Difference between revisions of "Protein structure"

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imported>Chaeshinhyeok
(Created page with "<p>1. CCNL1</p> <p>* sequence : <br /> MSAAVFSRAKMAAGPLSVSSNASTNNDGILIGDKVYSEVYLTIDNSLIPEERLSPTPSML<br /> DGLDLNTETDLRILGCELIQSAGILLRLPQVAMATAQVLFHRFFYSKSFVKHSFEIVAMA<br />...")
 
imported>Chaeshinhyeok
 
(5 intermediate revisions by the same user not shown)
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<p>&nbsp;</p>
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<p>helix, sheet &gt;&gt; structure, maintaining</p>
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<p>coil &gt;&gt; bind, attacking</p>
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<p>1. CCNL1</p>
 
<p>1. CCNL1</p>
  
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<p>*structure<br />
 
<p>*structure<br />
 
<img alt="" src="/ckfinder/userfiles/images/CCNL1.jpg" style="height:535px; width:535px" /></p>
 
<img alt="" src="/ckfinder/userfiles/images/CCNL1.jpg" style="height:535px; width:535px" /></p>
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<p><img src="http://zhanglab.ccmb.med.umich.edu/I-TASSER/output/S274622/BFP.png" /></p>
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<p>2.&nbsp;bovine serum albumin&nbsp;[Bos taurus]</p>
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<p>* sequence</p>
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<p>MKWVTFISLLLLFSSAYSRGVFRRDTHKSEIAHRFKDLGEEHFKGLVLIAFSQYLQQCPF<br />
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DEHVKLVNELTEFAKTCVADESHAGCEKSLHTLFGDELCKVASLRETYGDMADCCEKQEP<br />
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ERNECFLSHKDDSPDLPKLKPDPNTLCDEFKADEKKFWGKYLYEIARRHPYFYAPELLYY<br />
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ANKYNGVFQECCQAEDKGACLLPKIETMREKVLTSSARQRLRCASIQKFGERALKAWSVA<br />
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RLSQKFPKAEFVEVTKLVTDLTKVHKECCHGDLLECADDRADLAKYICDNQDTISSKLKE<br />
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CCDKPLLEKSHCIAEVEKDAIPENLPPLTADFAEDKDVCKNYQEAKDAFLGSFLYEYSRR<br />
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HPEYAVSVLLRLAKEYEATLEECCAKDDPHACYSTVFDKLKHLVDEPQNLIKQNCDQFEK<br />
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LGEYGFQNALIVRYTRKVPQVSTPTLVEVSRSLGKVGTRCCTKPESERMPCTEDYLSLIL<br />
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NRLCVLHEKTPVSEKVTKCCTESLVNRRPCFSALTPDETYVPKAFDEKLFTFHADICTLP<br />
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DTEKQIKKQTALVELLKHKPKATEEQLKTVMENFVAFVDKCCAADDKEACFAVEGPKLVV<br />
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STQTALA</p>
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<p>*structure</p>
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<p>&nbsp;<img src="https://outlook.office.com/owa/service.svc/s/GetAttachmentThumbnail?id=AAMkADVjYWQ2NjQxLTQyODctNDdjZS05MmM0LTNjMzk3ODc3MTM0OQBGAAAAAAA3I84uOQdFT6OnWDrX5hxBBwAqh0Ua3X%2BoRZ%2BziOiYf7A0AAAAAAEMAACiUvzcfDkTSbk8wy3WjXoGAABGKY1nAAABEgAQAFrY%2FK6W8oBOrlvXDdky%2FJ8%3D&amp;thumbnailType=2&amp;X-OWA-CANARY=HoIQsoAfdE2XXR2KqNFVE7Agxq5GjdMY8a-5UNiPZQQwyAYdhF-whYfdtR1nrOmBuOQ-3JhyDok." /></p>
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<p><img src="http://zhanglab.ccmb.med.umich.edu/I-TASSER/output/S277260/BFP.png" /></p>
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<p>3.&nbsp;NAD [Oligotropha carboxidovorans OM5]</p>
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<p>* sequence</p>
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<p>MDKLPTHMTVIAISQPGGPDVLVPEQREVPKPAAGEILVKVEAAGVNRPDVLQRMGKYPV<br />
