/11/bb/textes/notes"><strong>Course in Cell Biology</strong></a> (in French) at U. Montreal, Canada (Gopher)</dd><dd>* <a href="http://cammsg3.caos.kun.nl:8000/genomics/GDB_OMIM_TOC.html"><strong>Course on GDB and OMIM Access</strong></a> <strong>!New!</strong> at <a href="http://cammsg3.caos.kun.nl:8000/index.html">CAOS/CAMM</a>, The Netherlands (W3)</dd><dd>* <a href="http://turner.lamf.uwindsor.ca/exhibits/courses/59-261/welcome.html"><strong>Course on Organic Chemistry of Biomolecules</strong></a> at U. Windsor, Canada (W3)</dd><dd>* <a href="http://www.cryst.bbk.ac.uk/PPS/index.html"><strong>Course on Principles of Protein Structure</strong></a> <strong>!Recent!</strong> - A Collaborative Virtual Course Organized by the <a href="http://www.dl.ac.uk/CBMT/HOME.html"><strong>Collaborative BioMolecular Tools</strong></a> at <a href="http://www.cryst.bbk.ac.uk/">Birkbeck College-Londen</a>, UK (W3)</dd><dd>* <a href="http://lenti.med.umn.edu/recombinant_dna/recombinant_flowchart.html"><strong>Course on Recombinant DNA Technology</strong></a> at <a href="http://www.umn.edu/">U. Minnesota</a> (W3)</dd><dd>* <a href="gopher://info.umd.edu:901/00/inforM/Educational_Resources/AcademicResourcesByTopic/AgricultureEnvironmentResources/Biotechnology_Information_Center/Miscellaneous_Pubs/dbs-bbs.lst"><strong>Databases Related to Agricultural Biotechnology</strong></a> at U. Maryland (Gopher)</dd><dd>* <a href="http://www.public.iastate.edu/~pedro/dictionaries.html"><strong>Dictionaries</strong></a> at <a href="http://www.cc.iastate.edu/welcome.html">Iowa State</a> (W3)</dd><dd>* <a href="http://130.209.9.190/"><strong>Dictionary of Cell Biology</strong></a> at <a href="http://130.209.9.190/IBLS/IBLS-home.html">IBLS-Glasgow U.</a>, UK (W3)</dd><dd>* <a href="gopher://info.umd.edu:901/00/inforM/Educational_Resources/AcademicResourcesByTopic/AgricultureEnvironmentResources/Biotechnology_Information_Center/Miscellaneous_Pubs/direct.lst"><strong>Directories Related to Agricultural Biotechnology</strong></a> at U. Maryland (Gopher)</dd><dd>* <a href="http://www2.pasteur.fr/~tekaia/GCGdoc/Doc.html"><strong>GCGdoc</strong></a> <strong>!Recent!</strong> - GCG Documentation (V.8) at <a href="http://www.pasteur.fr/">Institut Pasteur</a>, France and <a href="http://titus.u-strasbg.fr/Computer/GCGdoc/DocF.html"><strong>GCGdoc-Français</strong></a> <strong>!Recent!</strong> at <a href="http://titus.u-strasbg.fr/HomePage.html">IGBMC-U. Strasbourg</a>, France (W3)</dd><dd>* <a href="http://sci.wfeb.edu/HELP/@GCGHELP:GENMANUAL"><strong>GCG-GenManual</strong></a> (Analysis Type) and <a href="http://sci.wfeb.edu/HELP/@GCGHELP:GENHELP"><strong>GCG-GenHelp</strong></a> (Program Name) at <a href="http://golgi.harvard.edu/">Harvard</a> (W3)</dd><dd>* <a href="http://geoff.biop.ox.ac.uk/manuals/alscript/alscript.html"><strong>Guide to Alscript</strong></a> at <a href="http://geoff.biop.ox.ac.uk/">U. Oxford</a>, UK (W3)</dd><dd>* <a href="http://www-bio.unizh.ch/sw/swbiosym.html"><strong>Guide to Biosym Software</strong></a> at <a href="http://www-bio.unizh.ch/">U. Zurich</a>, Switzerland (W3)</dd><dd>* <a href="gopher://infomeister.osc.edu:73/00/documents/drug.design.guide"><strong>Guide