Difference between revisions of "Homo sapiens catenin beta 1 (CTNNB1)"

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imported>위민우
imported>위민우
 
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<p>[[Perl Code]]</p>
+
<p><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">&gt;[[Perl Code of CTNNB1]]</span></span></p>
  
−
<p>[DNA sequence]</p>
+
<p>&nbsp;</p>
  
−
<p>ATGGCTACTCAA</p>
+
<p><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">[DNA sequence]</span></span></p>
  
−
<p>GCTGATTTGATGGAGTTGGACATGGCCATGGAACCAGACAGAAAAGCGGCTGTTAGTCACTGGCAGCAAC</p>
+
<p><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">ATGGCTACTCAA</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">GCTGATTTGATGGAGTTGGACATGGCCATGGAACCAGACAGAAAAGCGGCTGTTAGTCACTGGCAGCAAC</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">AGTCTTACCTGGACTCTGGAATCCATTCTGGTGCCACTACCACAGCTCCTTCT</span></span></p>
  
−
<p>AGTCTTACCTGGACTCTGGAATCCATTCTGGTGCCACTACCACAGCTCCTTCTCTGAGTGGTAAAGGCAA</p>
+
<p><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">CTGAGTGGTAAAGGCAA</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">TCCTGAGGAAGAGGATGTGGATACCTCCCAAGTCCTGTATGAGTGGGAACAGGGATTTTCTCAGTCCTTC</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">ACTCAAGAACAAGTAGCTGATATTGATGGACAGTATGCAATGACTCGAG</span></span></p>
  
−
<p>TCCTGAGGAAGAGGATGTGGATACCTCCCAAGTCCTGTATGAGTGGGAACAGGGATTTTCTCAGTCCTTC</p>
+
<p><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">CTCAGAGGGTACGAGCTGCTA</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">TGTTCCCTGAGACATTAGATGAGGGCATGCAGATCCCATCTACACAGTTTGATGCTGCTCATCCCACTAA</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">TGTCCAGCGTTTGGCTGAACCATCACAGATGCTGAAACATGCAGT</span></span></p>
  
−
<p>ACTCAAGAACAAGTAGCTGATATTGATGGACAGTATGCAATGACTCGAGCTCAGAGGGTACGAGCTGCTA</p>
+
<p><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">TGTAAACTTGATTAACTATCAAGAT</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">GATGCAGAACTTGCCACACGTGCAATCCCTGAACTGACAAAACTGCTAAATGACGAGGACCAGGTGGTGG</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">TTAATAAGGCTGCAGTTATGGTCCATCAGCTTTCTAAAAAGG</span></span></p>
  
−
<p>TGTTCCCTGAGACATTAGATGAGGGCATGCAGATCCCATCTACACAGTTTGATGCTGCTCATCCCACTAA</p>
+
<p><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">AAGCTTCCAGACACGCTATCATGCGTTC</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">TCCTCAGATGGTGTCTGCTATTGTACGTACCATGCAGAATACAAATGATGTAGAAACAGCTCGTTGTACC</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">GCTGGGACCTTGCATAACCTTTCCCATCATCGTGAGGGC</span></span></p>
  
−
<p>TGTCCAGCGTTTGGCTGAACCATCACAGATGCTGAAACATGCAGTTGTAAACTTGATTAACTATCAAGAT</p>
+
<p><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">TTACTGGCCATCTTTAAGTCTGGAGGCATTC</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">CTGCCCTGGTGAAAATGCTTGGTTCACCAGTGGATTCTGTGTTGTTTTATGCCATTACAACTCTCCACAA</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">CCTTTTATTACATCAAGAAGGAGCTAAAATGGCAGTG</span></span></p>
  
−
<p>GATGCAGAACTTGCCACACGTGCAATCCCTGAACTGACAAAACTGCTAAATGACGAGGACCAGGTGGTGG</p>
+
<p><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">CGTTTAGCTGGTGGGCTGCAGAAAATGGTTGCC</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">TTGCTCAACAAAACAAATGTTAAATTCTTGGCTATTACGACAGACTGCCTTCAAATTTTAGCTTATGGCA</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">ACCAAGAAAGCAAGCTCATCATACTGGCTAGTGGT</span></span></p>
  