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PPGASDLPGLEIAGTVVALGEGARKHKIGDKVMSLTAGGGYAEYCVAPDAHAITIPAGLS<br />
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MKEAATLPETVMTVWHNVFERCALKPGETFMVHGGSSGIGTTAIQMAKAHGAKVIVTVGS<br />
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QEKADACVTLGADVAVNYKTQDFVAEAKAATGGKGVNVILDMVGGEYVDRNYDACATEGR<br />
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IVQIAFLGGPKATANFGKLMMKRLWHTGSTLRPRSNEDKAAMVKAIEATVLPWIVAGRLK<br />
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PLIDSEFSLKDAAKAHARMESGQHIGKIVLTV</p>
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<p>*structure</p>
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<p><img src="https://outlook.office.com/owa/service.svc/s/GetAttachmentThumbnail?id=AAMkADVjYWQ2NjQxLTQyODctNDdjZS05MmM0LTNjMzk3ODc3MTM0OQBGAAAAAAA3I84uOQdFT6OnWDrX5hxBBwAqh0Ua3X%2BoRZ%2BziOiYf7A0AAAAAAEMAACiUvzcfDkTSbk8wy3WjXoGAABGKY15AAABEgAQAARERnH7HghCjpICLAX1B6I%3D&amp;thumbnailType=2&amp;X-OWA-CANARY=1p8vMZJ7IEeTfNOb1ER7SSAX3YvIj9MYaFX0me6Zx-ayycy0ePldxp0epCR8DlVYEInRd-X-1Fw." /></p>
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<p><img src="http://zhanglab.ccmb.med.umich.edu/I-TASSER/output/S277574/BFP.png" /></p>
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<p>4.&nbsp;myoglobin&nbsp;[Homo sapiens]</p>
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<p>* sequence</p>
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<p>MGLSDGEWQLVLNVWGKVEADIPGHGQEVLIRLFKGHPETLEKFDKFKHLKSEDEMKASE<br />
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DLKKHGATVLTALGGILKKKGHHEAEIKPLAQSHATKHKIPVKYLEFISECIIQVLQSKH<br />
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PGDFGADAQGAMNKALELFRKDMASNYKELGFQG</p>
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<p>*structure</p>
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<p><img src="https://outlook.office.com/owa/service.svc/s/GetAttachmentThumbnail?id=AAMkADVjYWQ2NjQxLTQyODctNDdjZS05MmM0LTNjMzk3ODc3MTM0OQBGAAAAAAA3I84uOQdFT6OnWDrX5hxBBwAqh0Ua3X%2BoRZ%2BziOiYf7A0AAAAAAEMAACiUvzcfDkTSbk8wy3WjXoGAABHdwLyAAABEgAQAKD5dEV4XRhDkasSeVbqCtM%3D&amp;thumbnailType=2&amp;X-OWA-CANARY=73URokf1Fk2tAi_dGd9Y0jDuGmjZkNMYUjbAQmbdtmivAMgemxK0COq_xc4AtQm8YLSNpLMG4X0." /></p>
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<p><img src="http://zhanglab.ccmb.med.umich.edu/I-TASSER/output/S278089/BFP.png" /></p>
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<p>5.&nbsp;keratin&nbsp;[Pseudomonas aeruginosa]</p>
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<p>*sequence</p>
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<p>MVGQDVMRCLMALGLVLQGLSFGAQAAPGGAVELYRYVNDKGVVVLDRQGVPPQYIGKGY<br />
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QVLNDQGRVIRTVPPAPTAEELRQRKAAQAQASSDAQLLRLYSSLEDVDRARERRLAELD<br />
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GLSSVARGNLQSLKLQQANLQGQAANQERAGRPVAQALVDQLDDLKQEEKRLQGEIGRFQ<br />
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KAREDAERTYAADRARLSQLLGVSP</p>
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<p>*structure</p>
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<p><img src="https://outlook.office.com/owa/service.svc/s/GetAttachmentThumbnail?id=AAMkADVjYWQ2NjQxLTQyODctNDdjZS05MmM0LTNjMzk3ODc3MTM0OQBGAAAAAAA3I84uOQdFT6OnWDrX5hxBBwAqh0Ua3X%2BoRZ%2BziOiYf7A0AAAAAAEMAACiUvzcfDkTSbk8wy3WjXoGAABJauBDAAABEgAQAM3wuhUzdqdMm2okJbTvC4g%3D&amp;thumbnailType=2&amp;X-OWA-CANARY=zNZnPb6Op06HQlwZ7KsU2dAYQYP3kdMYVuM1_JJSiNn5-W0PvRAlpV1Sr5KqdHjmBxG-O9eeTEc." /></p>
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<p><img src="http://zhanglab.ccmb.med.umich.edu/I-TASSER/output/S278265/BFP.png" /></p>

