Difference between revisions of "BRCA1"

From Biolecture.org
imported>Youyoung Kim
imported>Youyoung Kim
 
(One intermediate revision by the same user not shown)
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<p><a href="http://www.compbio.dundee.ac.uk/jpred4/results/jp_pOWsY7j/jp_pOWsY7j.simple.html">http://www.compbio.dundee.ac.uk/jpred4/results/jp_pOWsY7j/jp_pOWsY7j.simple.html</a></p>
 
<p><a href="http://www.compbio.dundee.ac.uk/jpred4/results/jp_pOWsY7j/jp_pOWsY7j.simple.html">http://www.compbio.dundee.ac.uk/jpred4/results/jp_pOWsY7j/jp_pOWsY7j.simple.html</a></p>
  
−
<p>&nbsp;</p>
+
<p><a href="http://www.compbio.dundee.ac.uk/jpred4/results/jp_U3PpvGT/jp_U3PpvGT.simple.html">http://www.compbio.dundee.ac.uk/jpred4/results/jp_U3PpvGT/jp_U3PpvGT.simple.html</a></p>
 +
 
 +
<p><a href="http://www.compbio.dundee.ac.uk/jpred4/results/jp_cbRrRrH/jp_cbRrRrH.simple.html">http://www.compbio.dundee.ac.uk/jpred4/results/jp_cbRrRrH/jp_cbRrRrH.simple.html</a></p>
 +
 
 +
<h2 style="font-style: italic"><big><span style="font-size:14px">H: Alpha helix, E: Beta sheet</span></big><br />
 +
<span style="font-size:11px"><code>-----HHHHHHHHHHHHHHHH-------HH------------HHHHHHHHHHHH-----------------------HHHHHHHHHHHHHHHH----------------------HHH--</code></span></h2>
 +
 
 +
<h2 style="font-style: italic"><span style="font-size:11px"><code>--EEEE------HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH----EEEEEE----HHHHHHHHHHHHHHHHH-----HHHHHHHHHH-HHHHHH---------------</code></span></h2>
 +
 
 +
<h2 style="font-style: italic"><span style="font-size:11px"><code>-------HHHHHHHH----------------------------------EEE----------------------------------------------EEE-------------------</code></span></h2>
 +
 
 +
<h2 style="font-style: italic"><span style="font-size:11px"><code>-----------HHHHHHHHHHHHHHHH---------------------------------------------------EEEE----------------EEEEEEEE--------------</code></span></h2>
 +
 
 +
<h2 style="font-style: italic"><span style="font-size:11px"><code>----------------------------------------EEEEE-------------------EEEE----------------------------------------------------</code></span></h2>
 +
 
 +
<h2 style="font-style: italic"><span style="font-size:11px"><code>----------------------EEE-----------------------------------------------------------------------------------------------</code></span></h2>
 +
 
 +
<h2 style="font-style: italic"><span style="font-size:11px"><code>--------------EEE----------HHHHH----------------EEEE----</code>------EEEE------------------EEEE--------------------------------HHH----------HHHHHHHHHH--</span></h2>
  
−
<p>&nbsp;</p>
+
<h2 style="font-style: italic"><span style="font-size:11px">----------------EEE--------------------HHHHH----------------------------------EEEEE-----------------E---------------------EEEEE--------------------EE---------------------------------</span></h2>
  
−
<p><span style="font-size:14px">H: Alpha helix, E: Beta sheet</span><br />
+
<h2 style="font-style: italic"><span style="font-size:11px">-----------EEEE------EEE-------EE---------------------------EE------EEEE-----------------------------------------------------EEEEE------E-----------------------------------------HHH</span></h2>
−
<code>-----HHHHHHHHHHHHHHHH-------HH------------HHHHHHHHHHHH-----------------------HHHHHHHHHHHHHHHH----------------------HHH--</code></p>
 
  
−
<p><code>--EEEE------HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH----EEEEEE----HHHHHHHHHHHHHHHHH-----HHHHHHHHHH-HHHHHH---------------</code></p>
+
<h2 style="font-style: italic"><span style="font-size:11px">HHH----------------EEEE----------------------------------------------------HH-----------<code>---------------------------------------------------EEE--------</code></span></h2>
  