−
<p>TTAATAAGGCTGCAGTTATGGTCCATCAGCTTTCTAAAAAGGAAGCTTCCAGACACGCTATCATGCGTTC</p>
+
<p><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">GGACCCCAAGCTTTAGTAAATATAATGAGGACCTA</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">TACTTACGAAAAACTACTGTGGACCACAAGCAGAGTGCTGAAGGTGCTATCTGTCTGCTCTAGTAATAAG</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">CCGGCTATTGTAGAAGCTGGTGGAATGCAAGC</span></span></p>
  
−
<p>TCCTCAGATGGTGTCTGCTATTGTACGTACCATGCAGAATACAAATGATGTAGAAACAGCTCGTTGTACC</p>
+
<p><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">TTTAGGACTTCACCTGACAGATCCAAGTCAACGTCTTG</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">TTCAGAACTGTCTTTGGACTCTCAGGAATCTTTCAGATGCTGCAACTAAACAGGAAGGGATGGAAGGTCT</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">CCTTGGGACTCTTGTTCAGCTTCTGGGT</span></span></p>
  
−
<p>GCTGGGACCTTGCATAACCTTTCCCATCATCGTGAGGGCTTACTGGCCATCTTTAAGTCTGGAGGCATTC</p>
+
<p><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">TCAGATGATATAAATGTGGTCACCTGTGCAGCTGGAATTCTT</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">TCTAACCTCACTTGCAATAATTATAAGAACAAGATGATGGTCTGCCAAGTGGGTGGTATAGAGGCTCTTG</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">TGCGTACTGTCCTTCGGGCTGGTGAC</span></span></p>
  
−
<p>CTGCCCTGGTGAAAATGCTTGGTTCACCAGTGGATTCTGTGTTGTTTTATGCCATTACAACTCTCCACAA</p>
+
<p><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">AGGGAAGACATCACTGAGCCTGCCATCTGTGCTCTTCGTCATCT</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">GACCAGCCGACACCAAGAAGCAGAGATGGCCCAGAATGCAGTTCGCCTTCACTATGGACTACCAGTTGTG</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">GTTAAGCTCTTACACCCACC</span></span></p>
  
−
<p>CCTTTTATTACATCAAGAAGGAGCTAAAATGGCAGTGCGTTTAGCTGGTGGGCTGCAGAAAATGGTTGCC</p>
+
<p><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">ATCCCACTGGCCTCTGATAAAGGCTACTGTTGGATTGATTCGAAATCTTG</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">CCCTTTGTCCCGCAAATCATGCACCTTTGCGTGAGCAGGGTGCCATTCCACGACTAGTTCAGTTGCTTGT</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">TCGTGCACATCAGGAT</span></span></p>
  
−
<p>TTGCTCAACAAAACAAATGTTAAATTCTTGGCTATTACGACAGACTGCCTTCAAATTTTAGCTTATGGCA</p>
+
<p><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">ACCCAGCGCCGTACGTCCATGGGTGGGACACAGCAGCAATTTGTGGAGGGGGTC</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">CGCATGGAAGAAATAGTTGAAGGTTGTACCGGAGCCCTTCACATCCTAGCTCGGGATGTTCACAACCGAA</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">TTGTTATCAG</span></span></p>
  
−
<p>ACCAAGAAAGCAAGCTCATCATACTGGCTAGTGGTGGACCCCAAGCTTTAGTAAATATAATGAGGACCTA</p>
+
<p><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">AGGACTAAATACCATTCCATTGTTTGTGCAGCTGCTTTATTCTCCCATTGAAAACATCCA</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">AAGAGTAGCTGCAGGGGTCCTCTGTGAACTTGCTCAGGACAAGGAAGCTGCAGAAGCTATTGAAGCTGAG</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">GGAGCC</span></span></p>
  
−
<p>TACTTACGAAAAACTACTGTGGACCACAAGCAGAGTGCTGAAGGTGCTATCTGTCTGCTCTAGTAATAAG</p>
+
<p><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">ACAGCTCCTCTGACAGAGTTACTTCACTCTAGGAATGAAGGTGTGGCGACATATGCAGCTGCTG</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">TTTTGTTCCGAATGTCTGAGGACAAGCCACAAGATTACAAGAAACGGCTTTCAGTTGAGCTGACCAGCTC</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">T</span></span></p>
  
