Difference between revisions of "Seongjun Hong"

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<h1><span style="font-size: x-large"><strong><b><span lang="EN-US">Bioinformatics</span></b></strong></span></h1>
 
<h1><span style="font-size: x-large"><strong><b><span lang="EN-US">Bioinformatics</span></b></strong></span></h1>
 
<p style="font-family: -apple-system-font; line-height: 16px"><span style="font-size: larger"><span lang="EN-US"><font size="4">In bioinformatics, all biological data are regarded as information. By combining various fields such as computer science and statistics, the information is analyzed and studied. </font></span></span></p>
 
<p style="font-family: -apple-system-font; line-height: 16px"><span style="font-size: larger"><span lang="EN-US"><font size="4">In bioinformatics, all biological data are regarded as information. By combining various fields such as computer science and statistics, the information is analyzed and studied. </font></span></span></p>
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<h1><span style="font-size: x-large"><strong><span lang="EN-US">Bioprogramming</span></strong></span></h1>
 
<h1><span style="font-size: x-large"><strong><span lang="EN-US">Bioprogramming</span></strong></span></h1>
 
<p style="font-family: -apple-system-font; line-height: 16px">&nbsp;</p>
 
<p style="font-family: -apple-system-font; line-height: 16px">&nbsp;</p>
<font size="4"><span style="font-size: larger"><span lang="EN-US">
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<p style="font-family: -apple-system-font; line-height: 16px">&nbsp;</p>
<p><b><em>My definition of Bioprogramming</em></b> is to synthesize new DNA strands with the aim of controlling a particular life function and of utilizing that function.</p>
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<p style="font-family: -apple-system-font; line-height: 16px"><span style="font-size: larger">&nbsp; <b><em>My definition of Bioprogramming</em></b> is to synthesize new DNA strands with the aim of controlling a particular life function and of utilizing that function.</span></p>
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<p style="font-family: -apple-system-font; line-height: 16px"><font size="4"><b><span style="font-size: larger"><span lang="EN-US">Bioprogramming </span></span></b><span style="font-size: larger"><span lang="EN-US">is all programming</span><span lang="EN-US">&nbsp;activities for analyzing biological data.</span></span></font></p>
 
<p style="font-family: -apple-system-font; line-height: 16px"><font size="4"><b><span style="font-size: larger"><span lang="EN-US">Bioprogramming </span></span></b><span style="font-size: larger"><span lang="EN-US">is all programming</span><span lang="EN-US">&nbsp;activities for analyzing biological data.</span></span></font></p>
 
<p style="font-family: -apple-system-font; line-height: 16px"><b><span lang="EN-US">&nbsp;</span></b></p>
 
<p style="font-family: -apple-system-font; line-height: 16px"><b><span lang="EN-US">&nbsp;</span></b></p>
 
<h2><span style="font-size: larger"><strong><b><span lang="EN-US">Programming</span></b></strong></span></h2>
 
<h2><span style="font-size: larger"><strong><b><span lang="EN-US">Programming</span></b></strong></span></h2>
<p style="font-family: -apple-system-font; line-height: 16px"><font size="4"><b><span style="font-size: larger"><span lang="EN-US">Programming </span></span></b><span style="font-size: larger"><span lang="EN-US">is a process that makes new algorithm from programming languages called codes through a compiler. It can convert a set of programming languages into executable programs. Programs can perform various activities like computation, analysis, algorithmic flow, and more. </span></span></font></p>
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<p style="font-family: -apple-system-font; line-height: 16px"><span style="font-size: medium"><b><span lang="EN-US">Programming </span></b><span lang="EN-US">is a process that makes new algorithm from programming languages called codes through a compiler. It can convert a set of programming languages into executable programs. Programs can perform various activities like computation, analysis, algorithmic flow, and more. </span></span></p>
<p style="font-family: -apple-system-font; line-height: 16px"><span style="font-size: larger"><span lang="EN-US"><font size="4">The <b>computer </b>is the electrical machine or device that carries out the programs. Computers exist in many different forms such as desktop, laptop, tablet, and etc. <br />
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<p style="font-family: -apple-system-font; line-height: 16px"><span style="font-size: medium"><span lang="EN-US">The <b>computer </b>is the electrical machine or device that carries out the programs. Computers exist in many different forms such as desktop, laptop, tablet, and etc. <br />
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<p style="font-family: -apple-system-font; line-height: 16px"><b><span lang="EN-US">&nbsp;</span></b></p>
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<p style="font-family: -apple-system-font; line-height: 16px"><span style="font-size: medium"><b><span lang="EN-US">&nbsp;</span></b></span></p>
<h3 style="margin-left: 40px"><span style="font-size: larger"><strong><b><span lang="EN-US">Compiler</span></b></strong></span></h3>
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<h2><span style="font-size: medium"><b><span lang="EN-US">What is reality??</span></b></span></h2>
<p style="font-family: -apple-system-font; margin-left: 40px; line-height: 16px"><font size="4"><b><span style="font-size: larger"><span lang="EN-US">Compiler </span></span></b><span style="font-size: larger"><span lang="EN-US">is a program that transforms programming languages into computer languages. With this process, computer can recognize the commands. The compilers have own specific programming language. C<sup>++</sup>, for example, has c language. They are classified according to the languages and the operating systems.</span></span></font></p>
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<p><span style="font-size: medium"><b><span lang="EN-US">Reality is something that actually exist or occur. If&nbsp;something&nbsp;does not exist&nbsp;or not&nbsp;occur, it is not real.&nbsp;&nbsp;</span></b></span></p>
<p style="font-family: -apple-system-font; line-height: 16px">&nbsp;</p>
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<h3 style="margin-left: 40px"><span style="font-size: larger"><strong><b><span lang="EN-US">Programming language</span></b></strong></span></h3>
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<p style="font-family: -apple-system-font; margin-left: 40px; line-height: 16px"><b><span style="font-size: larger"><span lang="EN-US"><font size="4">Programming languages </font></span></span></b><span style="font-size: larger"><span lang="EN-US"><font size="4">are generally high-level languages that are used in coding by programmers.If you compare the programming to a country, then the language is the communication medium. The 3 major types of bioprogramming languages are S, R, and Matlab. All of them are for statistical and computational use. <b>Grammar </b>is the rule of the languages.<br />
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<h1>Genomics</h1>
<p style="font-family: -apple-system-font; line-height: 16px">&nbsp;</p>
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<p>Genomics is a discipline in genetics analyzing the function and structure of genomes.</p>
<h2><span style="font-size: larger"><strong>Perl programming</strong></span></h2>
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<h2>Genome</h2>
<p><font size="4"><span style="font-size: larger">Perl is a programming language that supports scripts called a script lanuguage. It is developed by Larry wall in 1987. It is a powerful tool for varied applications such as network programming, finance, and bioinformatics.&nbsp;</span><span style="font-size: larger">An operating system of perl is basically Linux but almost systems support the program.&nbsp;</span></font></p>
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<p>Genome is a whole genetic materials of an organism such as DNA and RNA.</p>
<p><span style="font-size: larger"><a href="http://perl.org"><font size="4">site(perl.org)</font></a></span></p>
 
