Difference between revisions of "BLM"

From Biolecture.org
imported>Youyoung Kim
imported>Youyoung Kim
 
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<p><a href="http://www.compbio.dundee.ac.uk/jpred4/results/jp_jfn9Qp9/jp_jfn9Qp9.simple.html">http://www.compbio.dundee.ac.uk/jpred4/results/jp_jfn9Qp9/jp_jfn9Qp9.simple.html</a></p>
 
<p><a href="http://www.compbio.dundee.ac.uk/jpred4/results/jp_jfn9Qp9/jp_jfn9Qp9.simple.html">http://www.compbio.dundee.ac.uk/jpred4/results/jp_jfn9Qp9/jp_jfn9Qp9.simple.html</a></p>
  
<p>&nbsp;</p>
+
<p><a href="http://www.compbio.dundee.ac.uk/jpred4/results/jp_eGtPLbZ/jp_eGtPLbZ.simple.html">http://www.compbio.dundee.ac.uk/jpred4/results/jp_eGtPLbZ/jp_eGtPLbZ.simple.html</a></p>
  
 
<p>&nbsp;</p>
 
<p>&nbsp;</p>
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<pre>
 
<pre>
 
<code>H: Alpha helix, E: Beta sheet
 
<code>H: Alpha helix, E: Beta sheet
-HHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHH--------------------------------------------------------------------------------------------------------------------------------------------------------HHHHHHH--------------------------------------------------------------------------------HHHHHHHHHHH--------HHHHHHHHHH----EEEEE------HHHHHH----------------HHHHHHHHHHHHHHHHHHH---------EEEHHHHH------EEEE----EEE----HHHHHHHHHHH----HEEEHHHHHHHH-------HHHHHHHHH-------EEEE------HHHHHHHHH-------EEEE-------EEEEEEE----HHHHHHHHHHHH------EEEEE--HHHHHHHHHHHHH----EEEE--------
+
-HHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHH--------------------------------------------------------------------------------------------------------------------------------------------------------HHHHHHH--------------------------------------------------------------------------------HHHHHHHHHHH--------HHHHHHHHHH----EEEEE------HHHHHH----------------HHHHHHHHHHHHHHHHHHH---------EEEHHHHH------EEEE----EEE----HHHHHHHHHHH----HEEEHHHHHHHH-------HHHHHHHHH-------EEEE------HHHHHHHHH-------EEEE-------EEEEEEE----HHHHHHHHHHHH------EEEEE--HHHHHHHHHHHHH----EEEE--------</code><code>--HHHHHHH-----EEEEEE------------EEEEE------HHHHHHHH----------EEEEE----HHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------EEEE--HHHHHHHHHHHHH---HHEEEEEE--------HHHHEEEEE----HHHHHHH-------------HHHHHHHHHHHHHHHHHEE------EEEE--------------EEE--------------------------HHHHHHHHHHHHHHHH------EE---HHHHHHHHHHH---HHHHH------HHHHHHHHHHHHHHHHHHHHH-----------------------------------HHHHHHHHH-----HHHHH---------------------------------------------------------------------------
 