to Computer-Assisted Drug Design</strong></a> at Computational Chemistry Archives-Ohio (Gopher)</dd><dd>* <a href="http://fconvx.ncifcrf.gov:2001/~toms/delila.html"><strong>Guide to Delila</strong></a> at <a href="http://fconvx.ncifcrf.gov:2001/">NCI-FCRF</a> (W3)</dd><dd>* <a href="gopher://dna.cedb.uwf.edu/11/Miscellaneous/Lab%20Protocols/DNA%20Cloning%20in%20E.coli"><strong>Guide to DNA Cloning in E. coli</strong></a> at UWF (Gopher)</dd><dd>* <a href="http://lenti.med.umn.edu/MolBio_man/MolBio_man.html"><strong>Guide to GCG</strong></a> and AGRENET at <a href="http://www.umn.edu/">U. Minnesota</a> (W3)</dd><dd>* <a href="http://www.chem.duke.edu/research/prisant/protein/protein.html"><strong>Guide to Geometric Aspects of Protein Structure and Function</strong></a> at Duke (W3)</dd><dd>* <a href="gopher://una.hh.lib.umich.edu/00/inetdirsstacks/molbio%3ahayden"><strong>Guide to Molecular Biology Databases</strong></a> at <a href="gopher://una.hh.lib.umich.edu/">U. Michigan</a> (W3)</dd><dd>* <a href="http://www.nih.gov/molecular_modeling/gateway.html"><strong>Guide to Molecular Modeling</strong></a> at <a href="http://www.nih.gov/">NIH</a> (W3)</dd><dd>* <a href="gopher://info.umd.edu:901/00/inforM/Educational_Resources/AcademicResourcesByTopic/AgricultureEnvironmentResources/Biotechnology_Information_Center/Miscellaneous_Pubs/pathfinder.biotech"><strong>Guide to Printed Information Sources in Biotechnology</strong></a> at U. Maryland (Gopher)</dd><dd>* <a href="http://condor.embl-heidelberg.de:2604/check/checks/ProCheck/documentation/"><strong>Guide to ProCheck</strong></a> at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a>, Germany (W3)</dd><dd>* <a href="http://www.cryst.bbk.ac.uk/PPS/vsns-pps/technology/main.html"><strong>Guide to RasMol</strong></a> <strong>!Recent!</strong> (see <a href="ftp://ftp.dcs.ed.ac.uk/pub/rasmol">Source</a>) at <a href="http://www.cryst.bbk.ac.uk/">Birkbeck College-London</a>, UK (W3)</dd><dd>* <a href="http://twod.med.harvard.edu/seqanal/index.html"><strong>Guide to Sequence Search </strong></a>at <a href="http://golgi.harvard.edu/">Harvard</a> (W3)</dd><dd>* <a href="http://www.arc.umn.edu/GVL/Software/xmol/XMol.html"><strong>Guide to XMol</strong></a> at <a href="http://www.umn.edu/">U. Minnesota</a> (W3)</dd><dd>* <a href="http://www.ch.ic.ac.uk/chemical_mime.html"><strong>Hyperactive Molecules Using Chemical MIME</strong></a> - WWW Display of 3D Chemical Information at <a href="http://www.ch.ic.ac.uk/">Imperial College</a>, UK (W3)</dd><dd>* <a href="http://www.chemie.fu-berlin.de/chemistry/general/constants.html"><strong>Fundamental Physical Constants</strong></a> at <a href="http://www.chemie.fu-berlin.de/">FU-Berlin</a>, Germany (W3)</dd><dd>* <a href="gopher://weeds.mgh.harvard.edu/11/dept_molbiol/molbiol/brent/interaction_trap"><strong>Interaction Trap</strong></a> - Method to clone cDNAs of proteins that interact w/ known protein at <a href="http://golgi.harvard.edu/">Harvard</a> (Gopher)</dd><dd>* <a href="http://biotech.chem.indiana.edu/intro2.html"><strong>Introduction to Searching Internet Biotechnology Resources</strong></a> at <a href="http://biotech.chem.indiana.edu/">Biotech-Indiana</a> (W3)</dd><dd>* <a href="gopher://asparagin.cenargen.embrapa.br:71/11/manual"><strong>Manual of Biosafety (UNIDO)</strong></a> at <a href="gopher://asparagin.cenargen.embrapa.br:71/">EMBRAPA</a>, Brazil (Gopher)</dd><dd>* <a href="http://www.uct.ac.za/microbiology/manualin.html"><strong>Manual of Molecular Biology Techniques</strong></a> <strong>!New!