Latest revision as of 21:58, 11 June 2016

 

helix, sheet >> structure, maintaining

coil >> bind, attacking

1. CCNL1

* sequence : 
MSAAVFSRAKMAAGPLSVSSNASTNNDGILIGDKVYSEVYLTIDNSLIPEERLSPTPSML
DGLDLNTETDLRILGCELIQSAGILLRLPQVAMATAQVLFHRFFYSKSFVKHSFEIVAMA
CINLASKIEEAPRRIRDVVNVFHHLRQIRCKKTPSSLILDQNYINTKNQVIKAERRILKE
LGFCVHVKHPHKIIVMYLQVLECEKNQTLVQTAWNYMNDSLRTNVFVRFQAETIACACIF
LAARALQIPLPSKPHWYLLFGASEDEIKDICITTLKLYTRKKPNYDHLEKEVERRKMFLA
EAKLKAKGLNPDGTPALSTLGGFSPASKPCSPSVVKVEEKSPNPQTLKPVKKEPDNRAQV
NKSPHNGLRKEVKIGRNSRSGSRSCSRTRSRSRSRSPRRHYNSRRSCSGTYSSRSRSRSH
SRSPSPRRHPPSPLLPHLKSKTSHHSNSDSKPSGRHSNSGGSGHKRKRSRSRSRSRTPVK
VDRERDRERERERDRERSSFDLSSKKHKHERGGHRGDRRERERSRSYDRERERERSHKSK
HHSSSGHSGHGRHRR

*structure

2. bovine serum albumin [Bos taurus]

* sequence

MKWVTFISLLLLFSSAYSRGVFRRDTHKSEIAHRFKDLGEEHFKGLVLIAFSQYLQQCPF
DEHVKLVNELTEFAKTCVADESHAGCEKSLHTLFGDELCKVASLRETYGDMADCCEKQEP
ERNECFLSHKDDSPDLPKLKPDPNTLCDEFKADEKKFWGKYLYEIARRHPYFYAPELLYY
ANKYNGVFQECCQAEDKGACLLPKIETMREKVLTSSARQRLRCASIQKFGERALKAWSVA
RLSQKFPKAEFVEVTKLVTDLTKVHKECCHGDLLECADDRADLAKYICDNQDTISSKLKE
CCDKPLLEKSHCIAEVEKDAIPENLPPLTADFAEDKDVCKNYQEAKDAFLGSFLYEYSRR
HPEYAVSVLLRLAKEYEATLEECCAKDDPHACYSTVFDKLKHLVDEPQNLIKQNCDQFEK
LGEYGFQNALIVRYTRKVPQVSTPTLVEVSRSLGKVGTRCCTKPESERMPCTEDYLSLIL
NRLCVLHEKTPVSEKVTKCCTESLVNRRPCFSALTPDETYVPKAFDEKLFTFHADICTLP
DTEKQIKKQTALVELLKHKPKATEEQLKTVMENFVAFVDKCCAADDKEACFAVEGPKLVV
STQTALA

*structure

 

3. NAD [Oligotropha carboxidovorans OM5]

* sequence

MDKLPTHMTVIAISQPGGPDVLVPEQREVPKPAAGEILVKVEAAGVNRPDVLQRMGKYPV
PPGASDLPGLEIAGTVVALGEGARKHKIGDKVMSLTAGGGYAEYCVAPDAHAITIPAGLS
MKEAATLPETVMTVWHNVFERCALKPGETFMVHGGSSGIGTTAIQMAKAHGAKVIVTVGS
QEKADACVTLGADVAVNYKTQDFVAEAKAATGGKGVNVILDMVGGEYVDRNYDACATEGR
IVQIAFLGGPKATANFGKLMMKRLWHTGSTLRPRSNEDKAAMVKAIEATVLPWIVAGRLK
PLIDSEFSLKDAAKAHARMESGQHIGKIVLTV

*structure

4. myoglobin [Homo sapiens]

* sequence

MGLSDGEWQLVLNVWGKVEADIPGHGQEVLIRLFKGHPETLEKFDKFKHLKSEDEMKASE
DLKKHGATVLTALGGILKKKGHHEAEIKPLAQSHATKHKIPVKYLEFISECIIQVLQSKH
PGDFGADAQGAMNKALELFRKDMASNYKELGFQG

*structure

5. keratin [Pseudomonas aeruginosa]

*sequence

MVGQDVMRCLMALGLVLQGLSFGAQAAPGGAVELYRYVNDKGVVVLDRQGVPPQYIGKGY
QVLNDQGRVIRTVPPAPTAEELRQRKAAQAQASSDAQLLRLYSSLEDVDRARERRLAELD
GLSSVARGNLQSLKLQQANLQGQAANQERAGRPVAQALVDQLDDLKQEEKRLQGEIGRFQ
KAREDAERTYAADRARLSQLLGVSP

*structure

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