Difference between revisions of "Homo sapiens Lamin B"
imported>위민우 (Created page with "<p>>Perl Code of Lamin B</p> <p> </p> <p>[DNA sequence]</p> <p><span style="font-family:arial,helvetica,sans-serif"><span style="font-size:12px">ATGGCGACTGCGACCCCC...") |
imported>위민우 |
||
| Line 51: | Line 51: | ||
<p>[Second structure]</p> | <p>[Second structure]</p> | ||
| − | <p> </p> | + | <p>http://www.compbio.dundee.ac.uk/jpred4/results/jp_4Nu3t02/jp_4Nu3t02.results.html</p> |
| + | |||
| + | <p>Simple result : (<span style="color:#FF0000">H</span>=alpha helix <span style="color:#DAA520">E</span>=beta sheet)</p> | ||
| + | |||
| + | <p><code>------------------------<span style="color:#FF0000">HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH</span>------------<span style="color:#FF0000">HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH</span>-<span style="color:#FF0000">H</span><span style="color:#DAA520">EEEE</span>---------<span style="color:#FF0000">HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH</span>-<span style="color:#FF0000">HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH</span>----------------------------------------------<span style="color:#DAA520">EEEEEEE</span>------<span style="color:#DAA520">EEEEEE</span>-----<span style="color:#DAA520">EEEEEE</span>----<span style="color:#DAA520">EEE</span>---<span style="color:#DAA520">EEEEEE</span>----<span style="color:#DAA520">EEEEEE</span>---<span style="color:#DAA520">EEEE</span>---<span style="color:#DAA520">EEEEEE</span>-------------<span style="color:#DAA520">EE</span>----------<span style="color:#DAA520">EEEEEEE</span>-----<span style="color:#DAA520">EEEEEEEEEEEEEE</span>------<span style="color:#DAA520">EE</span>------<span style="color:#DAA520">EEEEE</span>------------<span style="color:#DAA520">EEE</span>-</code></p> | ||
<p>__________________________________________________________________________________________________________________________________________________________________________________________</p> | <p>__________________________________________________________________________________________________________________________________________________________________________________________</p> | ||
<p>[[H.W.1]]</p> | <p>[[H.W.1]]</p> | ||
Latest revision as of 13:23, 26 May 2016
[DNA sequence]
ATGGCGACTGCGACCCCCGTGCCGCCGCGGATGGGCAGCCGCGCTGGCGGCCCCACCACGCCGCTGAGCCCCACGCGCCTGTCGCGGCTCCAGGAGAAGGAGGAGCTGCGCGAGCTCAATGACCGGCT
GGCGGTGTACATCGACAAGGTGCGCAGCCTGGAGACGGAGAACAGCGCGCTGCAGCTGCAGGTGACGGAGCGCGAGGAGGTGCGCGGCCGTGAGCTCACCGGCCTCAAGGCGCTCTACGAGACCGAGCT