</code></pre>
 
</code></pre>
  

Latest revision as of 01:28, 14 June 2016


  <DNA>

ATGGAGCACATCTGTAAATTAATTGATACTATTCCTGATGATAAACTGAAACTTTTGGATTGTGGGAACGAACTGCTTCAGCAGCGGAACATAAGAAGGAAACTTCTAACGGAAGTAG

ATTTTAATAAAAGTGATGCCAGTCTTCTTGGCTCATTGTGGAGATACAGGCCTGATTCACTTGATGGCCCTATGGAGGGTGATTCCTGCCCTACAGGGAATTCTATGAAGGAGTTAAAT

TTTTCACACCTTCCCTCAAATTCTGTTTCTCCTGGGGACTGTTTACTGACTACCACCCTAGGAAAGACAGGATTCTCTGCCACCAGGAAGAATCTTTTTGAAAGGCCTTTATTCAATACC

CATTTACAGAAGTCCTTTGTAAGTAGCAACTGGGCTGAAACACCAAGACTAGGAAAAAAAAATGAAAGCTCTTATTTCCCAGGAAATGTTCTCACAAGCACTGCTGTGAAAGATCAG

AATAAACATACTGCTTCAATAAATGACTTAGAAAGAGAAACCCAACCTTCCTATGATATTGATAATTTTGACATAGATGACTTTGATGATGATGATGACTGGGAAGACATAATGCATAA

TTTAGCAGCCAGCAAATCTTCCACAGCTGCCTATCAACCCATCAAGGAAGGTCGGCCAATTAAATCAGTATCAGAAAGACTTTCCTCAGCCAAGACAGACTGTCTTCCAGTGTCATCT

ACTGCTCAAAATATAAACTTCTCAGAGTCAATTCAGAATTATACTGACAAGTCAGCACAAAATTTAGCATCCAGAAATCTGAAACATGAGCGTTTCCAAAGTCTTAGTTTTCCTCATAC

AAAGGAAATGATGAAGATTTTTCATAAAAAATTTGGCCTGCATAATTTTAGAACTAATCAGCTAGAGGCGATCAATGCTGCACTGCTTGGTGAAGACTGTTTTATCCTGATGCCGACTG

GAGGTGGTAAGAGTTTGTGTTACCAGCTCCCTGCCTGTGTTTCTCCTGGGGTCACTGTTGTCATTTCTCCCTTGAGATCACTTATCGTAGATCAAGTCCAAAAGCTGACTTCCTTGGAT

ATTCCAGCTACATATCTGACAGGTGATAAGACTGACTCAGAAGCTACAAATATTTACCTCCAGTTATCAAAAAAAGACCCAATCATAAAACTTCTATATGTCACTCCAGAAAAGATCTG

TGCAAGTAACAGACTCATTTCTACTCTGGAGAATCTCTATGAGAGGAAGCTCTTGGCACGTTTTGTTATTGATGAAGCACATTGTGTCAGTCAGTGGGGACATGATTTTCGTCAAGATT

ACAAAAGAATGAATATGCTTCGCCAGAAGTTTCCTTCTGTTCCGGTGATGGCTCTTACGGCCACAGCTAATCCCAGGGTACAGAAGGACATCCTGACTCAGCTGAAGATTCTCAGAC

CTCAGGTGTTTAGCATGAGCTTTAACAGACATAATCTGAAATACTATGTATTACCGAAAAAGCCTAAAAAGGTGGCATTTGATTGCCTAGAATGGATCAGAAAGCACCACCCATATGA

TTCAGGGATAATTTACTGCCTCTCCAGGCGAGAATGTGACACCATGGCTGACACGTTACAGAGAGATGGGCTCGCTGCTCTTGCTTACCATGCTGGCCTCAGTGATTCTGCCAGAGA

TGAAGTGCAGCAGAAGTGGATTAATCAGGATGGCTGTCAGGTTATCTGTGCTACAATTGCATTTGGAATGGGGATTGACAAACCGGACGTGCGATTTGTGATTCATGCATCTCTCCC

TAAATCTGTGGAGGGTTACTACCAAGAATCTGGCAGAGCTGGAAGAGATGGGGAAATATCTCACTGCCTGCTTTTCTATACCTATCATGATGTGACCAGACTGAAAAGACTTATAATG

ATGGAAAAAGATGGAAACCATCATACAAGAGAAACTCACTTCAATAATTTGTATAGCATGGTACATTACTGTGAAAATATAACGGAATGCAGGAGAATACAGCTTTTGGCCTACTTTG

GTGAAAATGGATTTAATCCTGATTTTTGTAAGAAACACCCAGATGTTTCTTGTGATAATTGCTGTAAAACAAAGGATTATAAAACAAGAGATGTGACTGACGATGTGAAAAGTATTGTA

AGATTTGTTCAAGAACATAGTTCATCACAAGGAATGAGAAATATAAAACATGTAGGTCCTTCTGGAAGATTTACTATGAATATGCTGGTCGACATTTTCTTGGGGAGTAAGAGTGCAA

AAATCCAGTCAGGTATATTTGGAAAAGGATCTGCTTATTCACGACACAATGCCGAAAGACTTTTTAAAAAGCTGATACTTGACAAGATTTTGGATGAAGACTTATATATCAATGCCAAT

GACCAGGCGATCGCTTATGTGATGCTCGGAAATAAAGCCCAAACTGTACTAAATGGCAATTTAAAGGTAGACTTTATGGAAACAGAAAATTCCAGCAGTGTGAAAAAACAAAAAGC

GTTAGTAGCAAAAGTGTCTCAGAGGGAAGAGATGGTTAAAAAATGTCTTGGAGAACTTACAGAAGTCTGCAAATCTCTGGGGAAAGTTTTTGGTGTCCATTACTTCAATATTTTTAATA

CCGTCACTCTCAAGAAGCTTGCAGAATCTTTATCTTCTGATCCTGAGGTTTTGCTTCAAATTGATGGTGTTACTGAAGACAAACTGGAAAAATATGGTGCGGAAGTGATTTCAGTATTA