</strong> at <a href="http://www.uct.ac.za/">U. Cape Town</a>, South Africa (W3)</dd><dd>* <a href="gopher://ftp.bio.indiana.edu/1m/Molecular-Biology/Materials%2bMethods"><strong>Materials & Methods</strong></a> and <a href="gopher://ftp.bio.indiana.edu/77/.indices/methods"><strong>M&M-Search</strong></a> - Laboratory Protocols at Bio-Indiana (Gopher)</dd><dd>* <a href="gopher://fsuj50.rz.uni-jena.de/11/misc/mathebio"><strong>Mathematics & Biology</strong></a> at <a href="http://www.imb-jena.de/">IMB-Jena</a>, Germany and <a href="gopher://merlot.gdb.org/11/Math-In-Biology/math"><strong>Mathematics & Biology</strong></a> at <a href="gopher://merlot.gdb.org/">John Hopkins</a> (Gopher)</dd><dd>* <a href="http://www.sander.embl-heidelberg.de/modules/"><strong>MODULES in Extracellular Proteins</strong></a> <strong>!New!</strong> at <a href="http://www.embl-heidelberg.de/"><font color="#810081">EMBL-Heidelberg</font></a>, Germany (W3)</dd><dd>* <a href="http://research.nwfsc.noaa.gov/protocols.html"><strong>Molecular Biology Protocols</strong></a> <strong>!New!</strong> at <a href="http://research.nwfsc.noaa.gov/">NWFSC-NOAA</a> (W3)</dd><dd>* <a href="http://www.leeds.ac.uk/bionet/student/carbohyd/index.htm"><strong>Monosaccharide Browser</strong></a> - Investigate Monosaccharide Structure at <a href="http://www.leeds.ac.uk/">U. Leeds</a>, UK (W3)</dd><dd>* <a href="http://ubu.hahnemann.edu/Heme-Iron/NetWelco.htm"><strong>NetBiochem</strong></a> - Medical Biochemistry Course at U. Utah (W3)</dd><dd>* <a href="http://www.gdb.org/Dan/DOE/intro.html"><strong>Primer on Molecular Genetics</strong></a> at <a href="http://www.gdb.org/hopkins.html">John Hopkins</a> (W3)</dd><dd>* <a href="gopher://gopher.citi2.fr/11/biolo/dico/dicof"><strong>Molbio French Dictionary</strong></a> and its <a href="gopher://gopher.citi2.fr/11/biolo/dico/dicoa"><strong>English-French</strong></a> Version at CITI2, France (Gopher)</dd><dd>* <a href="http://lenti.med.umn.edu/insitu_pcr/chap-shoot2.fm.html"><strong>PCR <em>in situ</em> (1)</strong></a> and <a href="http://lenti.med.umn.edu/insitu_pcr/chapter3.7/chapter3.7.fm.html"><strong>PCR <em>in situ</em> (2)</strong></a> at <a href="http://www.umn.edu/">U. Minnesota</a> (W3)</dd><dd>* <a href="http://www.cchem.berkeley.edu/Table/index.html"><strong>Periodic Table</strong></a> at <a href="http://www.cchem.berkeley.edu/">Berkeley</a> and <a href="http://www2.shef.ac.uk/chemistry/web-elements/periodic-table.html"><strong>WebElements</strong></a> at <a href="http://www2.shef.ac.uk/">U. Shefield</a>, UK (W3)</dd><dd>* <a href="http://www.public.iastate.edu/~pedro/rasmol.html"><strong>RasmolHELP</strong></a> at <a href="http://www.cc.iastate.edu/welcome.html">Iowa State</a> (W3)</dd><dd>* <a href="http://scsg9.unige.ch/eng/toc.html"><strong>Representation of Molecular Models and Rendering Techniques</strong></a> at <a href="http://www.unige.ch/">Geneva U.