−
<p><code>-------HHHHHHHH----------------------------------EEE----------------------------------------------EEE-------------------</code></p>
+
<h2 style="font-style: italic"><span style="font-size:11px"><code>--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------------EEE-----------------------------------------</code></span></h2>
  
−
<p><code>-----------HHHHHHHHHHHHHHHH---------------------------------------------------EEEE----------------EEEEEEEE--------------</code></p>
+
<h2 style="font-style: italic"><span style="font-size:11px"><code>------------------------------------------------------------------------------------------------------------------------</code></span></h2>
  
−
<p><code>----------------------------------------EEEEE-------------------EEEE----------------------------------------------------</code></p>
+
<h2 style="font-style: italic"><span style="font-size:11px"><code>------------------------------EEEEEEE----HHHHHHHHHHHH---EEE--------EEEEE------EHHHHHHHHHHH-------HHHHHHHHHH---------E---</code></span></h2>
  
−
<p><code>----------------------EEE-----------------------------------------------------------------------------------------------</code></p>
+
<h2 style="font-style: italic"><code><span style="font-size:11px">----------HHHHHHH---------EEEEEE------HHHHHHHHHH---EEE-------------EEEEEE-----HHHHHHHHHH-----EE-HHHHHHHHHH-------------------</span></code><br />
 +
&nbsp;</h2>
  
−
<p><code>--------------EEE----------HHHHH----------------EEEE----</code><br />
+
<p>&nbsp;</p>
−
&nbsp;</p>
 
  
 