GGCCGACGCGCGACGCGCGCTCGACGACACGGCCCGCGAGCGCGCCAAGCTGCAGATCGAGCTGGGCAAGTGCAAGGCGGAACACGACCAGCTGCTCCTCAACTATGCTAAGAAGGAATCTGATCTTAATG
GCGCCCAGATCAAGCTTCGAGAATATGAAGCAGCACTGAATTCGAAAGATGCAGCTCTTGCTACTGCACTTGGTGACAAAAAAAGTTTAGAGGGAGATTTGGAGGATCTGAAGGATCAGATTGCCCAGTTGGAAG
CCTCCTTAGCTGCAGCCAAAAAACAGTTAGCAGATGAAACTTTACTTAAAGTAGATTTGGAGAATCGTTGTCAGAGCCTTACTGAGGACTTGGAGTTTCGCAAAAGCATGTATGAAGAGGAGATTAACGAGACCAGA
AGGAAGCATGAAACGCGCTTGGTAGAGGTGGATTCTGGGCGTCAAATTGAGTATGAGTACAAGCTGGCGCAAGCCCTTCATGAGATGAGAGAGCAACATGATGCCCAAGTGAGGCTGTATAAGGAGGAGCTGGA
GCAGACTTACCATGCCAAACTTGAGAATGCCAGACTGTCATCAGAGATGAATACTTCTACTGTCAACAGTGCCAGGGAAGAACTGATGGAAAGCCGCATGAGAATTGAGAGCCTTTCATCCCAGCTTTCTAATCTA
CAGAAAGAGTCTAGAGCATGTTTGGAAAGGATTCAAGAATTAGAGGACTTGCTTGCTAAAGAAAAAGACAACTCTCGTCGCATGCTGACAGACAAAGAGAGAGAGATGGCGGAAATAAGGGATCAAATGCAGCAA
CAGCTGAATGACTATGAACAGCTTCTTGATGTAAAGTTAGCCCTGGACATGGAAATCAGTGCTTACAGGAAACTCTTAGAAGGCGAAGAAGAGAGGTTGAAGCTGTCTCCAAGCCCTTCTTCCCGTGTGACAGTAT
CCCGAGCATCCTCAAGTCGTAGTGTACGTACAACTAGAGGAAAGCGGAAGAGGGTTGATGTGGAAGAATCAGAGGCGAGTAGTAGTGTTAGCATCTCTCATTCCGCCTCAGCCACTGGAAATGTTTGCATCGAAG
AAATTGATGTTGATGGGAAATTTATCCGCTTGAAGAACACTTCTGAACAGGATCAACCAATGGGAGGCTGGGAGATGATCAGAAAAATTGGAGACACATCAGTCAGTTATAAATATACCTCAAGATATGTGCTGAAGG
CAGGCCAGACTGTTACAATTTGGGCTGCAAACGCTGGTGTCACAGCCAGCCCCCCAACTGACCTCATCTGGAAGAACCAGAACTCGTGGGGCACTGGCGAAGATGTGAAGGTTATATTGAAAAATTCTCAGGGA
GAGGAGGTTGCTCAAAGAAGTACAGTCTTTAAAACAACCATACCTGAAGAAGAGGAGGAGGAGGAAGAAGCAGCTGGAGTGGTTGTTGAGGAAGAACTTTTCCACCAGCAGGGAACCCCAAGAGCATCCAATAG
AAGCTGTGCAATTATGTAA
[Amino acid sequence]
MATATPVPPRMGSRAGGPTTPLSPTRLSRLQEKEELRELNDRLAVYIDKVRSLETENSALQLQVTEREEVRGRELTGLKALYETELADARRALDDTARERAKLQIELGKCKAEHDQLLLNYAKKESDLNGAQIKLREYE
AALNSKDAALATALGDKKSLEGDLEDLKDQIAQLEASLAAAKKQLADETLLKVDLENRCQSLTEDLEFRKSMYEEEINETRRKHETRLVEVDSGRQIEYEYKLAQALHEMREQHDAQVRLYKEELEQTYHAKLENARLS
SEMNTSTVNSAREELMESRMRIESLSSQLSNLQKESRACLERIQELEDLLAKEKDNSRRMLTDKEREMAEIRDQMQQQLNDYEQLLDVKLALDMEISAYRKLLEGEEERLKLSPSPSSRVTVSRASSSRSVRTTRGK
RKRVDVEESEASSSVSISHSASATGNVCIEEIDVDGKFIRLKNTSEQDQPMGGWEMIRKIGDTSVSYKYTSRYVLKAGQTVTIWAANAGVTASPPTDLIWKNQNSWGTGEDVKVILKNSQGEEVAQRSTVFKTTIPEEEE
EEEEAAGVVVEEELFHQQGTPRASNRSCAIM
[Second structure]
http://www.compbio.dundee.ac.uk/jpred4/results/jp_4Nu3t02/jp_4Nu3t02.results.html
Simple result : (H=alpha helix E=beta sheet)
------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HEEEE---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------------------------EEEEEEE------EEEEEE-----EEEEEE----EEE---EEEEEE----EEEEEE---EEEE---EEEEEE-------------EE----------EEEEEEE-----EEEEEEEEEEEEEE------EE------EEEEE------------EEE-
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