</a>, Switzerland (W3)</dd><dd>* <a href="http://www.chemie.fu-berlin.de/chemistry/general/si.html"><strong>SI Units</strong></a> at <a href="http://www.chemie.fu-berlin.de/">FU-Berlin</a>, Germany (W3)</dd><dd>* <a href="http://expasy.hcuge.ch/ch2d/technical-info.html"><strong>Technical information on 2-D PAGE</strong></a> at <a href="http://expasy.hcuge.ch/">ExPASY</a>, Switzerland (W3)</dd><dd>* <a href="http://www.chem.vt.edu/chem-ed/ac-home.html"><strong>Tutorials in Analytical Chemistry</strong></a> at <a href="http://www.chem.vt.edu/">Virginia Tech</a> (W3)</dd><dd>* <a href="http://biomed.nus.sg/HIS/txt/menu/tacmenu.html"><strong>Tutorial in Cytology</strong></a> <strong>!Recent!</strong> at <a href="http://biomed.nus.sg/HIS/HIS.html">NUS-HISTONET</a>, Singapure (W3)</dd><dd>* <a href="http://www.bocklabs.wisc.edu/Tutorial.html"><strong>Tutorials in General Virology</strong></a> at <a href="http://www.bocklabs.wisc.edu/">IMV-U. Wisconsin-Madison</a> (W3)</dd><dd>* <a href="http://www.uct.ac.za/microbiology/virtut1.html"><strong>Tutorial in Molecular Virology</strong></a> <strong>!New!</strong> and <a href="http://medix.mmi.uct.ac.za/~jmoodie/welcome1.html"><strong>Tutorial in Clinical Virology</strong></a> <strong>!New!</strong> at <a href="http://www.uct.ac.za/">U. Cape Town</a>, South Africa (W3)</dd><dd>* <a href="http://www.chem.vt.edu/chem-ed/org-home.html"><strong>Tutorials in Organic Chemistry</strong></a> at <a href="http://www.chem.vt.edu/">Virginia Tech</a> (W3)</dd><dd>* <a href="http://www-wilson.ucsd.edu/education/samplegateway.html"><strong>Tutorials in Physical Chemistry</strong></a> <strong>!New!</strong> at <a href="http://www.ucsd.edu/">UC-San Diego</a> and <a href="http://www.chem.vt.edu/chem-ed/pchem-home.html"><strong>Tutorials in Physical Chemistry</strong></a> at <a href="http://www.chem.vt.edu/">Virginia Tech</a> (W3)</dd><dd>* <a href="http://smaug.ucr.edu/Unixhelp/TOP_.html"><strong>UNIXhelp</strong></a> for Users and <a href="http://pelican.cl.cam.ac.uk/htbin/man"><strong>UNIX Manual Pages</strong></a> (W3)</dd><dd>* <a href="http://www.ch.embnet.org/bio-www/archive/florianW3_1.html"><strong>WWW Introduction</strong></a> <strong>!Recent!</strong> at <a href="http://www.ch.embnet.org/">EMBNet-Basel</a>, Switzerland (W3)</dd></dl>
<p><a href="gopher://gopher.imb-jena.de/00/ftp/images/PROTEINS/amino_acids/amino_acid.txt"><strong>AA-Notations and Properties</strong></a> and <a href="gopher://gopher.imb-jena.de/11/ftp/images/PROTEINS/amino_acids"><strong>AA-Images with Atomic Numbering</strong></a> at <a href="http://www.imb-jena.de/">IMB-Jena</a>, Germany (Gopher) <a href="http://www.genome.ad.jp/htbin/bfind_aaindex"><strong>AA-Index</strong></a> - Amino Acid Index Database at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan and <a href="http://cammsg3.caos.kun.nl:8000/srs/srsc?-info+NAKAI"><strong>NAKAI</strong></a> <strong>!Recent!</strong> at<a href="http://cammsg3.caos.kun.nl:8000/">CAOS/CAMM</a>, The Netherlands (W3)</p>