<p>&nbsp;</p>
 
<p>&nbsp;</p>
  
 
<p>&nbsp;</p>
 
<p>&nbsp;</p>

Latest revision as of 15:13, 13 June 2016

  <DNA>

ATGGATTTATCTGCTCTTCGCGTTGAAGAAGTACAAAATGTCATTAATGCTATGCAGAAAATCTTAGAGTGTCCCATCTGTCTGGAGTTGATCAAGGAACCTGTCTCCACAA

AGTGTGACCACATATTTTGCAAATTTTGCATGCTGAAACTTCTCAACCAGAAGAAAGGGCCTTCACAGTGTCCTTTATGTAAGAATGATATAACCAAAAGGAGCCTACAAG

AAAGTACGAGATTTAGTCAACTTGTTGAAGAGCTATTGAAAATCATTTGTGCTTTTCAGCTTGACACAGGTTTGGAGTATGCAAACAGCTATAATTTTGCAAAAAAGGAAA

ATAACTCTCCTGAACATCTAAAAGATGAAGTTTCTATCATCCAAAGTATGGGCTACAGAAACCGTGCCAAAAGACTTCTACAGAGTGAACCCGAAAATCCTTCCTTGCAGG

AAACCAGTCTCAGTGTCCAACTCTCTAACCTTGGAACTGTGAGAACTCTGAGGACAAAGCAGCGGATACAACCTCAAAAGACGTCTGTCTACATTGAATTGGGATCTGAT

TCTTCTGAAGATACCGTTAATAAGGCAACTTATTGCAGTGTGGGAGATCAAGAATTGTTACAAATCACCCCTCAAGGAACCAGGGATGAAATCAGTTTGGATTCTGCAAAAA

AGGCTGCTTGTGAATTTTCTGAGACGGATGTAACAAATACTGAACATCATCAACCCAGTAATAATGATTTGAACACCACTGAGAAGCGTGCAGCTGAGAGGCATCCAGAA

AAGTATCAGGGTAGTTCTGTTTCAAACTTGCATGTGGAGCCATGTGGCACAAATACTCATGCCAGCTCATTACAGCATGAGAACAGCAGTTTATTACTCACTAAAGACAGAA

TGAATGTAGAAAAGGCTGAATTCTGTAATAAAAGCAAACAGCCTGGCTTAGCAAGGAGCCAACATAACAGATGGGCTGGAAGTAAGGAAACATGTAATGATAGGCGGAC

TCCCAGCACAGAAAAAAAGGTAGATCTGAATGCTGATCCCCTGTGTGAGAGAAAAGAATGGAATAAGCAGAAACTGCCATGCTCAGAGAATCCTAGAGATACTGAAGATG

TTCCTTGGATAACACTAAATAGCAGCATTCAGAAAGTTAATGAGTGGTTTTCCAGAAGTGATGAACTGTTAGGTTCTGATGACTCACATGATGGGGAGTCTGAATCAAATGC

CAAAGTAGCTGATGTATTGGACGTTCTAAATGAGGTAGATGAATATTCTGGTTCTTCAGAGAAAATAGACTTACTGGCCAGTGATCCTCATGAGGCTTTAATATGTAAAAGTG

AAAGAGTTCACTCCAAATCAGTAGAGAGTAATATTGAAGACAAAATATTTGGGAAAACCTATCGGAAGAAGGCAAGCCTCCCCAACTTAAGCCATGTAACTGAAAATCTAA

TTATAGGAGCATTTGTTACTGAGCCACAGATAATACAAGAGCGTCCCCTCACAAATAAATTAAAGCGTAAAAGGAGACCTACATCAGGCCTTCATCCTGAGGATTTTATCAA

GAAAGCAGATTTGGCAGTTCAAAAGACTCCTGAAATGATAAATCAGGGAACTAACCAAACGGAGCAGAATGGTCAAGTGATGAATATTACTAATAGTGGTCATGAGAATAA

AACAAAAGGTGATTCTATTCAGAATGAGAAAAATCCTAACCCAATAGAATCACTCGAAAAAGAATCTGCTTTCAAAACGAAAGCTGAACCTATAAGCAGCAGTATAAGCAAT

ATGGAACTCGAATTAAATATCCACAATTCAAAAGCACCTAAAAAGAATAGGCTGAGGAGGAAGTCTTCTACCAGGCATATTCATGCGCTTGAACTAGTAGTCAGTAGAAATC

TAAGCCCACCTAATTGTACTGAATTGCAAATTGATAGTTGTTCTAGCAGTGAAGAGATAAAGAAAAAAAAGTACAACCAAATGCCAGTCAGGCACAGCAGAAACCTACAAC

TCATGGAAGGTAAAGAACCTGCAACTGGAGCCAAGAAGAGTAACAAGCCAAATGAACAGACAAGTAAAAGACATGACAGCGATACTTTCCCAGAGCTGAAGTTAACAAA