−
<p>CCGGCTATTGTAGAAGCTGGTGGAATGCAAGCTTTAGGACTTCACCTGACAGATCCAAGTCAACGTCTTG</p>
+
<p><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">CTCTTCAGAACAGAGCCAATGGCTTGGAATGAGACTGCTGATCTTGGACTTGATATTGGTGCCCAGGGA</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">GAACCCCTTGGATATCGCCAGGATGATCCTAGCTATCGTTCTTTTCACTCTGGTGGATATGGCCAGG</span></span></p>
  
−
<p>TTCAGAACTGTCTTTGGACTCTCAGGAATCTTTCAGATGCTGCAACTAAACAGGAAGGGATGGAAGGTCT</p>
+
<p><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">ATG</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">CCTTGGGTATGGACCCCATGATGGAACATGAGATGGGTGGCCACCACCCTGGTGCTGACTATCCAGTTGA</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">TGGGCTGCCAGATCTGGGGCATGCCCAGGACCTCATGGATGGGCTGCCTCCAGGTGACAG</span></span></p>
  
−
<p>CCTTGGGACTCTTGTTCAGCTTCTGGGTTCAGATGATATAAATGTGGTCACCTGTGCAGCTGGAATTCTT</p>
+
<p><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">CAATCAGCTG</span></span><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">GCCTGGTTTGATACTGACCTGTAA</span></span></p>
  
−
<p>TCTAACCTCACTTGCAATAATTATAAGAACAAGATGATGGTCTGCCAAGTGGGTGGTATAGAGGCTCTTG</p>
+
<p>&nbsp;</p>
  
−
<p>TGCGTACTGTCCTTCGGGCTGGTGACAGGGAAGACATCACTGAGCCTGCCATCTGTGCTCTTCGTCATCT</p>
+
<p><span style="font-size:12px"><span style="font-family:arial,helvetica,sans-serif">[Amino acid sequence]</span></span></p>
  
−
<p>GACCAGCCGACACCAAGAAGCAGAGATGGCCCAGAATGCAGTTCGCCTTCACTATGGACTACCAGTTGTG</p>
+
<p>MATQADLMELDMAMEPDRKAAVSHWQQQSYLDSGIHSGATTTAPSLSGKGNPEEEDVDTSQVLYEWEQGFSQSFTQEQVADIDGQYAMTRAQRVRAAMFPETLDEGMQIPSTQFDAAHPTNVQRLAEPSQMLKH</p>
  
−
<p>GTTAAGCTCTTACACCCACCATCCCACTGGCCTCTGATAAAGGCTACTGTTGGATTGATTCGAAATCTTG</p>
+
<p>AVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAV</p>
  
−
<p>CCCTTTGTCCCGCAAATCATGCACCTTTGCGTGAGCAGGGTGCCATTCCACGACTAGTTCAGTTGCTTGT</p>
+
<p>RLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDI</p>
  
−
<p>TCGTGCACATCAGGATACCCAGCGCCGTACGTCCATGGGTGGGACACAGCAGCAATTTGTGGAGGGGGTC</p>
+
<p>NVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSM</p>
  
−
<p>CGCATGGAAGAAATAGTTGAAGGTTGTACCGGAGCCCTTCACATCCTAGCTCGGGATGTTCACAACCGAA</p>
+
<p>GGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMSEDKPQDYKKRLSVELTSSLFRTEPMAWNETADL</p>
  
−
<p>TTGTTATCAGAGGACTAAATACCATTCCATTGTTTGTGCAGCTGCTTTATTCTCCCATTGAAAACATCCA</p>
+
<p>GLDIGAQGEPLGYRQDDPSYRSFHSGGYGQDALGMDPMMEHEMG GHHPGADYPVDGLPDLGHAQDLMDGLPPGDSNQLAWFDTDL</p>
  
−
<p>AAGAGTAGCTGCAGGGGTCCTCTGTGAACTTGCTCAGGACAAGGAAGCTGCAGAAGCTATTGAAGCTGAG</p>
+
<p>&nbsp;</p>
  
−
<p>GGAGCCACAGCTCCTCTGACAGAGTTACTTCACTCTAGGAATGAAGGTGTGGCGACATATGCAGCTGCTG</p>
+
<p>[Second structure]</p>
  
