Changes

From Biolecture.org

Bioinformatics homework

447 bytes added, 14:42, 7 May 2018
no edit summary
<p><span style="font-size:20px"><strong>Jong Bhak&#39;s Bioinformatics homework </strong></span><span style="font-size:18px"><strong>(for any bioinforamtics students)</strong></span></p>
 
<p>&nbsp;</p>
<p><span style="font-size:18px"><strong>1. Learn [[Perl]] programming language and learn bioinformatics using it.</strong></span></p>
<li><span style="font-size:16px">[[Install and Learn BioPerl]]</span></li>
<li><span style="font-size:16px">[[Make a Perl program translating &#39;all&#39; combinations of triple bases into amino acids]]</span></li>
<li><span style="font-size:16px">[[Make a Perl program to calculate the lengths of DNA and protein sequences]]</span></li>
<li><span style="font-size:16px">[[Make a Perl program to calculate the length of a Mycoplasma genitalium bacterium]]</span></li>
<li><span style="font-size:16px">[[Pick 5 protein sequences and predict their secondary structures using available prediction programs]]</span></li>
<li><span style="font-size:16px">[[Open and re-write one FASTA file containing one protein sequence of TERT]]</span></li>
<ul>
<li>[[Access&nbsp;http://koreanreference.org/home/index.html and search for TERT_HUMAN DNA region]]</li>
<li><span style="font-size:16px">[[Install a sequence alignment viewer program on your computer]]</span></li>
<li><span style="font-size:16px">[[Install a protein 3D structure viewer program on your computer]]</span></li>
<li>[[Download TERT_HUMAN sequence and search for 3D structure of it and build a 3D model using bat&#39;s TERT homolog sequence using the human 3D template]]</li>
<li>[[Access http://string-db.org/&nbsp; and find all the interaction partners of TERT_HUMAN protein]]</li>
<li>[[How to use NCBI database to construct a protein sequence]]</li>
</ul>
Anonymous user

Navigation menu