TGCACCTGGTTCTTTTACTAAGTGTTCAAATACCAGTGAACTTAAAGAATTTGTCAATCCTAGCCTTCCAAGAGAAGAAAAAGAAGAGAAACTAGAAACAGTTAAAGTGTCTA

ATAATGCTGAAGACCCCAAAGATCTCATGTTAAGTGGAGAAAGGGTTTTGCAAACTGAAAGATCTGTAGAGAGTAGCAGTATTTCATTGGTACCTGGTACTGATTATGGCAC

TCAGGAAAGTATCTCGTTACTGGAAGTTAGCACTCTAGGGAAGGCAAAAACAGAACCAAATAAATGTGTGAGTCAGTGTGCAGCATTTGAAAACCCCAAGGGACTAATTCA

TGGTTGTTCCAAAGATAATAGAAATGACACAGAAGGCTTTAAGTATCCATTGGGACATGAAGTTAACCACAGTCGGGAAACAAGCATAGAAATGGAAGAAAGTGAACTTGA

TGCTCAGTATTTGCAGAATACATTCAAGGTTTCAAAGCGCCAGTCATTTGCTCCGTTTTCAAATCCAGGAAATGCAGAAGAGGAATGTGCAACATTCTCTGCCCACTCTGGGT

CCTTAAAGAAACAAAGTCCAAAAGTCACTTTTGAATGTGAACAAAAGGAAGAAAATCAAGGAAAGAATGAGTCTAATATCAAGCCTGTACAGACAGTTAATATCACTGCAG

GCTTTCCTGTGGTTGGTCAGAAAGATAAGCCAGTTGATAATGCCAAATGTAGTATCAAAGGAGGCTCTAGGTTTTGTCTATCATCTCAGTTCAGAGGCAACGAAACTGGACT

CATTACTCCAAATAAACATGGACTTTTACAAAACCCATATCGTATACCACCACTTTTTCCCATCAAGTCATTTGTTAAAACTAAATGTAAGAAAAATCTGCTAGAGGAAAACTTT

GAGGAACATTCAATGTCACCTGAAAGAGAAATGGGAAATGAGAACATTCCAAGTACAGTGAGCACAATTAGCCGTAATAACATTAGAGAAAATGTTTTTAAAGAAGCCAGC

TCAAGCAATATTAATGAAGTAGGTTCCAGTACTAATGAAGTGGGCTCCAGTATTAATGAAATAGGTTCCAGTGATGAAAACATTCAAGCAGAACTAGGTAGAAACAGAGGGC

CAAAATTGAATGCTATGCTTAGATTAGGGGTTTTGCAACCTGAGGTCTATAAACAAAGTCTTCCTGGAAGTAATTGTAAGCATCCTGAAATAAAAAAGCAAGAATATGAAGAA

GTAGTTCAGACTGTTAATACAGATTTCTCTCCATATCTGATTTCAGATAACTTAGAACAGCCTATGGGAAGTAGTCATGCATCTCAGGTTTGTTCTGAGACACCTGATGACCTGT

TAGATGATGGTGAAATAAAGGAAGATACTAGTTTTGCTGAAAATGACATTAAGGAAAGTTCTGCTGTTTTTAGCAAAAGCGTCCAGAAAGGAGAGCTTAGCAGGAGTCCTAG

CCCTTTCACCCATACACATTTGGCTCAGGGTTACCGAAGAGGGGCCAAGAAATTAGAGTCCTCAGAAGAGAACTTATCTAGTGAGGATGAAGAGCTTCCCTGCTTCCAACAC

TTGTTATTTGGTAAAGTAAACAATATACCTTCTCAGTCTACTAGGCATAGCACCGTTGCTACCGAGTGTCTGTCTAAGAACACAGAGGAGAATTTATTATCATTGAAGAATAGCT

TAAATGACTGCAGTAACCAGGTAATATTGGCAAAGGCATCTCAGGAACATCACCTTAGTGAGGAAACAAAATGTTCTGCTAGCTTGTTTTCTTCACAGTGCAGTGAATTGGAA

GACTTGACTGCAAATACAAACACCCAGGATCCTTTCTTGATTGGTTCTTCCAAACAAATGAGGCATCAGTCTGAAAGCCAGGGAGTTGGTCTGAGTGACAAGGAATTGGTTTC

AGATGATGAAGAAAGAGGAACGGGCTTGGAAGAAAATAATCAAGAAGAGCAAAGCATGGATTCAAACTTAGGTGAAGCAGCATCTGGGTGTGAGAGTGAAACAAGCGTCT

CTGAAGACTGCTCAGGGCTATCCTCTCAGAGTGACATTTTAACCACTCAGCAGAGGGATACCATGCAACATAACCTGATAAAGCTCCAGCAGGAAATGGCTGAACTAGAAG

CTGTGTTAGAACAGCATGGGAGCCAGCCTTCTAACAGCTACCCTTCCATCATAAGTGACTCTTCTGCCCTTGAGGACCTGCGAAATCCAGAACAAAGCACATCAGAAAAAGC

AGTATTAACTTCACAGAAAAGTAGTGAATACCCTATAAGCCAGAATCCAGAAGGCCTTTCTGCTGACAAGTTTGAGGTGTCTGCAGATAGTTCTACCAGTAAAAATAAAGAAC