<p style="margin-left: 40px">&nbsp;</p>
 
<h3 style="margin-left: 40px"><span style="font-size: larger"><strong>BioPerl programming</strong></span></h3>
 
<p style="margin-left: 40px"><span style="font-size: larger"><font size="4">BioPerl is a collection of Perl modules for biological data processing. It is an open source software for biological applications in bioinformatics. In the Human Genome Project, the program has played a central role.</font></span></p>
 
<p style="margin-left: 40px"><span style="font-size: larger"><a href="http://bioperl.org"><font size="4">site(bioperl.org)</font></a></span></p>
 
<p style="margin-left: 40px">&nbsp;</p>
 
<h2><strong><span style="font-size: larger">BioOS</span></strong></h2>
 
<p><span style="font-size: larger"><font size="4">BioOS denotes an operationg system for bioinformatics</font></span></p>
 
<p><span style="font-size: larger"><a href="http://bioos.org"><font size="4">site(bioos.org)&nbsp;</font></a></span></p>
 
 
<p>&nbsp;</p>
 
<p>&nbsp;</p>
<h2><span style="font-size: larger"><strong>Other languages for Bioinformatics</strong></span></h2>
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<h1>Transcriptome</h1>
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<h2>Definition</h2>
    <li><span style="font-size: larger"><a href="http://en.wikipedia.org/wiki/R_(programming_language)"><font size="4">R</font></a></span></li>
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<p>Transcriptome is a set of all RNA molecules such as mRNA, rRNA, tRNA and non-coding RNA in one cell.</p>
    <li><a href="http://en.wikipedia.org/wiki/S_(programming_language)"><span style="font-size: larger"><font size="4">S</font></span></a></li>
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<h2>Feature</h2>
    <li><a href="http://en.wikipedia.org/wiki/MATLAB"><span style="font-size: larger"><font size="4">Matlab</font></span></a></li>
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<p>Unlike the genome which is fixed for a given cell line excluding mutation, the transcriptome can vary with environmental conditions. Because the genes expressed&nbsp;actively at given time is different.</p>
</ul>
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<p>Therefore, the transcriptome can be refer to expression profiling.</p>
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<h1>Proteomics</h1>
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<h2>Definition</h2>
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<p><strong>Proteomics</strong> is the large-scale study of <a title="Protein" href="http://en.wikipedia.org/wiki/Protein">proteins</a>, particularly their structures and functions.</p>
 
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Latest revision as of 02:24, 14 June 2015

 

 

 

Bioinformatics

In bioinformatics, all biological data are regarded as information. By combining various fields such as computer science and statistics, the information is analyzed and studied.

It is an interdisciplinary field that develops methods and software tools for understanding biological data.

 

Bioprogramming

 

 

  My definition of Bioprogramming is to synthesize new DNA strands with the aim of controlling a particular life function and of utilizing that function.

 

Bioprogramming is all programming activities for analyzing biological data.

 

Programming

Programming is a process that makes new algorithm from programming languages called codes through a compiler. It can convert a set of programming languages into executable programs. Programs can perform various activities like computation, analysis, algorithmic flow, and more.

The computer is the electrical machine or device that carries out the programs. Computers exist in many different forms such as desktop, laptop, tablet, and etc.

 

What is reality??

Reality is something that actually exist or occur. If something does not exist or not occur, it is not real.  

 

 

 

Genomics

Genomics is a discipline in genetics analyzing the function and structure of genomes.

Genome

Genome is a whole genetic materials of an organism such as DNA and RNA.

 

Transcriptome

Definition

Transcriptome is a set of all RNA molecules such as mRNA, rRNA, tRNA and non-coding RNA in one cell.

Feature

Unlike the genome which is fixed for a given cell line excluding mutation, the transcriptome can vary with environmental conditions. Because the genes expressed actively at given time is different.

Therefore, the transcriptome can be refer to expression profiling.

Proteomics

Definition

Proteomics is the large-scale study of proteins, particularly their structures and functions.