Difference between revisions of "Transforming DNA sequences into Amino acid sequences by using Perl programming"

From Biolecture.org
imported>S
(Created page with "<p><span style="font-size:20px">1. Learn Perl programming language and learn bioinformatics using it.</span></p> <p>a. Install and Learn BioPerl<br /> [[b. Make a Perl ...")
 
imported>S
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
<p><span style="font-size:20px">1.&nbsp;Learn Perl programming language and learn bioinformatics using it.</span></p>
+
<p><img alt="" src="/ckfinder/userfiles/images/translation(1).PNG" style="height:509px; width:651px" /></p>
  
<p>[[a. Install and Learn BioPerl]]<br />
+
<p>&nbsp;</p>
[[b. Make a Perl program translating &#39;all&#39; combinations of triple bases into amino acids]]<br />
 
[[c. Pick 5 protein sequences and predict their secondary structures using available prediction programs]]<br />
 
[[d. Open and re-write one FASTA file containing one protein sequence of TERT]]<br />
 
[[e. Create a FASTA file with a sequence. Open it and reverse the sequence of it and print it out in another FASTA file]]<br />
 
[[f. Extract a sequence MKKTGIKG from ASMKATAHQMKKTGIKGMSTYALLRL and print it out in a file]]<br />
 
[[g. In a multi-sequence FASTA file, produce statistics such as sequence number, average seq length, GC content, AT content, etc]]<br />
 
[[h. Align two protein sequences using a dynamic programming method in Perl]]<br />
 
[[i. Randomly generate five 100 AA long protein sequences and store them in a FASTA file]]<br />
 
[[j. Create a flat text file database of protein sequences with hash function in Perl]]</p>
 

Latest revision as of 14:29, 18 June 2016