CAGGAGTGGAAAGGTCATCCCCTTCTAAATGCCCATCATTAGATGATAGGTGGTACATGCACAGTTGCTCTGGGAGTCTTCAGAATAGAAACTACCCATCTCAAGAGGAGCT

CATTAAGGTTGTTGATGTGGAGGAGCAACAGCTGGAAGAGTCTGGGCCACACGATTTGACGGAAACATCTTACTTGCCAAGGCAAGATCTAGAGGGAACCCCTTACCTGGAA

TCTGGAATCAGCCTCTTCTCTGATGACCCTGAATCTGATCCTTCTGAAGACAGAGCCCCAGAGTCAGCTCGTGTTGGCAACATACCATCTTCAACCTCTGCATTGAAAGTTCCCC

AATTGAAAGTTGCAGAATCTGCCCAGAGTCCAGCTGCTGCTCATACTACTGATACTGCTGGGTATAATGCAATGGAAGAAAGTGTGAGCAGGGAGAAGCCAGAATTGACAGC

TTCAACAGAAAGGGTCAACAAAAGAATGTCCATGGTGGTGTCTGGCCTGACCCCAGAAGAATTTATGCTCGTGTACAAGTTTGCCAGAAAACACCACATCACTTTAACTAATCT

AATTACTGAAGAGACTACTCATGTTGTTATGAAAACAGATGCTGAGTTTGTGTGTGAACGGACACTGAAATATTTTCTAGGAATTGCGGGAGGAAAATGGGTAGTTAGCTATTTC

TGGGTGACCCAGTCTATTAAAGAAAGAAAAATGCTGAATGAGCATGATTTTGAAGTCAGAGGAGATGTGGTCAATGGAAGAAACCACCAAGGTCCAAAGCGAGCAAGAGAAT

CCCAGGACAGAAAGATCTTCAGGGGGCTAGAAATCTGTTGCTATGGGCCCTTCACCAACATGCCCACAGATCAACTGGAATGGATGGTACAGCTGTGTGGTGCTTCTGTGGTG

AAGGAGCTTTCATCATTCACCCTTGGCACAGGTGTCCACCCAATTGTGGTTGTGCAGCCAGATGCCTGGACAGAGGACAATGGCTTCCATGCAATTGGGCAGATGTGTGAGGC

ACCTGTGGTGACCCGAGAGTGGGTGTTGGACAGTGTAGCACTCTACCAGTGCCAGGAGCTGGACACCTACCTGATACCCCAGATCCCCCACAGCCACTACTGA

 

 

  <Protein>

MDLSALRVEEVQNVINAMQKILECPICLELIKEPVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSLQESTRFSQLVEELLKIICAFQLDTGLEYANSYNFAKKENNSPEHLKD

EVSIIQSMGYRNRAKRLLQSEPENPSLQETSLSVQLSNLGTVRTLRTKQRIQPQKTSVYIELGSDSSEDTVNKATYCSVGDQELLQITPQGTRDEISLDSAKKAACEFSETDVTNTEHH

QPSNNDLNTTEKRAAERHPEKYQGSSVSNLHVEPCGTNTHASSLQHENSSLLLTKDRMNVEKAEFCNKSKQPGLARSQHNRWAGSKETCNDRRTPSTEKKVDLNADPLCERKE

WNKQKLPCSENPRDTEDVPWITLNSSIQKVNEWFSRSDELLGSDDSHDGESESNAKVADVLDVLNEVDEYSGSSEKIDLLASDPHEALICKSERVHSKSVESNIEDKIFGKTYRKKAS

LPNLSHVTENLIIGAFVTEPQIIQERPLTNKLKRKRRPTSGLHPEDFIKKADLAVQKTPEMINQGTNQTEQNGQVMNITNSGHENKTKGDSIQNEKNPNPIESLEKESAFKTKAEPISS

SISNMELELNIHNSKAPKKNRLRRKSSTRHIHALELVVSRNLSPPNCTELQIDSCSSSEEIKKKKYNQMPVRHSRNLQLMEGKEPATGAKKSNKPNEQTSKRHDSDTFPELKLTNAP

GSFTKCSNTSELKEFVNPSLPREEKEEKLETVKVSNNAEDPKDLMLSGERVLQTERSVESSSISLVPGTDYGTQESISLLEVSTLGKAKTEPNKCVSQCAAFENPKGLIHGCSKDNRND

TEGFKYPLGHEVNHSRETSIEMEESELDAQYLQNTFKVSKRQSFAPFSNPGNAEEECATFSAHSGSLKKQSPKVTFECEQKEENQGKNESNIKPVQTVNITAGFPVVGQKDKPVDNA

KCSIKGGSRFCLSSQFRGNETGLITPNKHGLLQNPYRIPPLFPIKSFVKTKCKKNLLEENFEEHSMSPEREMGNENIPSTVSTISRNNIRENVFKEASSSNINEVGSSTNEVGSSINEIGS