−
<p>TTTTGTTCCGAATGTCTGAGGACAAGCCACAAGATTACAAGAAACGGCTTTCAGTTGAGCTGACCAGCTC</p>
+
<p>http://www.compbio.dundee.ac.uk/jpred4/results/jp_RZOdinb/jp_RZOdinb.results.html</p>
  
−
<p>TCTCTTCAGAACAGAGCCAATGGCTTGGAATGAGACTGCTGATCTTGGACTTGATATTGGTGCCCAGGGA</p>
+
<p>Simple result : (<span style="color:#FF0000">H</span>=alpha helix <span style="color:#DAA520">E</span>=beta sheet)</p>
  
−
<p>GAACCCCTTGGATATCGCCAGGATGATCCTAGCTATCGTTCTTTTCACTCTGGTGGATATGGCCAGGATG</p>
+
<p><code>----------------<span style="color:#FF0000">HHHHHHHHHH</span>-----------------------------------<span style="color:#FF0000">HHH</span>---------------<span style="color:#FF0000">HHHHHHHHHHH</span>-------<span style="color:#FF0000">HH-HHHHHH</span>-------------<span style="color:#FF0000">HHHHHHH-HHHHHHHHHHHHHH</span>----<span style="color:#FF0000">HHHHHHHHHHHHHHH</span>----<span style="color:#FF0000">HHHHHHHHHHHHHHH</span>-----<span style="color:#FF0000">HHHHHH</span>---<span style="color:#FF0000">HHHHHHHHH</span>------<span style="color:#FF0000">HHHHHHHHHHHHHH</span>-----<span style="color:#FF0000">HHHHH</span>-----<span style="color:#FF0000">HHHHHH</span>-----<span style="color:#FF0000">HHHHHHHHHHHHHH</span>--------<span style="color:#FF0000">HHHHHH</span>---<span style="color:#FF0000">HHHHHH</span>-------<span style="color:#DAA520">EE</span><span style="color:#FF0000">HHHHHHHHH</span>---------<span style="color:#DAA520">EEEE</span>-----<span style="color:#FF0000">HHHHHHHH</span>----<span style="color:#FF0000">HHHHHHHHHHH</span>------------------<span style="color:#FF0000">HHHHHHHH</span>---<span style="color:#FF0000">HHHHHHHHHHHHHH</span>--------<span style="color:#FF0000">HHHHHHHHHHHH</span>--------<span style="color:#FF0000">HHHHHHHHH</span>------------<span style="color:#DAA520">E</span>------<span style="color:#FF0000">HHHHHHHHH</span>--------------------------------------<span style="color:#FF0000">HHHHH</span>--------<span style="color:#FF0000">HHHHHHHHHHHHHHHH</span>--------------<span style="color:#FF0000">HHHHHHHHHH</span>-<span style="color:#FF0000">HHHHHH</span>--------------<span style="color:#FF0000">HHHHHHHHHHHHHHH</span>-------<span style="color:#FF0000">HHHHH</span>----<span style="color:#FF0000">HHHHHHHH</span>----<span style="color:#FF0000">HHHHHHHHHHHHHHH</span>---<span style="color:#FF0000">HHHHHHHH</span>----<span style="color:#FF0000">HHHHHHH</span>-----<span style="color:#FF0000">HHHHHHHHHHHHH</span>-----<span style="color:#FF0000">HHHHHHHHHH</span>---<span style="color:#FF0000">HH</span>--------<span style="color:#FF0000">HHHHHH</span>-------------------------------------------------------------------------------------</code></p>
  
−
<p>CCTTGGGTATGGACCCCATGATGGAACATGAGATGGGTGGCCACCACCCTGGTGCTGACTATCCAGTTGA</p>
+
<p>________________________________________________________________________________________________________________________________________________________________________________________________________</p>
  