CAGAAATACTCTGAATGGACATCGCCAGCTGAAGACAGTTCCCCAGGGATAAGCCTGTCCAGCAGCAGAGGCCCCGGAAGAAGTGCCGCTGAGGAGCTCGACGAGGAAATACC

CGTATCTTCCCACTACTTTGCAAGTAAAACCAGAAATGAAAGGAAGAGGAAAAAGATGCCAGCCTCCCAAAGGTCTAAGAGGAGAAAAACTGCTTCCAGTGGTTCCAAGGCAAAG

GGGGGGTCTGCCACATGTAGAAAGATATCTTCCAAAACGAAATCCTCCAGCATCATTGGATCCAGTTCAGCCTCACATACTTCTCAAGCGACATCAGGAGCCAATAGCAAATTGGG

GATTATGGCTCCACCGAAGCCTATAAATAGACCGTTTCTTAAGCCTTCATATGCATTCTCATAA

 

  <Protein>

MEHICKLIDTIPDDKLKLLDCGNELLQQRNIRRKLLTEVDFNKSDASLLGSLWRYRPDSLDGPMEGDSCPTGNSMKELNFSHLPSNSVSPGDCLLTTTLGKTGFSATRKNLFERPLFNTHL

QKSFVSSNWAETPRLGKKNESSYFPGNVLTSTAVKDQNKHTASINDLERETQPSYDIDNFDIDDFDDDDDWEDIMHNLAASKSSTAAYQPIKEGRPIKSVSERLSSAKTDCLPVSSTAQNI

NFSESIQNYTDKSAQNLASRNLKHERFQSLSFPHTKEMMKIFHKKFGLHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACVSPGVTVVISPLRSLIVDQVQKLTSLDIPATYLTGD

KTDSEATNIYLQLSKKDPIIKLLYVTPEKICASNRLISTLENLYERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANPRVQKDILTQLKILRPQVFSMSFNRHNL

KYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGR

DGEISHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNPDFCKKHPDVSCDNCCKTKDYKTRDVTDDVKSIVRFVQEHSSSQGMRNIK

HVGPSGRFTMNMLVDIFLGSKSAKIQSGIFGKGSAYSRHNAERLFKKLILDKILDEDLYINANDQAIAYVMLGNKAQTVLNGNLKVDFMETENSSSVKKQKALVAKVSQREEMVKKCLGE

LTEVCKSLGKVFGVHYFNIFNTVTLKKLAESLSSDPEVLLQIDGVTEDKLEKYGAEVISVLQKYSEWTSPAEDSSPGISLSSSRGPGRSAAEELDEEIPVSSHYFASKTRNERKRKKMPASQRSK

RRKTASSGSKAKGGSATCRKISSKTKSSSIIGSSSASHTSQATSGANSKLGIMAPPKPINRPFLKPSYAFS*

 

 

  <Structure>

http://www.compbio.dundee.ac.uk/jpred4/results/jp_jfn9Qp9/jp_jfn9Qp9.simple.html

http://www.compbio.dundee.ac.uk/jpred4/results/jp_eGtPLbZ/jp_eGtPLbZ.simple.html

 

<code>H: Alpha helix, E: Beta sheet
-HHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHH--------------------------------------------------------------------------------------------------------------------------------------------------------HHHHHHH--------------------------------------------------------------------------------HHHHHHHHHHH--------HHHHHHHHHH----EEEEE------HHHHHH----------------HHHHHHHHHHHHHHHHHHH---------EEEHHHHH------EEEE----EEE----HHHHHHHHHHH----HEEEHHHHHHHH-------HHHHHHHHH-------EEEE------HHHHHHHHH-------EEEE-------EEEEEEE----HHHHHHHHHHHH------EEEEE--HHHHHHHHHHHHH----EEEE--------</code><code>--HHHHHHH-----EEEEEE------------EEEEE------HHHHHHHH----------EEEEE----HHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------EEEE--HHHHHHHHHHHHH---HHEEEEEE--------HHHHEEEEE----HHHHHHH-------------HHHHHHHHHHHHHHHHHEE------EEEE--------------EEE--------------------------HHHHHHHHHHHHHHHH------EE---HHHHHHHHHHH---HHHHH------HHHHHHHHHHHHHHHHHHHHH-----------------------------------HHHHHHHHH-----HHHHH---------------------------------------------------------------------------
</code>