SDENIQAELGRNRGPKLNAMLRLGVLQPEVYKQSLPGSNCKHPEIKKQEYEEVVQTVNTDFSPYLISDNLEQPMGSSHASQVCSETPDDLLDDGEIKEDTSFAENDIKESSAVFSKS

VQKGELSRSPSPFTHTHLAQGYRRGAKKLESSEENLSSEDEELPCFQHLLFGKVNNIPSQSTRHSTVATECLSKNTEENLLSLKNSLNDCSNQVILAKASQEHHLSEETKCSASLFSSQ

CSELEDLTANTNTQDPFLIGSSKQMRHQSESQGVGLSDKELVSDDEERGTGLEENNQEEQSMDSNLGEAASGCESETSVSEDCSGLSSQSDILTTQQRDTMQHNLIKLQQEMAE

LEAVLEQHGSQPSNSYPSIISDSSALEDLRNPEQSTSEKAVLTSQKSSEYPISQNPEGLSADKFEVSADSSTSKNKEPGVERSSPSKCPSLDDRWYMHSCSGSLQNRNYPSQEELIKV

VDVEEQQLEESGPHDLTETSYLPRQDLEGTPYLESGISLFSDDPESDPSEDRAPESARVGNIPSSTSALKVPQLKVAESAQSPAAAHTTDTAGYNAMEESVSREKPELTASTERVNKR

MSMVVSGLTPEEFMLVYKFARKHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQSIKERKMLNEHDFEVRGDVVNGRNHQGPKRARESQDRKIFRGLE

ICCYGPFTNMPTDQLEWMVQLCGASVVKELSSFTLGTGVHPIVVVQPDAWTEDNGFHAIGQMCEAPVVTREWVLDSVALYQCQELDTYLIPQIPHSHY*

 

 

  <Structure>

http://www.compbio.dundee.ac.uk/jpred4/results/jp_pOWsY7j/jp_pOWsY7j.simple.html

http://www.compbio.dundee.ac.uk/jpred4/results/jp_U3PpvGT/jp_U3PpvGT.simple.html

http://www.compbio.dundee.ac.uk/jpred4/results/jp_cbRrRrH/jp_cbRrRrH.simple.html

Contents

H: Alpha helix, E: Beta sheet
-----HHHHHHHHHHHHHHHH-------HH------------HHHHHHHHHHHH-----------------------HHHHHHHHHHHHHHHH----------------------HHH--

--EEEE------HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH----EEEEEE----HHHHHHHHHHHHHHHHH-----HHHHHHHHHH-HHHHHH---------------

-------HHHHHHHH----------------------------------EEE----------------------------------------------EEE-------------------

-----------HHHHHHHHHHHHHHHH---------------------------------------------------EEEE----------------EEEEEEEE--------------

----------------------------------------EEEEE-------------------EEEE----------------------------------------------------

----------------------EEE-----------------------------------------------------------------------------------------------

--------------EEE----------HHHHH----------------EEEE----------EEEE------------------EEEE--------------------------------HHH----------HHHHHHHHHH--

----------------EEE--------------------HHHHH----------------------------------EEEEE-----------------E---------------------EEEEE--------------------EE---------------------------------

-----------EEEE------EEE-------EE---------------------------EE------EEEE-----------------------------------------------------EEEEE------E-----------------------------------------HHH

HHH----------------EEEE----------------------------------------------------HH--------------------------------------------------------------EEE--------

--------------HHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------------EEE-----------------------------------------

------------------------------------------------------------------------------------------------------------------------

------------------------------EEEEEEE----HHHHHHHHHHHH---EEE--------EEEEE------EHHHHHHHHHHH-------HHHHHHHHHH---------E---

----------HHHHHHH---------EEEEEE------HHHHHHHHHH---EEE-------------EEEEEE-----HHHHHHHHHH-----EE-HHHHHHHHHH-------------------
 

 

 

 

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