−
<p>TGGGCTGCCAGATCTGGGGCATGCCCAGGACCTCATGGATGGGCTGCCTCCAGGTGACAGCAATCAGCTG</p>
+
<p>[[H.W.1]]</p>
−
 
 
−
<p>GCCTGGTTTGATACTGACCTGTAA</p>
 
−
 
 
−
<p>[Amino acid sequence]</p>
 
−
 
 
−
<pre>
 
−
MATQADLMELDMAMEPDRKAAVSHWQQQSYLDSGIHSGATTTAP
 
−
SLSGKGNPEEEDVDTSQVLYEWEQGFSQSFTQEQVADIDGQYAMTRAQRVRAAMFPET
 
−
LDEGMQIPSTQFDAAHPTNVQRLAEPSQMLKHAVVNLINYQDDAELATRAIPELTKLL
 
−
NDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTL
 
−
HNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLA
 
−
GGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYE
 
−
KLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAA
 
−
TKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRT
 
−
VLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIK
 
−
ATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSMGGTQQQFVEGVRM
 
−
EEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQD
 
−
KEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMSEDKPQDYKKRLSVELTSSL
 
−
FRTEPMAWNETADLGLDIGAQGEPLGYRQDDPSYRSFHSGGYGQDALGMDPMMEHEMG
 
−
GHHPGADYPVDGLPDLGHAQDLMDGLPPGDSNQLAWFDTDL</pre>
 

Latest revision as of 11:52, 26 May 2016

>Perl Code of CTNNB1

 

[DNA sequence]

ATGGCTACTCAAGCTGATTTGATGGAGTTGGACATGGCCATGGAACCAGACAGAAAAGCGGCTGTTAGTCACTGGCAGCAACAGTCTTACCTGGACTCTGGAATCCATTCTGGTGCCACTACCACAGCTCCTTCT

CTGAGTGGTAAAGGCAATCCTGAGGAAGAGGATGTGGATACCTCCCAAGTCCTGTATGAGTGGGAACAGGGATTTTCTCAGTCCTTCACTCAAGAACAAGTAGCTGATATTGATGGACAGTATGCAATGACTCGAG

CTCAGAGGGTACGAGCTGCTATGTTCCCTGAGACATTAGATGAGGGCATGCAGATCCCATCTACACAGTTTGATGCTGCTCATCCCACTAATGTCCAGCGTTTGGCTGAACCATCACAGATGCTGAAACATGCAGT

TGTAAACTTGATTAACTATCAAGATGATGCAGAACTTGCCACACGTGCAATCCCTGAACTGACAAAACTGCTAAATGACGAGGACCAGGTGGTGGTTAATAAGGCTGCAGTTATGGTCCATCAGCTTTCTAAAAAGG

AAGCTTCCAGACACGCTATCATGCGTTCTCCTCAGATGGTGTCTGCTATTGTACGTACCATGCAGAATACAAATGATGTAGAAACAGCTCGTTGTACCGCTGGGACCTTGCATAACCTTTCCCATCATCGTGAGGGC

TTACTGGCCATCTTTAAGTCTGGAGGCATTCCTGCCCTGGTGAAAATGCTTGGTTCACCAGTGGATTCTGTGTTGTTTTATGCCATTACAACTCTCCACAACCTTTTATTACATCAAGAAGGAGCTAAAATGGCAGTG

CGTTTAGCTGGTGGGCTGCAGAAAATGGTTGCCTTGCTCAACAAAACAAATGTTAAATTCTTGGCTATTACGACAGACTGCCTTCAAATTTTAGCTTATGGCAACCAAGAAAGCAAGCTCATCATACTGGCTAGTGGT

GGACCCCAAGCTTTAGTAAATATAATGAGGACCTATACTTACGAAAAACTACTGTGGACCACAAGCAGAGTGCTGAAGGTGCTATCTGTCTGCTCTAGTAATAAGCCGGCTATTGTAGAAGCTGGTGGAATGCAAGC

TTTAGGACTTCACCTGACAGATCCAAGTCAACGTCTTGTTCAGAACTGTCTTTGGACTCTCAGGAATCTTTCAGATGCTGCAACTAAACAGGAAGGGATGGAAGGTCTCCTTGGGACTCTTGTTCAGCTTCTGGGT

TCAGATGATATAAATGTGGTCACCTGTGCAGCTGGAATTCTTTCTAACCTCACTTGCAATAATTATAAGAACAAGATGATGGTCTGCCAAGTGGGTGGTATAGAGGCTCTTGTGCGTACTGTCCTTCGGGCTGGTGAC

AGGGAAGACATCACTGAGCCTGCCATCTGTGCTCTTCGTCATCTGACCAGCCGACACCAAGAAGCAGAGATGGCCCAGAATGCAGTTCGCCTTCACTATGGACTACCAGTTGTGGTTAAGCTCTTACACCCACC

ATCCCACTGGCCTCTGATAAAGGCTACTGTTGGATTGATTCGAAATCTTGCCCTTTGTCCCGCAAATCATGCACCTTTGCGTGAGCAGGGTGCCATTCCACGACTAGTTCAGTTGCTTGTTCGTGCACATCAGGAT

ACCCAGCGCCGTACGTCCATGGGTGGGACACAGCAGCAATTTGTGGAGGGGGTCCGCATGGAAGAAATAGTTGAAGGTTGTACCGGAGCCCTTCACATCCTAGCTCGGGATGTTCACAACCGAATTGTTATCAG

AGGACTAAATACCATTCCATTGTTTGTGCAGCTGCTTTATTCTCCCATTGAAAACATCCAAAGAGTAGCTGCAGGGGTCCTCTGTGAACTTGCTCAGGACAAGGAAGCTGCAGAAGCTATTGAAGCTGAGGGAGCC

ACAGCTCCTCTGACAGAGTTACTTCACTCTAGGAATGAAGGTGTGGCGACATATGCAGCTGCTGTTTTGTTCCGAATGTCTGAGGACAAGCCACAAGATTACAAGAAACGGCTTTCAGTTGAGCTGACCAGCTCT

CTCTTCAGAACAGAGCCAATGGCTTGGAATGAGACTGCTGATCTTGGACTTGATATTGGTGCCCAGGGAGAACCCCTTGGATATCGCCAGGATGATCCTAGCTATCGTTCTTTTCACTCTGGTGGATATGGCCAGG

ATGCCTTGGGTATGGACCCCATGATGGAACATGAGATGGGTGGCCACCACCCTGGTGCTGACTATCCAGTTGATGGGCTGCCAGATCTGGGGCATGCCCAGGACCTCATGGATGGGCTGCCTCCAGGTGACAG

CAATCAGCTGGCCTGGTTTGATACTGACCTGTAA

 

[Amino acid sequence]

MATQADLMELDMAMEPDRKAAVSHWQQQSYLDSGIHSGATTTAPSLSGKGNPEEEDVDTSQVLYEWEQGFSQSFTQEQVADIDGQYAMTRAQRVRAAMFPETLDEGMQIPSTQFDAAHPTNVQRLAEPSQMLKH

AVVNLINYQDDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAV

RLAGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDI

NVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPPSHWPLIKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTQRRTSM

GGTQQQFVEGVRMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQRVAAGVLCELAQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMSEDKPQDYKKRLSVELTSSLFRTEPMAWNETADL

GLDIGAQGEPLGYRQDDPSYRSFHSGGYGQDALGMDPMMEHEMG GHHPGADYPVDGLPDLGHAQDLMDGLPPGDSNQLAWFDTDL

 

[Second structure]

http://www.compbio.dundee.ac.uk/jpred4/results/jp_RZOdinb/jp_RZOdinb.results.html

Simple result : (H=alpha helix E=beta sheet)

----------------HHHHHHHHHH-----------------------------------HHH---------------HHHHHHHHHHH-------HH-HHHHHH-------------HHHHHHH-HHHHHHHHHHHHHH----HHHHHHHHHHHHHHH----HHHHHHHHHHHHHHH-----HHHHHH---HHHHHHHHH------HHHHHHHHHHHHHH-----HHHHH-----HHHHHH-----HHHHHHHHHHHHHH--------HHHHHH---HHHHHH-------EEHHHHHHHHH---------EEEE-----HHHHHHHH----HHHHHHHHHHH------------------HHHHHHHH---HHHHHHHHHHHHHH--------HHHHHHHHHHHH--------HHHHHHHHH------------E------HHHHHHHHH--------------------------------------HHHHH--------HHHHHHHHHHHHHHHH--------------HHHHHHHHHH-HHHHHH--------------HHHHHHHHHHHHHHH-------HHHHH----HHHHHHHH----HHHHHHHHHHHHHHH---HHHHHHHH----HHHHHHH-----HHHHHHHHHHHHH-----HHHHHHHHHH---HH--------HHHHHH-------------------------------------------------------------------------------------

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H.W.1

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